From af8ae1f488d17c8c10c94eacbe0e928d321b90e9 Mon Sep 17 00:00:00 2001 From: Daniel Weindl Date: Mon, 2 Feb 2026 08:53:17 +0100 Subject: [PATCH] CI: Update diffrax branch `dev` is gone: https://github.com/patrick-kidger/diffrax/branches/all?query=dev --- .github/workflows/test_benchmark_collection_models.yml | 2 +- scripts/installAmiciSource.sh | 2 +- 2 files changed, 2 insertions(+), 2 deletions(-) diff --git a/.github/workflows/test_benchmark_collection_models.yml b/.github/workflows/test_benchmark_collection_models.yml index 3663051eb3..048d7f59a4 100644 --- a/.github/workflows/test_benchmark_collection_models.yml +++ b/.github/workflows/test_benchmark_collection_models.yml @@ -132,7 +132,7 @@ jobs: && python3 -m pip install -U sympy \ && python3 -m pip install git+https://github.com/ICB-DCM/fiddy.git@amici100 - - run: pip uninstall -y diffrax && pip install git+https://github.com/patrick-kidger/diffrax@dev # TODO FIXME https://github.com/patrick-kidger/diffrax/issues/654 + event dirs + - run: pip uninstall -y diffrax && pip install git+https://github.com/patrick-kidger/diffrax@main # TODO FIXME https://github.com/patrick-kidger/diffrax/issues/654 + event dirs - name: Download benchmark collection run: | diff --git a/scripts/installAmiciSource.sh b/scripts/installAmiciSource.sh index 807d85dcb7..4c416a5788 100755 --- a/scripts/installAmiciSource.sh +++ b/scripts/installAmiciSource.sh @@ -38,7 +38,7 @@ python -m pip install --upgrade pip wheel # The latter is necessary for code coverage to work. python -m pip install --upgrade pip setuptools cmake_build_extension==0.6.0 numpy petab swig python -m pip install git+https://github.com/pysb/pysb@master # for SPM with compartments -python -m pip install git+https://github.com/patrick-kidger/diffrax@dev # for events with direction +python -m pip install git+https://github.com/patrick-kidger/diffrax@main # for events with direction python -m pip install optax # for jax petab notebook AMICI_BUILD_TEMP="${AMICI_PATH}/python/sdist/build/temp" \ python -m pip install --verbose -e "${AMICI_PATH}/python/sdist[petab,test,vis,jax]" --no-build-isolation