Cannot change the settings for a alignment of other species than default.

[The-LittleScientist]

Hello, First of all I would like to say that the idea of EpicTope is really great, very good work!! And seems to be a really great prediction tool for protein modifications and internal tag insertions.

Actually I am trying to test if it works on my experimental model. But I am facing a problem where I cannot change the configuration for the species that I want to do the multiple sequence alignment. I have changed the name on "config_defaults.R" but it doesn't change the current species that it will be aligned, and the result still being aligned to "bos_taurus"; "homo_sapiens", etc.

Do you have any idea on how to solve this problem?
Thank you!!

[parnaljoshi]

Hi, after changing the species list in "config_defaults.R", you will have to run "install.R" so that the proteomes of your species of choice are downloaded. Hope this helps!