From 3bb9c7613ece9e07a3ae1d4d73fd7972d93946f0 Mon Sep 17 00:00:00 2001 From: unknown Date: Mon, 2 Mar 2026 23:27:26 +0200 Subject: [PATCH 1/2] fix: correct typos in documentation (resource, chromosome) --- define.yaml | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) diff --git a/define.yaml b/define.yaml index 12f3f45c..0d39fabb 100644 --- a/define.yaml +++ b/define.yaml @@ -214,7 +214,7 @@ classes: - range: string required: false validityPeriod: - description: Time period during which the resouce is valid + description: Time period during which the resource is valid range: Timing required: false @@ -2371,7 +2371,7 @@ enums: identifies the reference used in the genomic test in: indicates heritability of the genetic variant in: is an identifier for a published reference for the genetic variant in: - is an identifier for the copy, on one of two homologous chromosones, of the genetic variant in: + is an identifier for the copy, on one of two homologous chromosomes, of the genetic variant in: is an identifier for the genetic sequence of the genetic entity represented by: is the chromosome that is the position of the result in: is the clinical trial or treatment setting for: @@ -2379,7 +2379,7 @@ enums: is the date of occurrence for: is the intended disease outcome for: is the method of secondary analysis of results in: - is the numeric location, within a chromosone, genetic entity, or genetic sub-region, of the result in: + is the numeric location, within a chromosome, genetic entity, or genetic sub-region, of the result in: is the symbol for the genomic entity that is the position of the result in: is the type of genomic entity that is the position of the result in: is the genetic sub-location of the result in: From 2ecd580b8411c1342788f2f2e5ec865612312dc1 Mon Sep 17 00:00:00 2001 From: ankonyeni Date: Sun, 15 Mar 2026 16:07:04 +0200 Subject: [PATCH 2/2] Encode operator default in LinkML ifabsent metaslot --- define.yaml | 2 ++ 1 file changed, 2 insertions(+) diff --git a/define.yaml b/define.yaml index 0d39fabb..a8c6b11c 100644 --- a/define.yaml +++ b/define.yaml @@ -982,6 +982,7 @@ classes: Defaults to ALL if not specified. range: LogicalOperator required: false + ifabsent: LogicalOperator(AND) conditions: description: >- Child conditions to combine using the operator. @@ -1035,6 +1036,7 @@ classes: Defaults to ALL if not specified. range: LogicalOperator required: false + ifabsent: LogicalOperator(AND) FormalExpression: description: >-