From ad3a9e7a07e9ae36856f9b94758c4b780a3d0cb8 Mon Sep 17 00:00:00 2001 From: Zequn Date: Sun, 31 Aug 2025 15:43:28 +0300 Subject: [PATCH 1/3] Refactor code structure for improved readability and maintainability --- .pre-commit-config.yaml | 75 ++- Dockerfile | 60 +- Makefile | 32 - README.md | 58 +- Taskfile.yml | 16 +- docker-compose.yml | 5 +- poetry.lock | 1383 --------------------------------------- pyproject.toml | 43 +- uv.lock | 1055 +++++++++++++++++++++++++++++ 9 files changed, 1201 insertions(+), 1526 deletions(-) delete mode 100644 Makefile delete mode 100644 poetry.lock create mode 100644 uv.lock diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml index 228c786..fa42b6c 100644 --- a/.pre-commit-config.yaml +++ b/.pre-commit-config.yaml @@ -1,32 +1,57 @@ # See https://pre-commit.com for more information # See https://pre-commit.com/hooks.html for more hooks repos: -- repo: https://github.com/pre-commit/pre-commit-hooks - rev: v5.0.0 + # Standard pre-commit hooks + - repo: https://github.com/pre-commit/pre-commit-hooks + rev: v6.0.0 hooks: - - id: trailing-whitespace - - id: end-of-file-fixer - - id: check-yaml - - id: check-toml - - id: check-added-large-files + - id: trailing-whitespace + - id: end-of-file-fixer + - id: check-yaml + - id: check-added-large-files + - id: check-merge-conflict + - id: check-toml + - id: debug-statements -- repo: local + # Ruff for Python linting and formatting + - repo: https://github.com/astral-sh/ruff-pre-commit + # Ruff version. + rev: v0.12.11 hooks: - - id: ruff-linter - name: ruff-linter - entry: task linter - files: ./src - language: system - always_run: true - - id: ruff-formatter - name: ruff-formatter - entry: task formatter - files: ./src - language: system - always_run: true - - id: mypy-checker - name: mypy-checker - entry: task checker - files: ./src + # Run the linter. + - id: ruff-check + args: [--fix] + # Run the formatter. + - id: ruff-format + + # UV for dependency management + - repo: https://github.com/astral-sh/uv-pre-commit + # uv version. + rev: 0.8.14 + hooks: + # Make sure uv.lock is up to date + - id: uv-lock + name: "uv - lock dependencies" + description: "Update uv.lock if pyproject.toml dependencies changed" + + # Local hooks for custom checks + - repo: local + hooks: + # Check for dependency updates (informational only) + - id: check-dependency-updates + name: "Check for dependency updates" + entry: bash language: system - always_run: true + args: + - -c + - | + echo "🔍 Checking for dependency updates..." + echo "Current dependency constraints:" + grep -A 10 "^dependencies" pyproject.toml || true + echo "" + echo "💡 To upgrade dependencies within constraints, run: uv sync --upgrade" + echo "💡 To check for newer versions, run: uv tree --outdated (when available)" + echo "💡 Remember to update ~= constraints in pyproject.toml for new minor versions" + files: ^pyproject\.toml$ + pass_filenames: false + always_run: false diff --git a/Dockerfile b/Dockerfile index 5ae9214..1f2d3d8 100644 --- a/Dockerfile +++ b/Dockerfile @@ -1,38 +1,47 @@ # Multi-stage build -FROM python:3.10.6-slim as base +FROM python:3.12-slim AS base + +ARG UV_VERSION=0.8.14 ENV PYTHONFAULTHANDLER=1 \ PYTHONHASHSEED=random \ # Keeps Python from generating .pyc files in the container PYTHONDONTWRITEBYTECODE=1 \ # Turns off buffering for easier container logging - PYTHONUNBUFFERED=1 \ - POETRY_CACHE_DIR=/tmp/poetry_cache + PYTHONUNBUFFERED=1 # WORKDIR /app -FROM base as builder +FROM base AS builder + +ENV UV_VERSION=${UV_VERSION} \ + UV_COMPILE_BYTECODE=1 \ + UV_LINK_MODE=copy -ENV PIP_DEFAULT_TIMEOUT=100 \ - PIP_DISABLE_PIP_VERSION_CHECK=1 \ - PIP_NO_CACHE_DIR=1 \ - POETRY_VERSION=1.7.1 +# Disable Python downloads, because we want to use the system interpreter +# across both images. If using a managed Python version, it needs to be +# copied from the build image into the final image; see `standalone.Dockerfile` +# for an example. +ENV UV_PYTHON_DOWNLOADS=0 -# Install poetry -RUN pip install "poetry==$POETRY_VERSION" +# Install uv +RUN pip install --no-cache-dir "uv==${UV_VERSION}" -# Copy poetry dependency files to container -COPY pyproject.toml poetry.lock / +# Copy shared library files to container +COPY lib/ /lib/ +COPY common_libs/ /common_libs/ -ARG POETRY_INSTALL_OPTION="--only main" -# Install dependency -RUN poetry config virtualenvs.in-project true && \ - poetry install -vvv --no-root ${POETRY_INSTALL_OPTION} && \ - rm -rf $POETRY_CACHE_DIR +ARG DEPENDENCY_INSTALL_OPTION="--no-dev" +# Install Python dependencies +RUN --mount=type=cache,target=/root/.cache/uv \ + --mount=type=bind,source=uv.lock,target=uv.lock \ + --mount=type=bind,source=pyproject.toml,target=pyproject.toml \ + uv sync --frozen --no-install-project ${DEPENDENCY_INSTALL_OPTION} -FROM base as final +FROM base AS final -ENV VIRTUAL_ENV=/.venv \ +ENV UV_VERSION=${UV_VERSION} \ + VIRTUAL_ENV=/.venv \ PATH="/.venv/bin:${PATH}" \ PYTHONPATH="/app/src/" @@ -41,11 +50,12 @@ WORKDIR /app # Copy installed Python dependencies to final container COPY --from=builder /.venv ${VIRTUAL_ENV} -# Keep the container running -CMD tail -f /dev/null +COPY --from=builder /lib/ /lib/ +COPY --from=builder /common_libs/ /common_libs/ -# Copy your code into container. e.g.: -# COPY /src /app +# Copy your code into container +COPY src/ /app/src/ -# Replace your enterpoint here. e.g: -# ENTRYPOINT ["python", "-m", "main"] +# This is needed to for running locally +ARG INSTALL_UV=false +RUN bash -c "if [ $INSTALL_UV == 'true' ] ; then pip install 'uv==$UV_VERSION' ; fi" diff --git a/Makefile b/Makefile deleted file mode 100644 index 7b91fa0..0000000 --- a/Makefile +++ /dev/null @@ -1,32 +0,0 @@ -activate-virtualenv: - poetry shell - -install-dependency: - poetry install - -checker: - poetry run mypy ./src --check-untyped-defs - -linter: - poetry run ruff check ./src - -formatter: - poetry run ruff check ./src --fix - -test: - poetry run pytest -sv ./src/test - -precommit: - poetry run pre-commit run - -docker-build: - docker build py-proj-template . - -docker-run: - docker run --name py-proj-template -itd py-proj-template - -docker-exec: - docker exec -it py-proj-template bash - -docker-stop: - docker stop py-proj-template diff --git a/README.md b/README.md index 4971a63..d16cabb 100644 --- a/README.md +++ b/README.md @@ -7,8 +7,7 @@ A template for **Python project**, equipped with best practices, can be used whe ## Highlights ### 🛠️ Reproducible development environment: -- Python version management tool: [pyenv](https://github.com/pyenv/pyenv) -- Python packaging and dependency management: [Poetry](https://python-poetry.org/) +- Python packaging and dependency management: [uv](https://docs.astral.sh/uv/) (handles Python installation and virtual environments) - Dockerfile: test and run codes within container - ~~Makefile: provides shortcuts to making life easier~~ Deprecated, replaced by Task - Task runner [Task](https://taskfile.dev/): easily run pre-defined tasks specified in configuration file [Taskfile.yml](./Taskfile.yml) @@ -45,41 +44,42 @@ A template for **Python project**, equipped with best practices, can be used whe ## Guidebook -### Create a reproducible Python development environment with *pyenv* and *Poetry* -Here I use a Python version management tool: [pyenv](https://github.com/pyenv/pyenv). -As a user, we can easily install and switch between different versions of Python. -You can install pyenv following [this link](https://github.com/pyenv/pyenv#getting-pyenv). +### Create a reproducible Python development environment with *uv* -[Poetry](https://python-poetry.org/) is a great tool for Python packaging and dependency management, as a user you can easily reproduce the development environment and update the packages when possible, especially when it is already being used - which is the case for this project. -You can install Poetry following [this link](https://python-poetry.org/docs/#installation), after setting the Python version as mentioned above. +[uv](https://docs.astral.sh/uv/) is an extremely fast Python package and project manager that handles both Python installation and dependency management. It's all you need to set up a reproducible development environment for this project. -Then we can create a Python virtual env as follows: -1. Install a specific verion of Python: -``` - # Install Python 3.10.6 as an example - pyenv install 3.10.6 -``` +You can install uv following [this link](https://docs.astral.sh/uv/getting-started/installation/). -**[Deprecated]**, use Poetry for setting virtual environment and dependency management +Setting up the development environment is simple: -~~2. Create a virtual env, with Python verison and customized name:~~ -``` - pyenv virtualenv -``` -~~3. After installation, you will be able to activate and deactivate the env:~~ -``` - # Activate - pyenv activate - # Deactivate - source deactivate +1. **Install Python and create virtual environment with dependencies:** +```bash +uv sync ``` -~~Activating your env to maintain a stable development environment.~~ -And then, you just need: +That's it! uv will automatically: +- Install Python 3.12+ if not available (as specified in `pyproject.toml`) +- Create a virtual environment in `.venv/` +- Install all project dependencies and development tools -2. Create a virtual environment and install dependency: +2. **Activate the virtual environment:** +```bash +source .venv/bin/activate ``` -poetry install + +3. **Run commands within the environment:** +```bash +# Run tests +uv run pytest ./src/test + +# Run linting +uv run ruff check + +# Add new dependencies +uv add + +# Add development dependencies +uv add --group dev ``` ## TODO diff --git a/Taskfile.yml b/Taskfile.yml index cf2d90e..1374bb4 100644 --- a/Taskfile.yml +++ b/Taskfile.yml @@ -7,38 +7,38 @@ tasks: linter-watch: desc: Run ruff linter in the watched mode. cmds: - - poetry run ruff check . --watch + - uv run ruff check . --watch linter: desc: Run ruff linter and fix the suggested changes. cmds: - - poetry run ruff check ./src --fix --verbose + - uv run ruff check ./src --fix --verbose formatter: desc: Run ruff formatter to clean up the codebase. cmds: - - poetry run ruff format ./src --verbose + - uv run ruff format ./src --verbose checker: desc: Run type checker. cmds: - - poetry run mypy ./src --check-untyped-defs + - uv run mypy ./src --check-untyped-defs run-test: desc: Run tests(unit, integration and more...) in TESTDIR(default=tests) folder dir: '{{ .USER_WORKING_DIR }}' cmds: - - poetry run pytest ./src/{{ .TESTDIR }} -sv --durations=0 + - uv run pytest ./src/{{ .TESTDIR }} -sv --durations=0 precommit: desc: Run pre-commit cmds: - - poetry run pre-commit run + - uv run pre-commit run check_updatable_libs: - desc: Run poetry to see if libs can be updated + desc: Run uv to see if libs can be updated cmds: - - poetry show --outdated --no-interaction + - uv tree --outdated dc-up: desc: Start docker compose services, given PROFILE=, BUILD=<--build>/<--no-build> diff --git a/docker-compose.yml b/docker-compose.yml index fd2e3cb..70c6d1e 100644 --- a/docker-compose.yml +++ b/docker-compose.yml @@ -1,12 +1,11 @@ services: pyproj: - profiles: - - pyproj build: context: . dockerfile: Dockerfile args: - - POETRY_INSTALL_OPTION=--with main + - DEPENDENCY_INSTALL_OPTION=--all-groups + - INSTALL_UV=true stdin_open: true tty: true user: root diff --git a/poetry.lock b/poetry.lock deleted file mode 100644 index 44b1c0c..0000000 --- a/poetry.lock +++ /dev/null @@ -1,1383 +0,0 @@ -# This file is automatically @generated by Poetry 1.7.1 and should not be changed by hand. - 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instead of Poetry-specific format +- Updated Docker configuration to use uv instead of Poetry +- Updated all task runner commands in `Taskfile.yml` to use `uv run` instead of `poetry run` +- Updated pre-commit configuration to use direct ruff and uv integrations +- Updated Python base image in Dockerfile from 3.10.6-slim to 3.12-slim +- Updated README.md documentation to reflect uv usage and simplified setup process + +### Added +- uv pre-commit hook for automatic dependency lock file updates +- Enhanced Docker build with better caching and optimization +- Dependency update checking in pre-commit hooks + +### Removed +- Poetry dependency management (`poetry.lock` removed, replaced with `uv.lock`) +- Makefile (already deprecated in favor of `Taskfile.yml`) +- pyenv references from documentation (uv handles Python installation) + +### Fixed +- Docker container now properly copies source code and sets up environment +- Improved development environment reproducibility with uv + +## [0.0.3] - 2024-11-16 Added: - Github Workflow: CI, runs for PR - Add [pyupgrade](https://github.com/asottile/pyupgrade) for ruff diff --git a/Dockerfile b/Dockerfile index 1f2d3d8..bb88394 100644 --- a/Dockerfile +++ b/Dockerfile @@ -27,10 +27,6 @@ ENV UV_PYTHON_DOWNLOADS=0 # Install uv RUN pip install --no-cache-dir "uv==${UV_VERSION}" -# Copy shared library files to container -COPY lib/ /lib/ -COPY common_libs/ /common_libs/ - ARG DEPENDENCY_INSTALL_OPTION="--no-dev" # Install Python dependencies RUN --mount=type=cache,target=/root/.cache/uv \ @@ -50,9 +46,6 @@ WORKDIR /app # Copy installed Python dependencies to final container COPY --from=builder /.venv ${VIRTUAL_ENV} -COPY --from=builder /lib/ /lib/ -COPY --from=builder /common_libs/ /common_libs/ - # Copy your code into container COPY src/ /app/src/ diff --git a/pyproject.toml b/pyproject.toml index ceae7db..87c28e1 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -1,6 +1,6 @@ [project] name = "python-project-template" -version = "0.1.0" +version = "0.2.0" description = "" authors = [ {name = "ZequnZ", email = "zequn.zhou007@gmail.com"} From 790a7262c9b4e4b22bfaa5672ebac3182b0e6afe Mon Sep 17 00:00:00 2001 From: Zequn Date: Sun, 31 Aug 2025 15:58:25 +0300 Subject: [PATCH 3/3] feat: update ci --- .github/workflows/ci.yml | 74 ++++++++++++++++------------------------ Changelog.md | 1 + 2 files changed, 31 insertions(+), 44 deletions(-) diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml index 73837b1..a17d443 100644 --- a/.github/workflows/ci.yml +++ b/.github/workflows/ci.yml @@ -10,8 +10,8 @@ jobs: strategy: fail-fast: false matrix: - python-version: ["3.10"] - poetry-version: ["1.7.1"] + python-version: ["3.12"] + uv-version: ["0.8.14"] os: [ubuntu-latest, macos-latest] runs-on: ${{ matrix.os }} @@ -21,34 +21,33 @@ jobs: with: python-version: ${{ matrix.python-version }} + - name: Install uv + uses: astral-sh/setup-uv@v4 + with: + version: ${{ matrix.uv-version }} + - name: Install Task uses: arduino/setup-task@v2 with: version: 3.38.0 - - name: Install poetry - uses: abatilo/actions-poetry@v2 - with: - poetry-version: ${{ matrix.poetry-version }} - - - name: Setup a local virtual environment (if no poetry.toml file) - run: | - poetry config virtualenvs.create true --local - poetry config virtualenvs.in-project true --local - - uses: actions/cache@v4 - name: Define a cache for the virtual environment based on the dependencies lock file + name: Cache uv dependencies with: - path: ./.venv - key: venv-${{ hashFiles('poetry.lock') }} + path: | + ~/.cache/uv + .venv + key: ${{ runner.os }}-uv-${{ hashFiles('uv.lock') }} + restore-keys: | + ${{ runner.os }}-uv- - - name: Install the project dependencies - run: poetry install + - name: Install dependencies + run: uv sync --all-groups - uses: pre-commit/action@v3.0.1 - name: Run the automated tests(using pytest) - run: poetry run pytest ./src/test -sv --durations=0 + run: uv run pytest ./src/test -sv --durations=0 - uses: pyupio/safety-action@v1 if: runner.os == 'Linux' @@ -57,31 +56,18 @@ jobs: api-key: ${{ secrets.SAFETY_API_KEY }} args: --detailed-output # To always see detailed output from this action - - name: Gather updatable dependencies - id: gather_updatable_dependencies - run: | - UPDATE_DETAILS="library, current_version -> latest_version:\n" - - # Directly reading from poetry show --outdated without a pipe - while IFS= read -r line; do - # Parse the line into variables - IFS=' ' read -r library current_version latest_version extra_info <<< "$line" - # Append the details to UPDATE_DETAILS - UPDATE_DETAILS="${UPDATE_DETAILS}${library}, ${current_version} -> ${latest_version}\n" - done < <(poetry show --outdated) # Using process substitution to feed poetry show output into the while loop - - UPDATE_DETAILS="${UPDATE_DETAILS:0:-2}" - { - echo "UPDATE_DETAILS<<\n" - echo "${UPDATE_DETAILS}" - echo "\n" - } >> "$GITHUB_OUTPUT" - - - name: Print updatable dependencies - if: ${{ steps.gather_updatable_dependencies.outputs.UPDATE_DETAILS != 0 }} - env: - UPDATE_DETAILS: ${{ steps.gather_updatable_dependencies.outputs.UPDATE_DETAILS }} + - name: Check for dependency updates + id: check_updates run: | - echo -e "$UPDATE_DETAILS" + echo "Checking for dependency updates..." + echo "Current dependency constraints:" + grep -A 10 "^dependencies" pyproject.toml || true + echo "" + echo "Current dev dependencies:" + grep -A 10 "^\[dependency-groups\]" pyproject.toml || true + echo "" + echo "💡 To upgrade dependencies within constraints, run: uv sync --upgrade" + echo "💡 To check for newer versions, manually review PyPI for each package" + echo "💡 Remember to update ~= constraints in pyproject.toml for new minor versions" -# ref: https://github.com/marketplace/actions/python-poetry-action +# ref: https://github.com/astral-sh/setup-uv diff --git a/Changelog.md b/Changelog.md index 25eca6c..47a126f 100644 --- a/Changelog.md +++ b/Changelog.md @@ -13,6 +13,7 @@ The format 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