diff --git a/cpp/main.cpp b/cpp/main.cpp index 97be280..20bc035 100644 --- a/cpp/main.cpp +++ b/cpp/main.cpp @@ -2,65 +2,91 @@ #include "biplanarSAT.h" #include "biplanarTester.h" +#include +#include +#include +#include + +using namespace std; + +static bool loadGraphFromFile(const string& path, vector& edges, int& n) { + ifstream in(path); + if (!in.is_open()) { + cerr << "Could not open file: " << path << ". Please check that it exists and is readable." << endl; + return false; + } + int u, v; + n = 0; + while (in >> u >> v) { + edges.emplace_back(u, v); + n = max(n, max(u, v) + 1); + } + if (edges.empty()) { + cerr << "File contained no edges or invalid format." << endl; + return false; + } + in.close(); + return true; +} + int main() { - ///////////////////////// - // Backtracking vs SAT // - ///////////////////////// - int n; vector edges; + cout << "Would you like to run biplanar tester (y/n)? "; + char choice; + if (!(cin >> choice)) return 0; + cin.ignore(numeric_limits::max(), '\n'); - int a = 5, b = 4; - n = a * b; - edges = strongProductEdge(pathGraphEdge(a), a, completeGraphEdge(b), b); - removeVertexEdges(edges, 0); + if (choice == 'y' || choice == 'Y') { + cout << "Path to file: "; + string path; + getline(cin, path); - auto start = chrono::high_resolution_clock::now(); - testBiplanarity(&edges, n); - auto end = chrono::high_resolution_clock::now(); - chrono::duration elapsed = end - start; - cout << "Took: " << elapsed.count() << " seconds.\n"; + int n; vector edges; + if (!path.empty()) { + if (!loadGraphFromFile(path, edges, n)) return 1; + } else { + cout << "No path provided. Running default test graph (5x4 strong product minus vertex 0)." << endl; + int a = 5, b = 4; + n = a * b; + edges = strongProductEdge(pathGraphEdge(a), a, completeGraphEdge(b), b); + removeVertexEdges(edges, 0); + } - start = chrono::high_resolution_clock::now(); - if (isBiplanarSAT(edges, n)) { - cout << "biplanar" << endl; + auto start = chrono::high_resolution_clock::now(); + testBiplanarity(&edges, n); + auto end = chrono::high_resolution_clock::now(); + chrono::duration elapsed = end - start; + cout << "Took: " << elapsed.count() << " seconds.\n"; + return 0; } - end = chrono::high_resolution_clock::now(); - chrono::duration elapsed2 = end - start; - cout << "Took: " << elapsed2.count() << " seconds.\n"; - - // n = 8; - // edges = completeGraphEdge(n); - // auto start = chrono::high_resolution_clock::now(); - // testBiplanarity(&edges, n); - // auto end = chrono::high_resolution_clock::now(); - // chrono::duration elapsed = end - start; - // cout << "Took: " << elapsed.count() << " seconds.\n"; + cout << "Would you like to run the candidate builder (y/n)? "; + char build; + if (!(cin >> build)) return 0; + cin.ignore(numeric_limits::max(), '\n'); + if (build != 'y' && build != 'Y') return 0; - // start = chrono::high_resolution_clock::now(); - // if (isBiplanarSAT(edges, n)) { - // cout << "biplanar" << endl; - // } - // end = chrono::high_resolution_clock::now(); - // chrono::duration elapsed2 = end - start; - // cout << "Took: " << elapsed2.count() << " seconds.\n"; + int low, high, attempts; + cout << "Enter lower number of vertices: "; + if (!(cin >> low)) return 0; + cout << "Enter higher number of vertices: "; + if (!(cin >> high)) return 0; + cout << "Enter number of candidates to build (attempts) per vertex count: "; + if (!(cin >> attempts)) return 0; + if (low > high || attempts <= 0 || low <= 0 || high <= 0) { + cerr << "Invalid numeric input. Ensure 0 < lower <= higher and attempts > 0." << endl; + return 1; + } - ////////////////////// - // Candidate finder // - ////////////////////// - // (numVertLow, numVertHigh, numAttempts, bool independenceNumbe, bool chromaticNumber) - // computeCandidateGraphs(20, 80, 100000, true, true); + cout << "Enable independence-number heuristic? (y/n): "; + char indChoice; if (!(cin >> indChoice)) return 0; + cin.ignore(numeric_limits::max(), '\n'); + cout << "Enable chromatic-number search? (y/n): "; + char chrChoice; if (!(cin >> chrChoice)) return 0; + cin.ignore(numeric_limits::max(), '\n'); - //////////////////////// - // Blow-up of biwheel // - //////////////////////// - // int m = 5; - // n = m+2; // spokes: 5,6 - // edges = wheelGraphEdge(n, 2); - // printEdges(edges); - // cout << endl; - // edges = blowup(edges, n); - // printEdges(edges); + bool ind = (indChoice == 'y' || indChoice == 'Y'); + bool chr = (chrChoice == 'y' || chrChoice == 'Y'); + computeCandidateGraphs(low, high, attempts, ind, chr); return 0; } - diff --git a/data/candidates/chr9/101_63_graph.txt b/data/candidates/chr9/101_63_graph.txt new file mode 100644 index 0000000..74674ba --- /dev/null +++ b/data/candidates/chr9/101_63_graph.txt @@ -0,0 +1,591 @@ +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 82 +82 83 +83 84 +84 85 +85 86 +86 87 +87 88 +88 89 +89 90 +90 91 +91 92 +92 93 +93 94 +94 95 +95 96 +96 97 +97 98 +98 99 +99 100 +100 0 +46 98 +15 85 +14 26 +65 76 +12 89 +0 91 +17 53 +21 34 +54 56 +4 29 +68 89 +35 38 +48 94 +70 80 +69 74 +78 80 +25 27 +22 29 +82 85 +3 33 +67 90 +36 52 +16 21 +55 67 +68 84 +34 98 +17 61 +65 85 +38 47 +92 94 +2 90 +61 64 +8 13 +18 34 +0 90 +52 90 +17 59 +40 42 +55 59 +93 100 +68 86 +34 46 +3 90 +6 10 +60 66 +34 39 +4 13 +70 75 +69 80 +65 82 +4 31 +73 75 +93 97 +34 44 +76 81 +34 38 +14 23 +86 89 +34 99 +80 83 +14 16 +72 74 +15 87 +72 75 +4 6 +46 48 +67 74 +60 65 +7 10 +69 83 +22 25 +93 99 +65 67 +54 57 +69 71 +15 86 +39 43 +17 60 +49 91 +60 63 +34 100 +14 89 +41 44 +37 52 +3 6 +49 52 +60 67 +6 90 +35 37 +16 18 +38 40 +0 93 +29 33 +14 87 +38 49 +3 31 +25 29 +94 97 +16 85 +14 27 +3 100 +95 98 +79 81 +62 64 +14 24 +74 76 +14 25 +70 76 +6 8 +83 85 +34 43 +68 83 +49 90 +22 33 +17 58 +67 76 +54 58 +94 96 +52 55 +53 55 +40 46 +4 27 +46 94 +16 19 +38 52 +68 90 +81 83 +16 23 +64 85 +17 85 +22 34 +76 82 +38 46 +30 32 +11 89 +17 52 +78 81 +19 21 +77 80 +91 94 +10 12 +71 74 +97 99 +55 60 +25 28 +38 51 +76 78 +96 98 +70 77 +18 21 +4 8 +34 52 +10 89 +47 49 +0 2 +3 32 +3 34 +87 89 +44 46 +29 31 +6 89 +13 89 +71 75 +39 42 +18 52 +48 91 +55 58 +14 88 +55 57 +8 12 +41 43 +52 67 +41 46 +8 10 +1 90 +2 100 +22 24 +21 23 +34 36 +68 85 +68 74 +16 20 +30 33 +50 52 +53 58 +4 14 +91 93 +5 8 +41 45 +46 95 +49 51 +17 64 +4 28 +7 9 +60 64 +60 62 +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 82 +82 83 +83 84 +84 85 +85 86 +86 87 +87 88 +88 89 +89 90 +90 91 +91 92 +92 93 +93 94 +94 95 +95 96 +96 97 +97 98 +98 99 +99 100 +100 0 +28 83 +64 70 +45 89 +49 53 +0 11 +69 77 +16 88 +22 97 +17 26 +3 99 +36 75 +35 90 +9 21 +24 92 +5 11 +57 80 +62 73 +91 97 +12 91 +50 56 +68 79 +50 85 +31 82 +37 39 +3 8 +42 57 +27 84 +33 90 +41 90 +95 97 +64 71 +24 95 +3 11 +43 46 +46 88 +34 77 +65 79 +50 55 +41 61 +77 79 +11 19 +31 80 +70 73 +91 98 +31 91 +4 11 +38 75 +91 95 +67 69 +30 91 +9 98 +39 75 +65 68 +50 80 +58 63 +46 53 +20 22 +36 90 +32 80 +24 27 +91 100 +22 95 +42 60 +34 80 +46 57 +92 95 +35 77 +47 85 +1 11 +12 88 +12 90 +2 11 +34 78 +43 90 +20 25 +15 88 +43 89 +37 41 +19 25 +28 92 +56 80 +59 62 +57 59 +50 53 +27 88 +17 88 +40 74 +66 69 +24 26 +84 88 +63 73 +43 57 +5 10 +57 64 +31 81 +64 79 +98 100 +11 91 +40 75 +69 75 +53 57 +47 53 +63 71 +21 97 +42 61 +59 61 +30 82 +20 24 +11 14 +32 90 +13 88 +1 99 +50 82 +48 50 +11 16 +58 64 +30 92 +85 88 +11 100 +23 95 +40 73 +52 54 +19 26 +45 88 +29 82 +11 21 +3 5 +47 87 +46 87 +48 53 +24 94 +63 72 +50 84 +37 90 +0 99 +36 76 +9 97 +57 79 +8 98 +50 83 +42 59 +29 83 +22 96 +47 50 +3 98 +24 93 +12 14 +69 76 +37 75 +50 81 +65 69 +33 35 +9 11 +44 89 +3 7 +51 55 +69 79 +2 99 +66 68 +41 73 +11 18 +27 92 +36 77 +5 9 +53 56 +61 73 +70 74 +32 34 +28 30 +11 17 +51 54 +28 84 +6 9 +59 63 +32 91 +34 79 +17 19 +37 40 +17 27 +51 53 +43 45 +42 90 +71 73 +86 88 +88 90 +5 7 +85 87 +64 69 +11 15 +93 95 +13 15 +11 20 +20 23 diff --git a/data/candidates/chr9/101_63_partitions.txt b/data/candidates/chr9/101_63_partitions.txt new file mode 100644 index 0000000..3bfab8d --- /dev/null +++ b/data/candidates/chr9/101_63_partitions.txt @@ -0,0 +1,592 @@ +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 82 +82 83 +83 84 +84 85 +85 86 +86 87 +87 88 +88 89 +89 90 +90 91 +91 92 +92 93 +93 94 +94 95 +95 96 +96 97 +97 98 +98 99 +99 100 +100 0 +46 98 +15 85 +14 26 +65 76 +12 89 +0 91 +17 53 +21 34 +54 56 +4 29 +68 89 +35 38 +48 94 +70 80 +69 74 +78 80 +25 27 +22 29 +82 85 +3 33 +67 90 +36 52 +16 21 +55 67 +68 84 +34 98 +17 61 +65 85 +38 47 +92 94 +2 90 +61 64 +8 13 +18 34 +0 90 +52 90 +17 59 +40 42 +55 59 +93 100 +68 86 +34 46 +3 90 +6 10 +60 66 +34 39 +4 13 +70 75 +69 80 +65 82 +4 31 +73 75 +93 97 +34 44 +76 81 +34 38 +14 23 +86 89 +34 99 +80 83 +14 16 +72 74 +15 87 +72 75 +4 6 +46 48 +67 74 +60 65 +7 10 +69 83 +22 25 +93 99 +65 67 +54 57 +69 71 +15 86 +39 43 +17 60 +49 91 +60 63 +34 100 +14 89 +41 44 +37 52 +3 6 +49 52 +60 67 +6 90 +35 37 +16 18 +38 40 +0 93 +29 33 +14 87 +38 49 +3 31 +25 29 +94 97 +16 85 +14 27 +3 100 +95 98 +79 81 +62 64 +14 24 +74 76 +14 25 +70 76 +6 8 +83 85 +34 43 +68 83 +49 90 +22 33 +17 58 +67 76 +54 58 +94 96 +52 55 +53 55 +40 46 +4 27 +46 94 +16 19 +38 52 +68 90 +81 83 +16 23 +64 85 +17 85 +22 34 +76 82 +38 46 +30 32 +11 89 +17 52 +78 81 +19 21 +77 80 +91 94 +10 12 +71 74 +97 99 +55 60 +25 28 +38 51 +76 78 +96 98 +70 77 +18 21 +4 8 +34 52 +10 89 +47 49 +0 2 +3 32 +3 34 +87 89 +44 46 +29 31 +6 89 +13 89 +71 75 +39 42 +18 52 +48 91 +55 58 +14 88 +55 57 +8 12 +41 43 +52 67 +41 46 +8 10 +1 90 +2 100 +22 24 +21 23 +34 36 +68 85 +68 74 +16 20 +30 33 +50 52 +53 58 +4 14 +91 93 +5 8 +41 45 +46 95 +49 51 +17 64 +4 28 +7 9 +60 64 +60 62 + +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 82 +82 83 +83 84 +84 85 +85 86 +86 87 +87 88 +88 89 +89 90 +90 91 +91 92 +92 93 +93 94 +94 95 +95 96 +96 97 +97 98 +98 99 +99 100 +100 0 +28 83 +64 70 +45 89 +49 53 +0 11 +69 77 +16 88 +22 97 +17 26 +3 99 +36 75 +35 90 +9 21 +24 92 +5 11 +57 80 +62 73 +91 97 +12 91 +50 56 +68 79 +50 85 +31 82 +37 39 +3 8 +42 57 +27 84 +33 90 +41 90 +95 97 +64 71 +24 95 +3 11 +43 46 +46 88 +34 77 +65 79 +50 55 +41 61 +77 79 +11 19 +31 80 +70 73 +91 98 +31 91 +4 11 +38 75 +91 95 +67 69 +30 91 +9 98 +39 75 +65 68 +50 80 +58 63 +46 53 +20 22 +36 90 +32 80 +24 27 +91 100 +22 95 +42 60 +34 80 +46 57 +92 95 +35 77 +47 85 +1 11 +12 88 +12 90 +2 11 +34 78 +43 90 +20 25 +15 88 +43 89 +37 41 +19 25 +28 92 +56 80 +59 62 +57 59 +50 53 +27 88 +17 88 +40 74 +66 69 +24 26 +84 88 +63 73 +43 57 +5 10 +57 64 +31 81 +64 79 +98 100 +11 91 +40 75 +69 75 +53 57 +47 53 +63 71 +21 97 +42 61 +59 61 +30 82 +20 24 +11 14 +32 90 +13 88 +1 99 +50 82 +48 50 +11 16 +58 64 +30 92 +85 88 +11 100 +23 95 +40 73 +52 54 +19 26 +45 88 +29 82 +11 21 +3 5 +47 87 +46 87 +48 53 +24 94 +63 72 +50 84 +37 90 +0 99 +36 76 +9 97 +57 79 +8 98 +50 83 +42 59 +29 83 +22 96 +47 50 +3 98 +24 93 +12 14 +69 76 +37 75 +50 81 +65 69 +33 35 +9 11 +44 89 +3 7 +51 55 +69 79 +2 99 +66 68 +41 73 +11 18 +27 92 +36 77 +5 9 +53 56 +61 73 +70 74 +32 34 +28 30 +11 17 +51 54 +28 84 +6 9 +59 63 +32 91 +34 79 +17 19 +37 40 +17 27 +51 53 +43 45 +42 90 +71 73 +86 88 +88 90 +5 7 +85 87 +64 69 +11 15 +93 95 +13 15 +11 20 +20 23 diff --git a/data/candidates/chr9/103_179_graph.txt b/data/candidates/chr9/103_179_graph.txt new file mode 100644 index 0000000..10f94b9 --- /dev/null +++ b/data/candidates/chr9/103_179_graph.txt @@ -0,0 +1,603 @@ +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 82 +82 83 +83 84 +84 85 +85 86 +86 87 +87 88 +88 89 +89 90 +90 91 +91 92 +92 93 +93 94 +94 95 +95 96 +96 97 +97 98 +98 99 +99 100 +100 101 +101 102 +102 0 +87 97 +27 41 +42 84 +78 96 +21 87 +21 23 +1 42 +53 57 +53 64 +57 79 +79 90 +42 82 +45 52 +60 75 +22 28 +14 42 +61 71 +43 66 +83 87 +29 33 +44 50 +22 36 +25 86 +70 101 +80 88 +35 39 +88 91 +28 40 +50 80 +0 13 +22 33 +44 48 +58 76 +1 13 +13 21 +25 87 +7 10 +56 80 +48 52 +65 69 +96 98 +4 10 +18 41 +71 77 +0 5 +88 92 +16 21 +66 68 +20 41 +24 26 +52 80 +94 97 +78 95 +43 101 +7 11 +72 76 +78 91 +53 66 +6 12 +59 61 +26 28 +5 12 +87 99 +72 75 +84 87 +52 56 +20 39 +78 90 +15 17 +66 101 +50 81 +71 74 +42 81 +48 50 +100 102 +58 61 +22 29 +68 101 +87 100 +32 39 +78 101 +28 39 +2 5 +62 64 +9 11 +99 101 +27 40 +81 83 +62 65 +53 55 +53 63 +8 10 +88 94 +21 102 +71 75 +58 77 +2 13 +26 86 +52 54 +21 38 +53 58 +22 38 +22 34 +1 43 +42 86 +2 12 +78 92 +61 75 +17 21 +30 33 +13 102 +4 12 +45 53 +1 101 +35 38 +21 100 +78 93 +83 88 +85 87 +5 7 +61 69 +14 18 +49 51 +58 79 +81 88 +48 51 +96 99 +65 67 +23 25 +44 81 +23 26 +52 55 +58 62 +33 35 +28 30 +68 70 +72 74 +43 45 +18 42 +42 44 +57 80 +0 2 +43 53 +18 21 +58 78 +84 86 +15 18 +33 39 +22 37 +30 39 +31 39 +19 21 +7 12 +65 68 +26 42 +45 47 +3 12 +50 52 +44 47 +0 12 +34 36 +21 39 +73 75 +1 14 +60 76 +4 7 +21 25 +71 78 +55 57 +87 98 +64 66 +47 52 +13 15 +13 16 +30 32 +87 94 +7 9 +88 90 +92 94 +36 38 +79 88 +58 63 +62 69 +46 52 +42 83 +93 95 +26 41 +78 99 +18 20 +94 96 +70 78 +59 76 +39 41 +10 12 +71 76 +2 4 +1 102 +89 91 +23 28 +69 71 +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 82 +82 83 +83 84 +84 85 +85 86 +86 87 +87 88 +88 89 +89 90 +90 91 +91 92 +92 93 +93 94 +94 95 +95 96 +96 97 +97 98 +98 99 +99 100 +100 101 +101 102 +102 0 +53 102 +14 89 +66 80 +59 70 +25 29 +45 50 +15 55 +82 89 +84 91 +21 46 +83 85 +34 46 +15 33 +84 89 +78 102 +93 99 +7 95 +10 53 +80 92 +8 90 +10 16 +39 53 +17 51 +19 22 +15 39 +96 101 +90 92 +39 43 +42 45 +69 80 +37 44 +80 99 +63 89 +55 62 +64 89 +56 70 +17 27 +3 8 +70 73 +71 80 +19 46 +80 83 +61 66 +1 10 +81 89 +15 37 +71 73 +9 89 +83 86 +40 52 +53 70 +47 51 +10 17 +1 6 +79 101 +80 89 +53 56 +24 29 +41 43 +7 101 +15 28 +9 90 +36 45 +53 74 +73 76 +21 31 +47 49 +46 49 +72 77 +6 102 +90 94 +53 77 +31 46 +11 14 +3 9 +15 62 +32 46 +53 78 +7 102 +7 94 +15 32 +53 76 +15 30 +19 24 +85 89 +83 91 +1 5 +41 45 +11 16 +51 53 +61 70 +45 49 +22 31 +12 15 +67 80 +10 102 +38 43 +58 70 +18 51 +57 70 +56 59 +36 44 +6 8 +62 66 +16 27 +95 98 +56 62 +18 46 +8 94 +46 48 +15 36 +16 28 +29 31 +66 70 +36 46 +80 101 +0 6 +80 100 +18 27 +72 79 +67 70 +3 10 +83 92 +38 44 +15 53 +56 58 +17 53 +63 65 +68 80 +71 79 +23 31 +45 51 +20 22 +60 70 +82 87 +95 97 +56 61 +94 98 +56 60 +98 101 +11 89 +19 23 +18 47 +82 86 +7 96 +85 88 +41 51 +15 38 +72 78 +2 10 +10 89 +66 89 +98 100 +62 89 +11 13 +97 101 +94 99 +25 28 +65 89 +24 27 +92 99 +0 10 +33 36 +53 73 +80 82 +33 46 +15 29 +19 27 +84 90 +15 31 +3 6 +40 43 +20 46 +74 76 +53 75 +67 69 +63 66 +90 93 +54 56 +82 88 +24 31 +79 102 +14 62 +4 6 +1 3 +86 88 +3 5 +47 50 +40 51 +25 27 +39 52 +15 54 +70 80 +73 77 +12 14 +11 15 +35 46 diff --git a/data/candidates/chr9/103_179_partitions.txt b/data/candidates/chr9/103_179_partitions.txt new file mode 100644 index 0000000..84d4b57 --- /dev/null +++ b/data/candidates/chr9/103_179_partitions.txt @@ -0,0 +1,604 @@ +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 82 +82 83 +83 84 +84 85 +85 86 +86 87 +87 88 +88 89 +89 90 +90 91 +91 92 +92 93 +93 94 +94 95 +95 96 +96 97 +97 98 +98 99 +99 100 +100 101 +101 102 +102 0 +87 97 +27 41 +42 84 +78 96 +21 87 +21 23 +1 42 +53 57 +53 64 +57 79 +79 90 +42 82 +45 52 +60 75 +22 28 +14 42 +61 71 +43 66 +83 87 +29 33 +44 50 +22 36 +25 86 +70 101 +80 88 +35 39 +88 91 +28 40 +50 80 +0 13 +22 33 +44 48 +58 76 +1 13 +13 21 +25 87 +7 10 +56 80 +48 52 +65 69 +96 98 +4 10 +18 41 +71 77 +0 5 +88 92 +16 21 +66 68 +20 41 +24 26 +52 80 +94 97 +78 95 +43 101 +7 11 +72 76 +78 91 +53 66 +6 12 +59 61 +26 28 +5 12 +87 99 +72 75 +84 87 +52 56 +20 39 +78 90 +15 17 +66 101 +50 81 +71 74 +42 81 +48 50 +100 102 +58 61 +22 29 +68 101 +87 100 +32 39 +78 101 +28 39 +2 5 +62 64 +9 11 +99 101 +27 40 +81 83 +62 65 +53 55 +53 63 +8 10 +88 94 +21 102 +71 75 +58 77 +2 13 +26 86 +52 54 +21 38 +53 58 +22 38 +22 34 +1 43 +42 86 +2 12 +78 92 +61 75 +17 21 +30 33 +13 102 +4 12 +45 53 +1 101 +35 38 +21 100 +78 93 +83 88 +85 87 +5 7 +61 69 +14 18 +49 51 +58 79 +81 88 +48 51 +96 99 +65 67 +23 25 +44 81 +23 26 +52 55 +58 62 +33 35 +28 30 +68 70 +72 74 +43 45 +18 42 +42 44 +57 80 +0 2 +43 53 +18 21 +58 78 +84 86 +15 18 +33 39 +22 37 +30 39 +31 39 +19 21 +7 12 +65 68 +26 42 +45 47 +3 12 +50 52 +44 47 +0 12 +34 36 +21 39 +73 75 +1 14 +60 76 +4 7 +21 25 +71 78 +55 57 +87 98 +64 66 +47 52 +13 15 +13 16 +30 32 +87 94 +7 9 +88 90 +92 94 +36 38 +79 88 +58 63 +62 69 +46 52 +42 83 +93 95 +26 41 +78 99 +18 20 +94 96 +70 78 +59 76 +39 41 +10 12 +71 76 +2 4 +1 102 +89 91 +23 28 +69 71 + +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 82 +82 83 +83 84 +84 85 +85 86 +86 87 +87 88 +88 89 +89 90 +90 91 +91 92 +92 93 +93 94 +94 95 +95 96 +96 97 +97 98 +98 99 +99 100 +100 101 +101 102 +102 0 +53 102 +14 89 +66 80 +59 70 +25 29 +45 50 +15 55 +82 89 +84 91 +21 46 +83 85 +34 46 +15 33 +84 89 +78 102 +93 99 +7 95 +10 53 +80 92 +8 90 +10 16 +39 53 +17 51 +19 22 +15 39 +96 101 +90 92 +39 43 +42 45 +69 80 +37 44 +80 99 +63 89 +55 62 +64 89 +56 70 +17 27 +3 8 +70 73 +71 80 +19 46 +80 83 +61 66 +1 10 +81 89 +15 37 +71 73 +9 89 +83 86 +40 52 +53 70 +47 51 +10 17 +1 6 +79 101 +80 89 +53 56 +24 29 +41 43 +7 101 +15 28 +9 90 +36 45 +53 74 +73 76 +21 31 +47 49 +46 49 +72 77 +6 102 +90 94 +53 77 +31 46 +11 14 +3 9 +15 62 +32 46 +53 78 +7 102 +7 94 +15 32 +53 76 +15 30 +19 24 +85 89 +83 91 +1 5 +41 45 +11 16 +51 53 +61 70 +45 49 +22 31 +12 15 +67 80 +10 102 +38 43 +58 70 +18 51 +57 70 +56 59 +36 44 +6 8 +62 66 +16 27 +95 98 +56 62 +18 46 +8 94 +46 48 +15 36 +16 28 +29 31 +66 70 +36 46 +80 101 +0 6 +80 100 +18 27 +72 79 +67 70 +3 10 +83 92 +38 44 +15 53 +56 58 +17 53 +63 65 +68 80 +71 79 +23 31 +45 51 +20 22 +60 70 +82 87 +95 97 +56 61 +94 98 +56 60 +98 101 +11 89 +19 23 +18 47 +82 86 +7 96 +85 88 +41 51 +15 38 +72 78 +2 10 +10 89 +66 89 +98 100 +62 89 +11 13 +97 101 +94 99 +25 28 +65 89 +24 27 +92 99 +0 10 +33 36 +53 73 +80 82 +33 46 +15 29 +19 27 +84 90 +15 31 +3 6 +40 43 +20 46 +74 76 +53 75 +67 69 +63 66 +90 93 +54 56 +82 88 +24 31 +79 102 +14 62 +4 6 +1 3 +86 88 +3 5 +47 50 +40 51 +25 27 +39 52 +15 54 +70 80 +73 77 +12 14 +11 15 +35 46 diff --git a/data/candidates/chr9/108_217_graph.txt b/data/candidates/chr9/108_217_graph.txt new file mode 100644 index 0000000..43891af --- /dev/null +++ b/data/candidates/chr9/108_217_graph.txt @@ -0,0 +1,633 @@ +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 82 +82 83 +83 84 +84 85 +85 86 +86 87 +87 88 +88 89 +89 90 +90 91 +91 92 +92 93 +93 94 +94 95 +95 96 +96 97 +97 98 +98 99 +99 100 +100 101 +101 102 +102 103 +103 104 +104 105 +105 106 +106 107 +107 0 +16 94 +74 93 +1 64 +57 94 +6 100 +22 51 +25 29 +77 81 +9 34 +88 101 +9 28 +82 107 +23 39 +42 61 +1 73 +13 28 +17 20 +6 97 +42 51 +44 51 +96 98 +60 94 +100 105 +73 107 +6 94 +71 74 +45 51 +1 38 +62 94 +23 41 +23 33 +39 42 +50 57 +7 11 +78 85 +82 86 +13 15 +93 98 +13 23 +0 2 +52 94 +85 90 +1 70 +43 57 +75 77 +76 85 +3 37 +90 93 +82 88 +18 21 +102 106 +68 93 +88 107 +65 70 +46 50 +44 57 +89 101 +23 34 +15 21 +3 5 +31 34 +76 93 +65 68 +1 37 +76 90 +14 22 +6 34 +15 17 +42 64 +85 87 +61 94 +3 36 +6 98 +16 21 +45 57 +23 51 +94 97 +24 27 +47 50 +35 38 +83 86 +95 98 +9 29 +12 28 +46 57 +67 70 +100 103 +12 94 +48 50 +99 101 +25 28 +39 64 +63 94 +79 84 +101 106 +42 63 +2 106 +23 40 +66 68 +5 100 +51 53 +89 93 +50 55 +53 55 +85 88 +48 57 +74 77 +50 53 +5 34 +36 38 +26 28 +64 94 +93 99 +29 32 +78 80 +52 57 +79 83 +101 107 +81 107 +4 106 +7 94 +59 61 +50 56 +4 105 +43 51 +73 81 +42 57 +80 83 +2 37 +69 74 +6 9 +53 57 +86 88 +22 94 +29 34 +15 22 +39 41 +10 12 +38 64 +54 57 +58 61 +70 73 +16 22 +89 91 +12 16 +57 60 +76 78 +100 102 +51 94 +8 10 +72 74 +0 106 +103 106 +93 95 +0 73 +34 39 +45 50 +41 51 +3 35 +68 70 +3 34 +95 97 +57 61 +1 65 +47 49 +61 63 +78 81 +71 73 +12 15 +7 9 +98 100 +16 18 +64 68 +91 93 +74 81 +70 74 +8 11 +24 32 +103 105 +29 31 +89 92 +24 26 +13 22 +89 99 +34 38 +2 4 +17 21 +17 19 +30 32 +9 12 +75 93 +58 60 +83 85 +46 48 +85 89 +11 94 +79 85 +23 28 +19 21 +54 56 +23 27 +64 93 +32 34 +24 29 +24 33 +81 83 +69 93 +4 100 +65 67 +100 104 +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 82 +82 83 +83 84 +84 85 +85 86 +86 87 +87 88 +88 89 +89 90 +90 91 +91 92 +92 93 +93 94 +94 95 +95 96 +96 97 +97 98 +98 99 +99 100 +100 101 +101 102 +102 103 +103 104 +104 105 +105 106 +106 107 +107 0 +10 76 +63 69 +54 73 +67 103 +7 78 +23 47 +71 93 +30 73 +21 48 +12 67 +49 66 +78 95 +69 96 +7 76 +96 100 +95 105 +9 106 +38 51 +98 103 +83 94 +32 53 +31 40 +3 105 +56 61 +16 28 +40 44 +62 72 +77 83 +31 42 +96 99 +12 48 +1 7 +11 14 +96 103 +9 107 +35 51 +84 94 +73 84 +33 39 +30 43 +18 23 +53 56 +67 105 +92 94 +32 40 +13 20 +23 48 +15 19 +38 48 +14 20 +66 69 +15 29 +10 15 +69 102 +3 78 +38 47 +44 47 +53 63 +26 43 +40 45 +87 89 +9 11 +80 82 +1 106 +38 49 +33 37 +53 58 +33 40 +15 20 +8 76 +55 61 +69 71 +16 25 +63 71 +72 93 +72 92 +54 72 +76 84 +50 52 +75 84 +41 43 +86 91 +98 101 +97 103 +58 63 +25 43 +33 36 +72 86 +31 41 +90 92 +6 78 +38 50 +55 62 +32 54 +34 53 +4 7 +16 27 +73 76 +16 24 +11 106 +87 94 +48 66 +77 82 +31 73 +70 96 +97 99 +4 6 +67 102 +69 101 +28 30 +0 7 +59 63 +87 91 +11 105 +52 64 +81 94 +88 90 +7 77 +21 23 +15 76 +77 79 +50 66 +18 22 +62 71 +70 94 +54 62 +35 52 +60 63 +1 107 +7 107 +3 7 +77 84 +72 84 +15 28 +98 102 +40 46 +25 47 +12 66 +96 105 +82 94 +15 73 +3 6 +56 59 +50 65 +29 73 +56 60 +36 51 +52 63 +11 15 +43 47 +8 107 +27 43 +73 75 +17 24 +18 24 +1 3 +60 62 +13 21 +52 65 +33 35 +81 95 +44 46 +3 106 +31 43 +18 20 +13 48 +40 43 +20 22 +63 66 +84 87 +24 47 +79 82 +32 73 +79 81 +34 52 +67 104 +87 90 +12 105 +38 46 +11 13 +88 92 +3 95 +69 100 +88 94 +79 95 +70 93 +39 46 +16 19 +96 104 +33 38 +72 85 +37 51 +70 95 +74 76 +67 69 +56 58 +9 76 +64 66 +16 26 +86 92 +33 53 +5 7 +27 30 +84 86 +57 59 +68 102 +2 7 diff --git a/data/candidates/chr9/108_217_partitions.txt b/data/candidates/chr9/108_217_partitions.txt new file mode 100644 index 0000000..29d548c --- /dev/null +++ b/data/candidates/chr9/108_217_partitions.txt @@ -0,0 +1,634 @@ +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 82 +82 83 +83 84 +84 85 +85 86 +86 87 +87 88 +88 89 +89 90 +90 91 +91 92 +92 93 +93 94 +94 95 +95 96 +96 97 +97 98 +98 99 +99 100 +100 101 +101 102 +102 103 +103 104 +104 105 +105 106 +106 107 +107 0 +16 94 +74 93 +1 64 +57 94 +6 100 +22 51 +25 29 +77 81 +9 34 +88 101 +9 28 +82 107 +23 39 +42 61 +1 73 +13 28 +17 20 +6 97 +42 51 +44 51 +96 98 +60 94 +100 105 +73 107 +6 94 +71 74 +45 51 +1 38 +62 94 +23 41 +23 33 +39 42 +50 57 +7 11 +78 85 +82 86 +13 15 +93 98 +13 23 +0 2 +52 94 +85 90 +1 70 +43 57 +75 77 +76 85 +3 37 +90 93 +82 88 +18 21 +102 106 +68 93 +88 107 +65 70 +46 50 +44 57 +89 101 +23 34 +15 21 +3 5 +31 34 +76 93 +65 68 +1 37 +76 90 +14 22 +6 34 +15 17 +42 64 +85 87 +61 94 +3 36 +6 98 +16 21 +45 57 +23 51 +94 97 +24 27 +47 50 +35 38 +83 86 +95 98 +9 29 +12 28 +46 57 +67 70 +100 103 +12 94 +48 50 +99 101 +25 28 +39 64 +63 94 +79 84 +101 106 +42 63 +2 106 +23 40 +66 68 +5 100 +51 53 +89 93 +50 55 +53 55 +85 88 +48 57 +74 77 +50 53 +5 34 +36 38 +26 28 +64 94 +93 99 +29 32 +78 80 +52 57 +79 83 +101 107 +81 107 +4 106 +7 94 +59 61 +50 56 +4 105 +43 51 +73 81 +42 57 +80 83 +2 37 +69 74 +6 9 +53 57 +86 88 +22 94 +29 34 +15 22 +39 41 +10 12 +38 64 +54 57 +58 61 +70 73 +16 22 +89 91 +12 16 +57 60 +76 78 +100 102 +51 94 +8 10 +72 74 +0 106 +103 106 +93 95 +0 73 +34 39 +45 50 +41 51 +3 35 +68 70 +3 34 +95 97 +57 61 +1 65 +47 49 +61 63 +78 81 +71 73 +12 15 +7 9 +98 100 +16 18 +64 68 +91 93 +74 81 +70 74 +8 11 +24 32 +103 105 +29 31 +89 92 +24 26 +13 22 +89 99 +34 38 +2 4 +17 21 +17 19 +30 32 +9 12 +75 93 +58 60 +83 85 +46 48 +85 89 +11 94 +79 85 +23 28 +19 21 +54 56 +23 27 +64 93 +32 34 +24 29 +24 33 +81 83 +69 93 +4 100 +65 67 +100 104 + +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 82 +82 83 +83 84 +84 85 +85 86 +86 87 +87 88 +88 89 +89 90 +90 91 +91 92 +92 93 +93 94 +94 95 +95 96 +96 97 +97 98 +98 99 +99 100 +100 101 +101 102 +102 103 +103 104 +104 105 +105 106 +106 107 +107 0 +10 76 +63 69 +54 73 +67 103 +7 78 +23 47 +71 93 +30 73 +21 48 +12 67 +49 66 +78 95 +69 96 +7 76 +96 100 +95 105 +9 106 +38 51 +98 103 +83 94 +32 53 +31 40 +3 105 +56 61 +16 28 +40 44 +62 72 +77 83 +31 42 +96 99 +12 48 +1 7 +11 14 +96 103 +9 107 +35 51 +84 94 +73 84 +33 39 +30 43 +18 23 +53 56 +67 105 +92 94 +32 40 +13 20 +23 48 +15 19 +38 48 +14 20 +66 69 +15 29 +10 15 +69 102 +3 78 +38 47 +44 47 +53 63 +26 43 +40 45 +87 89 +9 11 +80 82 +1 106 +38 49 +33 37 +53 58 +33 40 +15 20 +8 76 +55 61 +69 71 +16 25 +63 71 +72 93 +72 92 +54 72 +76 84 +50 52 +75 84 +41 43 +86 91 +98 101 +97 103 +58 63 +25 43 +33 36 +72 86 +31 41 +90 92 +6 78 +38 50 +55 62 +32 54 +34 53 +4 7 +16 27 +73 76 +16 24 +11 106 +87 94 +48 66 +77 82 +31 73 +70 96 +97 99 +4 6 +67 102 +69 101 +28 30 +0 7 +59 63 +87 91 +11 105 +52 64 +81 94 +88 90 +7 77 +21 23 +15 76 +77 79 +50 66 +18 22 +62 71 +70 94 +54 62 +35 52 +60 63 +1 107 +7 107 +3 7 +77 84 +72 84 +15 28 +98 102 +40 46 +25 47 +12 66 +96 105 +82 94 +15 73 +3 6 +56 59 +50 65 +29 73 +56 60 +36 51 +52 63 +11 15 +43 47 +8 107 +27 43 +73 75 +17 24 +18 24 +1 3 +60 62 +13 21 +52 65 +33 35 +81 95 +44 46 +3 106 +31 43 +18 20 +13 48 +40 43 +20 22 +63 66 +84 87 +24 47 +79 82 +32 73 +79 81 +34 52 +67 104 +87 90 +12 105 +38 46 +11 13 +88 92 +3 95 +69 100 +88 94 +79 95 +70 93 +39 46 +16 19 +96 104 +33 38 +72 85 +37 51 +70 95 +74 76 +67 69 +56 58 +9 76 +64 66 +16 26 +86 92 +33 53 +5 7 +27 30 +84 86 +57 59 +68 102 +2 7 diff --git a/data/candidates/chr9/109_127_graph.txt b/data/candidates/chr9/109_127_graph.txt new file mode 100644 index 0000000..8e97c2e --- /dev/null +++ b/data/candidates/chr9/109_127_graph.txt @@ -0,0 +1,636 @@ +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 82 +82 83 +83 84 +84 85 +85 86 +86 87 +87 88 +88 89 +89 90 +90 91 +91 92 +92 93 +93 94 +94 95 +95 96 +96 97 +97 98 +98 99 +99 100 +100 101 +101 102 +102 103 +103 104 +104 105 +105 106 +106 107 +107 108 +108 0 +42 84 +80 97 +42 90 +53 65 +18 56 +39 98 +72 98 +14 18 +28 51 +49 81 +6 100 +12 106 +26 100 +10 16 +47 49 +67 76 +12 105 +103 105 +4 100 +34 42 +68 76 +23 56 +9 107 +14 60 +4 104 +69 74 +23 28 +12 71 +28 37 +37 41 +14 62 +29 48 +80 94 +88 91 +69 72 +28 38 +81 94 +31 35 +19 22 +77 98 +81 91 +12 68 +63 66 +12 103 +52 66 +55 59 +93 97 +66 78 +36 41 +60 64 +44 48 +45 83 +15 18 +72 103 +52 54 +72 100 +11 107 +29 34 +21 100 +50 81 +100 104 +19 21 +11 16 +62 67 +1 106 +51 55 +102 104 +61 63 +91 98 +27 38 +12 62 +0 3 +48 51 +31 36 +81 88 +7 108 +0 107 +77 80 +56 60 +61 64 +40 91 +16 18 +57 59 +69 71 +72 77 +10 21 +8 107 +84 88 +86 90 +83 88 +5 100 +12 67 +16 19 +29 36 +38 41 +0 5 +29 44 +38 40 +12 72 +16 21 +79 81 +54 64 +67 77 +92 97 +49 83 +74 77 +23 27 +77 97 +51 54 +14 61 +34 43 +11 14 +29 32 +53 66 +45 49 +18 60 +32 34 +62 66 +20 22 +1 105 +3 104 +42 44 +81 92 +25 100 +81 83 +26 98 +87 89 +23 55 +66 79 +42 86 +27 98 +72 99 +21 24 +67 78 +34 36 +68 75 +31 33 +44 46 +69 75 +29 37 +36 42 +8 108 +3 5 +94 96 +28 55 +15 17 +44 83 +80 95 +72 101 +81 93 +66 81 +91 97 +53 64 +28 48 +11 15 +50 52 +46 49 +12 14 +49 82 +21 23 +58 60 +6 8 +77 79 +56 59 +68 70 +88 90 +27 39 +19 23 +68 71 +95 97 +86 88 +25 27 +1 107 +23 25 +54 59 +34 44 +18 23 +72 74 +24 100 +13 62 +30 32 +40 90 +8 100 +50 66 +0 2 +49 51 +74 76 +9 21 +57 60 +26 99 +0 6 +30 36 +41 90 +9 100 +10 107 +73 77 +63 65 +0 7 +31 34 +54 60 +85 88 +84 86 +94 97 +40 98 +12 107 +2 105 +44 47 +72 102 +2 104 +87 90 +101 104 +44 84 +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 82 +82 83 +83 84 +84 85 +85 86 +86 87 +87 88 +88 89 +89 90 +90 91 +91 92 +92 93 +93 94 +94 95 +95 96 +96 97 +97 98 +98 99 +99 100 +100 101 +101 102 +102 103 +103 104 +104 105 +105 106 +106 107 +107 108 +108 0 +36 39 +5 13 +90 95 +7 42 +3 88 +24 77 +34 53 +7 46 +4 47 +32 76 +76 101 +81 95 +0 54 +27 35 +15 26 +38 48 +17 25 +17 82 +88 96 +34 76 +49 52 +47 52 +55 71 +60 102 +85 89 +19 77 +82 85 +67 70 +97 102 +102 108 +30 35 +57 102 +5 85 +59 66 +61 65 +65 101 +39 45 +60 101 +88 95 +3 97 +14 39 +70 72 +29 76 +12 41 +11 42 +28 77 +39 44 +42 45 +13 85 +34 51 +58 70 +83 89 +73 101 +10 13 +1 3 +4 7 +67 101 +96 100 +3 105 +13 40 +81 90 +10 12 +100 102 +36 49 +59 65 +84 89 +7 13 +15 36 +3 54 +78 100 +82 89 +18 79 +62 64 +36 48 +95 100 +47 54 +7 10 +21 77 +89 94 +19 25 +102 106 +30 33 +55 70 +59 62 +102 105 +37 39 +15 85 +106 108 +13 39 +93 95 +53 75 +24 26 +19 79 +27 29 +68 73 +82 84 +92 95 +61 101 +97 104 +98 102 +29 31 +55 74 +54 56 +27 36 +15 27 +51 53 +0 57 +20 25 +0 105 +89 92 +17 79 +54 57 +8 42 +36 38 +22 25 +78 95 +53 76 +12 40 +12 42 +40 42 +56 70 +68 72 +97 100 +92 94 +19 78 +34 49 +60 62 +53 74 +5 88 +98 100 +105 107 +78 81 +6 13 +59 64 +65 67 +16 25 +78 80 +10 42 +35 49 +2 54 +15 82 +38 47 +53 55 +56 58 +86 89 +17 19 +62 65 +71 73 +1 54 +43 45 +59 67 +24 27 +4 54 +33 35 +33 76 +40 43 +77 101 +16 82 +74 101 +97 103 +91 95 +9 42 +5 7 +59 70 +97 99 +28 76 +7 9 +67 69 +15 39 +39 43 +22 24 +79 82 +77 100 +39 47 +67 73 +88 94 +88 97 +7 45 +80 82 +97 105 +14 85 +57 108 +105 108 +58 102 +27 30 +4 88 +59 102 +39 46 +89 91 +24 28 +34 50 +81 89 +20 77 +22 77 +75 101 +15 25 +21 25 +47 53 +4 46 +5 86 +55 73 +31 76 +59 63 +5 87 +48 52 +23 77 diff --git a/data/candidates/chr9/109_127_partitions.txt b/data/candidates/chr9/109_127_partitions.txt new file mode 100644 index 0000000..888a126 --- /dev/null +++ b/data/candidates/chr9/109_127_partitions.txt @@ -0,0 +1,637 @@ +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 82 +82 83 +83 84 +84 85 +85 86 +86 87 +87 88 +88 89 +89 90 +90 91 +91 92 +92 93 +93 94 +94 95 +95 96 +96 97 +97 98 +98 99 +99 100 +100 101 +101 102 +102 103 +103 104 +104 105 +105 106 +106 107 +107 108 +108 0 +42 84 +80 97 +42 90 +53 65 +18 56 +39 98 +72 98 +14 18 +28 51 +49 81 +6 100 +12 106 +26 100 +10 16 +47 49 +67 76 +12 105 +103 105 +4 100 +34 42 +68 76 +23 56 +9 107 +14 60 +4 104 +69 74 +23 28 +12 71 +28 37 +37 41 +14 62 +29 48 +80 94 +88 91 +69 72 +28 38 +81 94 +31 35 +19 22 +77 98 +81 91 +12 68 +63 66 +12 103 +52 66 +55 59 +93 97 +66 78 +36 41 +60 64 +44 48 +45 83 +15 18 +72 103 +52 54 +72 100 +11 107 +29 34 +21 100 +50 81 +100 104 +19 21 +11 16 +62 67 +1 106 +51 55 +102 104 +61 63 +91 98 +27 38 +12 62 +0 3 +48 51 +31 36 +81 88 +7 108 +0 107 +77 80 +56 60 +61 64 +40 91 +16 18 +57 59 +69 71 +72 77 +10 21 +8 107 +84 88 +86 90 +83 88 +5 100 +12 67 +16 19 +29 36 +38 41 +0 5 +29 44 +38 40 +12 72 +16 21 +79 81 +54 64 +67 77 +92 97 +49 83 +74 77 +23 27 +77 97 +51 54 +14 61 +34 43 +11 14 +29 32 +53 66 +45 49 +18 60 +32 34 +62 66 +20 22 +1 105 +3 104 +42 44 +81 92 +25 100 +81 83 +26 98 +87 89 +23 55 +66 79 +42 86 +27 98 +72 99 +21 24 +67 78 +34 36 +68 75 +31 33 +44 46 +69 75 +29 37 +36 42 +8 108 +3 5 +94 96 +28 55 +15 17 +44 83 +80 95 +72 101 +81 93 +66 81 +91 97 +53 64 +28 48 +11 15 +50 52 +46 49 +12 14 +49 82 +21 23 +58 60 +6 8 +77 79 +56 59 +68 70 +88 90 +27 39 +19 23 +68 71 +95 97 +86 88 +25 27 +1 107 +23 25 +54 59 +34 44 +18 23 +72 74 +24 100 +13 62 +30 32 +40 90 +8 100 +50 66 +0 2 +49 51 +74 76 +9 21 +57 60 +26 99 +0 6 +30 36 +41 90 +9 100 +10 107 +73 77 +63 65 +0 7 +31 34 +54 60 +85 88 +84 86 +94 97 +40 98 +12 107 +2 105 +44 47 +72 102 +2 104 +87 90 +101 104 +44 84 + +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 82 +82 83 +83 84 +84 85 +85 86 +86 87 +87 88 +88 89 +89 90 +90 91 +91 92 +92 93 +93 94 +94 95 +95 96 +96 97 +97 98 +98 99 +99 100 +100 101 +101 102 +102 103 +103 104 +104 105 +105 106 +106 107 +107 108 +108 0 +36 39 +5 13 +90 95 +7 42 +3 88 +24 77 +34 53 +7 46 +4 47 +32 76 +76 101 +81 95 +0 54 +27 35 +15 26 +38 48 +17 25 +17 82 +88 96 +34 76 +49 52 +47 52 +55 71 +60 102 +85 89 +19 77 +82 85 +67 70 +97 102 +102 108 +30 35 +57 102 +5 85 +59 66 +61 65 +65 101 +39 45 +60 101 +88 95 +3 97 +14 39 +70 72 +29 76 +12 41 +11 42 +28 77 +39 44 +42 45 +13 85 +34 51 +58 70 +83 89 +73 101 +10 13 +1 3 +4 7 +67 101 +96 100 +3 105 +13 40 +81 90 +10 12 +100 102 +36 49 +59 65 +84 89 +7 13 +15 36 +3 54 +78 100 +82 89 +18 79 +62 64 +36 48 +95 100 +47 54 +7 10 +21 77 +89 94 +19 25 +102 106 +30 33 +55 70 +59 62 +102 105 +37 39 +15 85 +106 108 +13 39 +93 95 +53 75 +24 26 +19 79 +27 29 +68 73 +82 84 +92 95 +61 101 +97 104 +98 102 +29 31 +55 74 +54 56 +27 36 +15 27 +51 53 +0 57 +20 25 +0 105 +89 92 +17 79 +54 57 +8 42 +36 38 +22 25 +78 95 +53 76 +12 40 +12 42 +40 42 +56 70 +68 72 +97 100 +92 94 +19 78 +34 49 +60 62 +53 74 +5 88 +98 100 +105 107 +78 81 +6 13 +59 64 +65 67 +16 25 +78 80 +10 42 +35 49 +2 54 +15 82 +38 47 +53 55 +56 58 +86 89 +17 19 +62 65 +71 73 +1 54 +43 45 +59 67 +24 27 +4 54 +33 35 +33 76 +40 43 +77 101 +16 82 +74 101 +97 103 +91 95 +9 42 +5 7 +59 70 +97 99 +28 76 +7 9 +67 69 +15 39 +39 43 +22 24 +79 82 +77 100 +39 47 +67 73 +88 94 +88 97 +7 45 +80 82 +97 105 +14 85 +57 108 +105 108 +58 102 +27 30 +4 88 +59 102 +39 46 +89 91 +24 28 +34 50 +81 89 +20 77 +22 77 +75 101 +15 25 +21 25 +47 53 +4 46 +5 86 +55 73 +31 76 +59 63 +5 87 +48 52 +23 77 diff --git a/data/candidates/chr9/109_159_graph.txt b/data/candidates/chr9/109_159_graph.txt new file mode 100644 index 0000000..e2215c3 --- /dev/null +++ b/data/candidates/chr9/109_159_graph.txt @@ -0,0 +1,637 @@ +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 82 +82 83 +83 84 +84 85 +85 86 +86 87 +87 88 +88 89 +89 90 +90 91 +91 92 +92 93 +93 94 +94 95 +95 96 +96 97 +97 98 +98 99 +99 100 +100 101 +101 102 +102 103 +103 104 +104 105 +105 106 +106 107 +107 108 +108 0 +65 93 +68 97 +17 23 +16 52 +13 105 +57 96 +55 60 +16 50 +46 57 +44 96 +61 95 +48 57 +66 89 +12 29 +80 83 +42 98 +12 21 +12 25 +29 98 +24 36 +13 103 +34 37 +30 37 +102 106 +38 40 +46 96 +105 107 +102 105 +24 30 +76 80 +71 91 +98 108 +62 99 +83 90 +8 107 +38 45 +66 74 +13 61 +9 108 +72 78 +17 19 +42 96 +22 24 +61 63 +16 20 +38 44 +16 55 +67 74 +10 13 +36 45 +68 92 +81 89 +17 46 +51 55 +50 52 +45 96 +40 42 +80 82 +24 34 +13 104 +26 28 +46 49 +4 108 +75 89 +82 89 +49 57 +39 41 +18 22 +29 37 +12 108 +66 97 +40 43 +37 41 +2 4 +80 91 +62 102 +99 106 +22 25 +92 94 +17 36 +69 92 +37 45 +57 60 +65 92 +77 79 +46 50 +62 64 +84 88 +15 20 +69 91 +74 78 +85 90 +71 79 +96 98 +10 107 +56 60 +95 97 +82 88 +5 108 +4 107 +13 15 +29 41 +6 107 +4 6 +68 70 +63 93 +12 26 +24 35 +13 55 +84 87 +1 4 +97 99 +27 30 +18 20 +12 20 +87 89 +13 62 +8 10 +99 102 +30 33 +6 8 +5 8 +24 33 +17 45 +93 95 +41 98 +66 92 +72 79 +9 12 +100 106 +74 76 +66 91 +18 23 +98 107 +47 57 +12 15 +2 5 +31 37 +83 88 +75 81 +67 72 +29 108 +100 102 +61 96 +5 7 +49 55 +38 41 +49 51 +70 72 +92 97 +12 14 +52 55 +76 81 +99 101 +102 104 +98 106 +32 37 +9 11 +94 97 +20 22 +66 99 +66 75 +17 50 +64 93 +76 79 +66 90 +24 27 +67 73 +65 99 +84 90 +8 108 +28 30 +59 96 +40 44 +64 99 +66 68 +1 5 +13 60 +21 25 +25 27 +86 90 +51 53 +12 28 +62 103 +70 91 +16 19 +83 91 +11 13 +76 78 +67 70 +63 95 +58 60 +57 59 +49 56 +84 86 +31 33 +32 34 +71 80 +0 4 +60 96 +35 37 +52 54 +15 55 +72 74 +53 55 +43 96 +86 89 +47 49 +13 107 +23 36 +1 3 +0 5 +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 82 +82 83 +83 84 +84 85 +85 86 +86 87 +87 88 +88 89 +89 90 +90 91 +91 92 +92 93 +93 94 +94 95 +95 96 +96 97 +97 98 +98 99 +99 100 +100 101 +101 102 +102 103 +103 104 +104 105 +105 106 +106 107 +107 108 +108 0 +16 102 +22 53 +5 11 +73 77 +9 14 +2 66 +71 89 +6 61 +82 92 +25 55 +2 82 +23 96 +7 58 +25 71 +1 93 +93 105 +22 47 +34 44 +36 39 +24 47 +53 57 +56 71 +9 15 +28 43 +17 53 +31 34 +68 80 +93 100 +12 102 +93 108 +80 88 +30 34 +8 15 +66 81 +32 50 +83 86 +28 42 +43 46 +60 65 +5 62 +29 34 +24 46 +35 38 +89 92 +28 38 +71 73 +4 102 +29 52 +19 23 +46 48 +6 10 +1 82 +6 60 +92 96 +25 54 +70 77 +2 62 +16 98 +88 91 +19 97 +72 77 +35 41 +59 67 +2 108 +4 12 +33 49 +71 88 +81 87 +4 105 +19 21 +73 76 +29 53 +34 41 +82 85 +53 58 +72 88 +21 53 +93 104 +43 45 +3 107 +22 51 +34 42 +70 76 +60 67 +21 23 +71 75 +38 42 +83 92 +34 45 +56 59 +29 31 +54 56 +22 50 +25 29 +25 46 +93 102 +93 96 +5 61 +23 71 +71 76 +67 81 +56 67 +1 108 +16 99 +2 64 +82 86 +2 81 +25 28 +33 45 +90 92 +87 91 +5 10 +70 79 +69 79 +23 97 +3 105 +15 53 +16 101 +42 44 +25 53 +82 84 +94 96 +60 63 +98 100 +17 20 +82 93 +86 91 +80 87 +16 100 +68 81 +93 107 +71 92 +78 88 +45 49 +22 52 +4 62 +7 60 +19 98 +28 34 +24 71 +81 86 +26 46 +55 71 +23 47 +12 16 +35 39 +35 40 +47 50 +3 62 +27 43 +54 57 +4 103 +56 68 +97 100 +64 66 +32 49 +2 107 +56 70 +16 18 +45 48 +79 88 +15 58 +93 101 +32 51 +93 103 +7 59 +69 80 +86 92 +39 42 +94 100 +65 67 +5 12 +17 21 +83 85 +10 12 +70 78 +31 51 +26 43 +37 39 +16 53 +2 63 +7 9 +7 15 +9 13 +73 75 +6 9 +0 2 +103 105 +23 92 +63 65 +36 38 +77 88 +28 35 +96 100 +29 51 +95 100 +88 90 +56 58 +14 16 +60 62 +71 74 +48 50 +13 16 +93 106 +56 69 +18 98 +3 106 diff --git a/data/candidates/chr9/109_159_partitions.txt b/data/candidates/chr9/109_159_partitions.txt new file mode 100644 index 0000000..b34e0d3 --- /dev/null +++ b/data/candidates/chr9/109_159_partitions.txt @@ -0,0 +1,638 @@ +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 82 +82 83 +83 84 +84 85 +85 86 +86 87 +87 88 +88 89 +89 90 +90 91 +91 92 +92 93 +93 94 +94 95 +95 96 +96 97 +97 98 +98 99 +99 100 +100 101 +101 102 +102 103 +103 104 +104 105 +105 106 +106 107 +107 108 +108 0 +65 93 +68 97 +17 23 +16 52 +13 105 +57 96 +55 60 +16 50 +46 57 +44 96 +61 95 +48 57 +66 89 +12 29 +80 83 +42 98 +12 21 +12 25 +29 98 +24 36 +13 103 +34 37 +30 37 +102 106 +38 40 +46 96 +105 107 +102 105 +24 30 +76 80 +71 91 +98 108 +62 99 +83 90 +8 107 +38 45 +66 74 +13 61 +9 108 +72 78 +17 19 +42 96 +22 24 +61 63 +16 20 +38 44 +16 55 +67 74 +10 13 +36 45 +68 92 +81 89 +17 46 +51 55 +50 52 +45 96 +40 42 +80 82 +24 34 +13 104 +26 28 +46 49 +4 108 +75 89 +82 89 +49 57 +39 41 +18 22 +29 37 +12 108 +66 97 +40 43 +37 41 +2 4 +80 91 +62 102 +99 106 +22 25 +92 94 +17 36 +69 92 +37 45 +57 60 +65 92 +77 79 +46 50 +62 64 +84 88 +15 20 +69 91 +74 78 +85 90 +71 79 +96 98 +10 107 +56 60 +95 97 +82 88 +5 108 +4 107 +13 15 +29 41 +6 107 +4 6 +68 70 +63 93 +12 26 +24 35 +13 55 +84 87 +1 4 +97 99 +27 30 +18 20 +12 20 +87 89 +13 62 +8 10 +99 102 +30 33 +6 8 +5 8 +24 33 +17 45 +93 95 +41 98 +66 92 +72 79 +9 12 +100 106 +74 76 +66 91 +18 23 +98 107 +47 57 +12 15 +2 5 +31 37 +83 88 +75 81 +67 72 +29 108 +100 102 +61 96 +5 7 +49 55 +38 41 +49 51 +70 72 +92 97 +12 14 +52 55 +76 81 +99 101 +102 104 +98 106 +32 37 +9 11 +94 97 +20 22 +66 99 +66 75 +17 50 +64 93 +76 79 +66 90 +24 27 +67 73 +65 99 +84 90 +8 108 +28 30 +59 96 +40 44 +64 99 +66 68 +1 5 +13 60 +21 25 +25 27 +86 90 +51 53 +12 28 +62 103 +70 91 +16 19 +83 91 +11 13 +76 78 +67 70 +63 95 +58 60 +57 59 +49 56 +84 86 +31 33 +32 34 +71 80 +0 4 +60 96 +35 37 +52 54 +15 55 +72 74 +53 55 +43 96 +86 89 +47 49 +13 107 +23 36 +1 3 +0 5 + +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 82 +82 83 +83 84 +84 85 +85 86 +86 87 +87 88 +88 89 +89 90 +90 91 +91 92 +92 93 +93 94 +94 95 +95 96 +96 97 +97 98 +98 99 +99 100 +100 101 +101 102 +102 103 +103 104 +104 105 +105 106 +106 107 +107 108 +108 0 +16 102 +22 53 +5 11 +73 77 +9 14 +2 66 +71 89 +6 61 +82 92 +25 55 +2 82 +23 96 +7 58 +25 71 +1 93 +93 105 +22 47 +34 44 +36 39 +24 47 +53 57 +56 71 +9 15 +28 43 +17 53 +31 34 +68 80 +93 100 +12 102 +93 108 +80 88 +30 34 +8 15 +66 81 +32 50 +83 86 +28 42 +43 46 +60 65 +5 62 +29 34 +24 46 +35 38 +89 92 +28 38 +71 73 +4 102 +29 52 +19 23 +46 48 +6 10 +1 82 +6 60 +92 96 +25 54 +70 77 +2 62 +16 98 +88 91 +19 97 +72 77 +35 41 +59 67 +2 108 +4 12 +33 49 +71 88 +81 87 +4 105 +19 21 +73 76 +29 53 +34 41 +82 85 +53 58 +72 88 +21 53 +93 104 +43 45 +3 107 +22 51 +34 42 +70 76 +60 67 +21 23 +71 75 +38 42 +83 92 +34 45 +56 59 +29 31 +54 56 +22 50 +25 29 +25 46 +93 102 +93 96 +5 61 +23 71 +71 76 +67 81 +56 67 +1 108 +16 99 +2 64 +82 86 +2 81 +25 28 +33 45 +90 92 +87 91 +5 10 +70 79 +69 79 +23 97 +3 105 +15 53 +16 101 +42 44 +25 53 +82 84 +94 96 +60 63 +98 100 +17 20 +82 93 +86 91 +80 87 +16 100 +68 81 +93 107 +71 92 +78 88 +45 49 +22 52 +4 62 +7 60 +19 98 +28 34 +24 71 +81 86 +26 46 +55 71 +23 47 +12 16 +35 39 +35 40 +47 50 +3 62 +27 43 +54 57 +4 103 +56 68 +97 100 +64 66 +32 49 +2 107 +56 70 +16 18 +45 48 +79 88 +15 58 +93 101 +32 51 +93 103 +7 59 +69 80 +86 92 +39 42 +94 100 +65 67 +5 12 +17 21 +83 85 +10 12 +70 78 +31 51 +26 43 +37 39 +16 53 +2 63 +7 9 +7 15 +9 13 +73 75 +6 9 +0 2 +103 105 +23 92 +63 65 +36 38 +77 88 +28 35 +96 100 +29 51 +95 100 +88 90 +56 58 +14 16 +60 62 +71 74 +48 50 +13 16 +93 106 +56 69 +18 98 +3 106 diff --git a/data/candidates/chr9/109_33_graph.txt b/data/candidates/chr9/109_33_graph.txt new file mode 100644 index 0000000..ccccedb --- /dev/null +++ b/data/candidates/chr9/109_33_graph.txt @@ -0,0 +1,639 @@ +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 82 +82 83 +83 84 +84 85 +85 86 +86 87 +87 88 +88 89 +89 90 +90 91 +91 92 +92 93 +93 94 +94 95 +95 96 +96 97 +97 98 +98 99 +99 100 +100 101 +101 102 +102 103 +103 104 +104 105 +105 106 +106 107 +107 108 +108 0 +11 36 +57 73 +18 83 +30 33 +3 79 +35 68 +8 83 +28 31 +20 25 +44 73 +82 94 +24 34 +19 83 +51 66 +34 73 +55 63 +35 73 +88 98 +97 107 +1 7 +40 76 +10 14 +29 78 +46 55 +85 88 +85 107 +23 35 +80 96 +101 106 +16 35 +13 36 +50 53 +57 59 +61 72 +48 67 +5 79 +6 40 +35 40 +6 39 +59 72 +7 9 +68 70 +87 105 +90 93 +64 69 +35 44 +100 106 +30 76 +19 27 +82 95 +98 101 +3 107 +49 53 +21 25 +60 72 +32 34 +88 105 +3 6 +0 85 +98 102 +13 35 +20 35 +45 47 +42 74 +94 97 +69 72 +2 7 +90 97 +1 108 +30 77 +12 14 +82 85 +19 81 +94 96 +53 63 +24 35 +44 56 +17 35 +1 85 +1 83 +81 83 +17 19 +44 55 +56 63 +48 55 +101 104 +51 53 +52 64 +21 24 +46 48 +33 76 +76 79 +17 83 +85 94 +98 100 +68 73 +49 66 +51 64 +6 10 +6 38 +56 62 +86 106 +96 107 +56 73 +49 51 +6 79 +33 75 +21 35 +27 34 +15 17 +61 63 +6 36 +88 92 +45 68 +10 15 +91 93 +40 44 +73 75 +9 17 +70 73 +79 81 +58 73 +98 106 +36 40 +104 106 +49 54 +6 9 +27 81 +2 108 +61 64 +36 39 +44 74 +14 16 +80 107 +7 83 +52 63 +28 79 +31 34 +102 105 +21 23 +90 98 +36 38 +9 83 +85 108 +45 48 +69 71 +64 72 +88 102 +56 61 +34 75 +41 74 +37 39 +59 61 +89 98 +26 34 +17 20 +85 106 +92 94 +20 26 +101 103 +3 108 +83 85 +49 55 +81 95 +27 79 +51 65 +93 97 +88 90 +90 92 +13 16 +98 107 +22 24 +99 101 +88 94 +87 106 +40 42 +24 26 +64 68 +44 46 +43 74 +1 84 +28 30 +77 79 +66 68 +6 76 +30 32 +54 63 +27 31 +40 75 +85 87 +71 73 +9 15 +3 5 +48 66 +10 36 +40 74 +103 105 +58 72 +30 78 +10 12 +20 27 +79 107 +56 59 +2 6 +64 66 +40 43 +35 45 +29 79 +80 95 +48 68 +4 6 +11 13 +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 82 +82 83 +83 84 +84 85 +85 86 +86 87 +87 88 +88 89 +89 90 +90 91 +91 92 +92 93 +93 94 +94 95 +95 96 +96 97 +97 98 +98 99 +99 100 +100 101 +101 102 +102 103 +103 104 +104 105 +105 106 +106 107 +107 108 +108 0 +44 105 +9 63 +2 11 +66 108 +48 75 +6 66 +77 103 +0 43 +73 108 +41 60 +85 89 +90 108 +2 40 +27 32 +67 70 +53 73 +85 100 +100 105 +16 25 +30 40 +49 57 +74 82 +94 100 +39 41 +58 66 +96 99 +16 26 +1 43 +5 66 +86 96 +48 104 +3 8 +43 108 +22 35 +82 108 +16 62 +50 52 +4 66 +50 73 +20 62 +13 40 +66 69 +100 108 +0 66 +37 40 +91 94 +13 26 +7 66 +73 82 +42 48 +41 57 +29 32 +83 101 +100 107 +42 57 +9 66 +58 60 +12 63 +42 49 +20 22 +75 78 +23 32 +50 75 +67 71 +52 73 +100 102 +93 100 +70 108 +8 66 +16 21 +35 39 +86 98 +2 41 +8 11 +95 100 +33 36 +55 72 +57 71 +48 77 +5 7 +105 108 +72 108 +87 90 +59 63 +46 105 +74 81 +41 61 +51 54 +35 61 +15 63 +9 65 +96 98 +78 102 +79 102 +29 40 +44 47 +13 15 +85 99 +5 8 +23 26 +82 89 +59 65 +20 61 +31 40 +85 101 +102 104 +83 102 +41 58 +16 24 +67 69 +14 63 +87 96 +33 37 +60 62 +33 40 +49 56 +13 28 +75 80 +39 61 +71 108 +57 67 +43 48 +1 4 +4 8 +84 89 +50 56 +54 73 +10 63 +2 12 +44 48 +23 25 +35 38 +106 108 +57 66 +80 83 +59 64 +69 108 +75 79 +16 22 +16 23 +15 62 +50 54 +43 105 +9 11 +35 37 +26 32 +92 108 +29 31 +87 95 +74 80 +86 97 +34 36 +90 94 +77 104 +38 40 +93 108 +28 40 +56 71 +90 95 +89 108 +2 4 +48 105 +54 72 +48 76 +105 107 +50 55 +22 32 +12 40 +27 29 +17 62 +80 82 +59 62 +13 63 +22 61 +84 101 +77 102 +1 41 +11 63 +41 43 +32 40 +86 99 +100 104 +18 21 +22 34 +96 100 +76 78 +47 105 +55 71 +17 21 +91 108 +83 89 +49 75 +13 27 +58 65 +1 66 +19 21 +9 64 +79 83 +22 33 +19 62 +87 89 +86 89 +3 11 +45 105 +50 74 +52 54 +15 26 +18 62 +86 88 diff --git a/data/candidates/chr9/109_33_partitions.txt b/data/candidates/chr9/109_33_partitions.txt new file mode 100644 index 0000000..136edc1 --- /dev/null +++ b/data/candidates/chr9/109_33_partitions.txt @@ -0,0 +1,640 @@ +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 82 +82 83 +83 84 +84 85 +85 86 +86 87 +87 88 +88 89 +89 90 +90 91 +91 92 +92 93 +93 94 +94 95 +95 96 +96 97 +97 98 +98 99 +99 100 +100 101 +101 102 +102 103 +103 104 +104 105 +105 106 +106 107 +107 108 +108 0 +11 36 +57 73 +18 83 +30 33 +3 79 +35 68 +8 83 +28 31 +20 25 +44 73 +82 94 +24 34 +19 83 +51 66 +34 73 +55 63 +35 73 +88 98 +97 107 +1 7 +40 76 +10 14 +29 78 +46 55 +85 88 +85 107 +23 35 +80 96 +101 106 +16 35 +13 36 +50 53 +57 59 +61 72 +48 67 +5 79 +6 40 +35 40 +6 39 +59 72 +7 9 +68 70 +87 105 +90 93 +64 69 +35 44 +100 106 +30 76 +19 27 +82 95 +98 101 +3 107 +49 53 +21 25 +60 72 +32 34 +88 105 +3 6 +0 85 +98 102 +13 35 +20 35 +45 47 +42 74 +94 97 +69 72 +2 7 +90 97 +1 108 +30 77 +12 14 +82 85 +19 81 +94 96 +53 63 +24 35 +44 56 +17 35 +1 85 +1 83 +81 83 +17 19 +44 55 +56 63 +48 55 +101 104 +51 53 +52 64 +21 24 +46 48 +33 76 +76 79 +17 83 +85 94 +98 100 +68 73 +49 66 +51 64 +6 10 +6 38 +56 62 +86 106 +96 107 +56 73 +49 51 +6 79 +33 75 +21 35 +27 34 +15 17 +61 63 +6 36 +88 92 +45 68 +10 15 +91 93 +40 44 +73 75 +9 17 +70 73 +79 81 +58 73 +98 106 +36 40 +104 106 +49 54 +6 9 +27 81 +2 108 +61 64 +36 39 +44 74 +14 16 +80 107 +7 83 +52 63 +28 79 +31 34 +102 105 +21 23 +90 98 +36 38 +9 83 +85 108 +45 48 +69 71 +64 72 +88 102 +56 61 +34 75 +41 74 +37 39 +59 61 +89 98 +26 34 +17 20 +85 106 +92 94 +20 26 +101 103 +3 108 +83 85 +49 55 +81 95 +27 79 +51 65 +93 97 +88 90 +90 92 +13 16 +98 107 +22 24 +99 101 +88 94 +87 106 +40 42 +24 26 +64 68 +44 46 +43 74 +1 84 +28 30 +77 79 +66 68 +6 76 +30 32 +54 63 +27 31 +40 75 +85 87 +71 73 +9 15 +3 5 +48 66 +10 36 +40 74 +103 105 +58 72 +30 78 +10 12 +20 27 +79 107 +56 59 +2 6 +64 66 +40 43 +35 45 +29 79 +80 95 +48 68 +4 6 +11 13 + +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 82 +82 83 +83 84 +84 85 +85 86 +86 87 +87 88 +88 89 +89 90 +90 91 +91 92 +92 93 +93 94 +94 95 +95 96 +96 97 +97 98 +98 99 +99 100 +100 101 +101 102 +102 103 +103 104 +104 105 +105 106 +106 107 +107 108 +108 0 +44 105 +9 63 +2 11 +66 108 +48 75 +6 66 +77 103 +0 43 +73 108 +41 60 +85 89 +90 108 +2 40 +27 32 +67 70 +53 73 +85 100 +100 105 +16 25 +30 40 +49 57 +74 82 +94 100 +39 41 +58 66 +96 99 +16 26 +1 43 +5 66 +86 96 +48 104 +3 8 +43 108 +22 35 +82 108 +16 62 +50 52 +4 66 +50 73 +20 62 +13 40 +66 69 +100 108 +0 66 +37 40 +91 94 +13 26 +7 66 +73 82 +42 48 +41 57 +29 32 +83 101 +100 107 +42 57 +9 66 +58 60 +12 63 +42 49 +20 22 +75 78 +23 32 +50 75 +67 71 +52 73 +100 102 +93 100 +70 108 +8 66 +16 21 +35 39 +86 98 +2 41 +8 11 +95 100 +33 36 +55 72 +57 71 +48 77 +5 7 +105 108 +72 108 +87 90 +59 63 +46 105 +74 81 +41 61 +51 54 +35 61 +15 63 +9 65 +96 98 +78 102 +79 102 +29 40 +44 47 +13 15 +85 99 +5 8 +23 26 +82 89 +59 65 +20 61 +31 40 +85 101 +102 104 +83 102 +41 58 +16 24 +67 69 +14 63 +87 96 +33 37 +60 62 +33 40 +49 56 +13 28 +75 80 +39 61 +71 108 +57 67 +43 48 +1 4 +4 8 +84 89 +50 56 +54 73 +10 63 +2 12 +44 48 +23 25 +35 38 +106 108 +57 66 +80 83 +59 64 +69 108 +75 79 +16 22 +16 23 +15 62 +50 54 +43 105 +9 11 +35 37 +26 32 +92 108 +29 31 +87 95 +74 80 +86 97 +34 36 +90 94 +77 104 +38 40 +93 108 +28 40 +56 71 +90 95 +89 108 +2 4 +48 105 +54 72 +48 76 +105 107 +50 55 +22 32 +12 40 +27 29 +17 62 +80 82 +59 62 +13 63 +22 61 +84 101 +77 102 +1 41 +11 63 +41 43 +32 40 +86 99 +100 104 +18 21 +22 34 +96 100 +76 78 +47 105 +55 71 +17 21 +91 108 +83 89 +49 75 +13 27 +58 65 +1 66 +19 21 +9 64 +79 83 +22 33 +19 62 +87 89 +86 89 +3 11 +45 105 +50 74 +52 54 +15 26 +18 62 +86 88 diff --git a/data/candidates/chr9/111_256_graph.txt b/data/candidates/chr9/111_256_graph.txt new file mode 100644 index 0000000..6770724 --- /dev/null +++ b/data/candidates/chr9/111_256_graph.txt @@ -0,0 +1,651 @@ +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 82 +82 83 +83 84 +84 85 +85 86 +86 87 +87 88 +88 89 +89 90 +90 91 +91 92 +92 93 +93 94 +94 95 +95 96 +96 97 +97 98 +98 99 +99 100 +100 101 +101 102 +102 103 +103 104 +104 105 +105 106 +106 107 +107 108 +108 109 +109 110 +110 0 +57 95 +0 42 +27 63 +6 42 +9 18 +13 41 +63 81 +81 107 +0 6 +88 106 +19 69 +15 18 +34 41 +57 103 +40 44 +72 107 +14 25 +33 37 +2 6 +19 71 +47 53 +19 65 +58 86 +28 38 +52 63 +65 76 +90 94 +42 57 +4 110 +29 41 +9 19 +91 103 +46 56 +87 107 +76 80 +75 107 +9 41 +40 46 +92 99 +28 39 +40 52 +42 56 +64 81 +7 19 +30 33 +2 110 +92 94 +5 7 +57 97 +19 25 +83 85 +91 94 +92 100 +15 20 +35 39 +5 72 +65 67 +72 75 +57 62 +20 25 +65 71 +53 55 +11 15 +81 84 +0 104 +3 5 +94 96 +9 13 +61 63 +42 103 +2 5 +56 63 +5 109 +59 83 +46 49 +65 69 +40 43 +15 23 +32 37 +108 110 +46 52 +92 102 +91 104 +101 103 +65 72 +86 90 +27 40 +22 24 +64 79 +58 94 +57 60 +52 54 +47 50 +88 107 +105 107 +9 16 +65 78 +19 63 +94 97 +30 32 +72 76 +81 86 +74 76 +22 25 +27 29 +104 106 +82 84 +36 39 +6 9 +77 80 +63 82 +72 109 +107 110 +107 109 +49 51 +19 64 +14 27 +98 103 +30 38 +90 104 +46 53 +89 104 +29 33 +60 62 +60 63 +60 83 +86 94 +28 30 +59 86 +84 86 +14 29 +92 97 +35 40 +9 42 +33 36 +29 34 +68 70 +7 72 +67 69 +100 103 +27 52 +25 27 +10 12 +51 53 +97 103 +104 107 +63 83 +53 56 +15 22 +88 104 +88 90 +41 43 +15 17 +93 97 +76 78 +19 26 +30 37 +10 13 +11 16 +47 51 +92 103 +87 90 +3 110 +46 51 +5 110 +36 38 +33 35 +57 59 +48 50 +10 16 +20 22 +15 24 +80 107 +28 40 +0 103 +43 56 +76 107 +57 94 +13 15 +52 55 +44 46 +19 27 +0 107 +73 76 +66 68 +99 103 +15 25 +68 71 +14 41 +1 6 +15 21 +43 45 +79 81 +9 17 +34 40 +95 97 +59 85 +6 8 +65 68 +11 13 +0 2 +65 79 +77 79 +31 33 +92 98 +46 48 +7 71 +72 74 +52 56 +86 107 +18 20 +69 71 +100 102 +7 9 +45 56 +57 63 +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 82 +82 83 +83 84 +84 85 +85 86 +86 87 +87 88 +88 89 +89 90 +90 91 +91 92 +92 93 +93 94 +94 95 +95 96 +96 97 +97 98 +98 99 +99 100 +100 101 +101 102 +102 103 +103 104 +104 105 +105 106 +106 107 +107 108 +108 109 +109 110 +110 0 +21 88 +27 61 +86 104 +13 90 +21 31 +45 88 +99 109 +46 60 +1 108 +52 57 +11 78 +35 37 +10 80 +21 76 +65 88 +45 48 +61 88 +4 6 +12 110 +27 31 +27 57 +22 30 +11 77 +65 85 +39 56 +69 72 +21 41 +80 85 +95 109 +43 51 +25 74 +61 72 +69 76 +90 110 +65 77 +100 105 +5 8 +17 19 +4 82 +27 30 +63 67 +4 10 +9 110 +47 58 +51 56 +88 101 +67 76 +59 61 +14 21 +64 67 +0 8 +2 7 +5 9 +4 86 +1 109 +20 88 +21 32 +14 90 +45 50 +3 6 +24 29 +91 110 +2 4 +27 37 +50 58 +97 99 +42 45 +4 81 +88 92 +4 107 +21 33 +12 77 +99 106 +80 83 +64 66 +70 75 +19 21 +5 10 +25 76 +91 95 +51 57 +39 43 +11 80 +21 36 +91 109 +27 39 +70 76 +2 108 +27 74 +34 36 +13 110 +13 77 +40 42 +17 89 +21 39 +32 34 +23 25 +47 59 +57 61 +4 106 +21 37 +21 77 +67 77 +24 27 +27 73 +89 91 +51 55 +21 40 +32 35 +50 57 +94 100 +42 88 +89 92 +65 87 +45 47 +14 89 +88 103 +68 72 +0 9 +97 109 +19 89 +49 58 +0 7 +94 99 +44 50 +86 105 +95 98 +62 67 +78 85 +23 30 +88 93 +27 72 +22 31 +88 100 +88 102 +26 74 +47 60 +95 99 +21 34 +103 105 +73 75 +85 87 +86 88 +61 65 +106 109 +23 76 +10 81 +14 77 +10 110 +62 68 +4 84 +93 100 +71 73 +24 26 +31 35 +19 88 +16 18 +14 18 +66 77 +78 80 +80 84 +96 98 +27 38 +58 61 +71 75 +15 89 +27 35 +14 19 +4 85 +39 51 +24 30 +80 82 +51 54 +47 49 +39 42 +14 16 +54 56 +68 76 +60 88 +25 75 +11 110 +54 57 +42 44 +70 72 +61 68 +86 106 +4 83 +24 28 +2 107 +101 105 +63 65 +41 88 +3 7 +79 85 +53 57 +77 85 +106 108 +62 65 +37 39 +96 109 +46 88 +22 76 +102 105 +1 110 +99 105 +45 49 +27 56 +43 50 +86 103 +91 93 +1 7 +16 89 +93 95 diff --git a/data/candidates/chr9/111_256_partitions.txt b/data/candidates/chr9/111_256_partitions.txt new file mode 100644 index 0000000..ab2d717 --- /dev/null +++ b/data/candidates/chr9/111_256_partitions.txt @@ -0,0 +1,652 @@ +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 82 +82 83 +83 84 +84 85 +85 86 +86 87 +87 88 +88 89 +89 90 +90 91 +91 92 +92 93 +93 94 +94 95 +95 96 +96 97 +97 98 +98 99 +99 100 +100 101 +101 102 +102 103 +103 104 +104 105 +105 106 +106 107 +107 108 +108 109 +109 110 +110 0 +57 95 +0 42 +27 63 +6 42 +9 18 +13 41 +63 81 +81 107 +0 6 +88 106 +19 69 +15 18 +34 41 +57 103 +40 44 +72 107 +14 25 +33 37 +2 6 +19 71 +47 53 +19 65 +58 86 +28 38 +52 63 +65 76 +90 94 +42 57 +4 110 +29 41 +9 19 +91 103 +46 56 +87 107 +76 80 +75 107 +9 41 +40 46 +92 99 +28 39 +40 52 +42 56 +64 81 +7 19 +30 33 +2 110 +92 94 +5 7 +57 97 +19 25 +83 85 +91 94 +92 100 +15 20 +35 39 +5 72 +65 67 +72 75 +57 62 +20 25 +65 71 +53 55 +11 15 +81 84 +0 104 +3 5 +94 96 +9 13 +61 63 +42 103 +2 5 +56 63 +5 109 +59 83 +46 49 +65 69 +40 43 +15 23 +32 37 +108 110 +46 52 +92 102 +91 104 +101 103 +65 72 +86 90 +27 40 +22 24 +64 79 +58 94 +57 60 +52 54 +47 50 +88 107 +105 107 +9 16 +65 78 +19 63 +94 97 +30 32 +72 76 +81 86 +74 76 +22 25 +27 29 +104 106 +82 84 +36 39 +6 9 +77 80 +63 82 +72 109 +107 110 +107 109 +49 51 +19 64 +14 27 +98 103 +30 38 +90 104 +46 53 +89 104 +29 33 +60 62 +60 63 +60 83 +86 94 +28 30 +59 86 +84 86 +14 29 +92 97 +35 40 +9 42 +33 36 +29 34 +68 70 +7 72 +67 69 +100 103 +27 52 +25 27 +10 12 +51 53 +97 103 +104 107 +63 83 +53 56 +15 22 +88 104 +88 90 +41 43 +15 17 +93 97 +76 78 +19 26 +30 37 +10 13 +11 16 +47 51 +92 103 +87 90 +3 110 +46 51 +5 110 +36 38 +33 35 +57 59 +48 50 +10 16 +20 22 +15 24 +80 107 +28 40 +0 103 +43 56 +76 107 +57 94 +13 15 +52 55 +44 46 +19 27 +0 107 +73 76 +66 68 +99 103 +15 25 +68 71 +14 41 +1 6 +15 21 +43 45 +79 81 +9 17 +34 40 +95 97 +59 85 +6 8 +65 68 +11 13 +0 2 +65 79 +77 79 +31 33 +92 98 +46 48 +7 71 +72 74 +52 56 +86 107 +18 20 +69 71 +100 102 +7 9 +45 56 +57 63 + +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 82 +82 83 +83 84 +84 85 +85 86 +86 87 +87 88 +88 89 +89 90 +90 91 +91 92 +92 93 +93 94 +94 95 +95 96 +96 97 +97 98 +98 99 +99 100 +100 101 +101 102 +102 103 +103 104 +104 105 +105 106 +106 107 +107 108 +108 109 +109 110 +110 0 +21 88 +27 61 +86 104 +13 90 +21 31 +45 88 +99 109 +46 60 +1 108 +52 57 +11 78 +35 37 +10 80 +21 76 +65 88 +45 48 +61 88 +4 6 +12 110 +27 31 +27 57 +22 30 +11 77 +65 85 +39 56 +69 72 +21 41 +80 85 +95 109 +43 51 +25 74 +61 72 +69 76 +90 110 +65 77 +100 105 +5 8 +17 19 +4 82 +27 30 +63 67 +4 10 +9 110 +47 58 +51 56 +88 101 +67 76 +59 61 +14 21 +64 67 +0 8 +2 7 +5 9 +4 86 +1 109 +20 88 +21 32 +14 90 +45 50 +3 6 +24 29 +91 110 +2 4 +27 37 +50 58 +97 99 +42 45 +4 81 +88 92 +4 107 +21 33 +12 77 +99 106 +80 83 +64 66 +70 75 +19 21 +5 10 +25 76 +91 95 +51 57 +39 43 +11 80 +21 36 +91 109 +27 39 +70 76 +2 108 +27 74 +34 36 +13 110 +13 77 +40 42 +17 89 +21 39 +32 34 +23 25 +47 59 +57 61 +4 106 +21 37 +21 77 +67 77 +24 27 +27 73 +89 91 +51 55 +21 40 +32 35 +50 57 +94 100 +42 88 +89 92 +65 87 +45 47 +14 89 +88 103 +68 72 +0 9 +97 109 +19 89 +49 58 +0 7 +94 99 +44 50 +86 105 +95 98 +62 67 +78 85 +23 30 +88 93 +27 72 +22 31 +88 100 +88 102 +26 74 +47 60 +95 99 +21 34 +103 105 +73 75 +85 87 +86 88 +61 65 +106 109 +23 76 +10 81 +14 77 +10 110 +62 68 +4 84 +93 100 +71 73 +24 26 +31 35 +19 88 +16 18 +14 18 +66 77 +78 80 +80 84 +96 98 +27 38 +58 61 +71 75 +15 89 +27 35 +14 19 +4 85 +39 51 +24 30 +80 82 +51 54 +47 49 +39 42 +14 16 +54 56 +68 76 +60 88 +25 75 +11 110 +54 57 +42 44 +70 72 +61 68 +86 106 +4 83 +24 28 +2 107 +101 105 +63 65 +41 88 +3 7 +79 85 +53 57 +77 85 +106 108 +62 65 +37 39 +96 109 +46 88 +22 76 +102 105 +1 110 +99 105 +45 49 +27 56 +43 50 +86 103 +91 93 +1 7 +16 89 +93 95 diff --git a/data/candidates/chr9/111_32_graph.txt b/data/candidates/chr9/111_32_graph.txt new file mode 100644 index 0000000..0b57b2f --- /dev/null +++ b/data/candidates/chr9/111_32_graph.txt @@ -0,0 +1,648 @@ +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 82 +82 83 +83 84 +84 85 +85 86 +86 87 +87 88 +88 89 +89 90 +90 91 +91 92 +92 93 +93 94 +94 95 +95 96 +96 97 +97 98 +98 99 +99 100 +100 101 +101 102 +102 103 +103 104 +104 105 +105 106 +106 107 +107 108 +108 109 +109 110 +110 0 +7 106 +7 40 +76 99 +31 83 +64 69 +84 103 +39 54 +42 65 +22 83 +92 101 +40 110 +11 24 +21 23 +42 62 +84 99 +89 101 +24 39 +90 99 +31 33 +42 73 +50 60 +50 53 +19 22 +63 82 +84 102 +41 100 +46 53 +50 52 +102 107 +14 21 +91 94 +105 107 +102 109 +7 107 +18 22 +18 103 +103 105 +70 77 +25 30 +93 101 +42 68 +8 14 +45 53 +90 92 +41 73 +47 61 +60 82 +24 31 +64 66 +90 95 +85 89 +32 38 +76 83 +93 96 +33 82 +62 65 +78 83 +39 42 +44 46 +83 103 +55 57 +72 75 +3 40 +4 108 +38 82 +42 61 +50 55 +9 11 +34 38 +52 55 +9 24 +5 40 +36 82 +72 76 +24 40 +31 38 +42 67 +43 47 +78 80 +41 110 +88 99 +102 104 +27 38 +69 82 +75 100 +9 14 +76 84 +71 73 +15 19 +10 24 +54 59 +93 98 +3 5 +80 83 +50 61 +38 59 +90 96 +94 96 +17 19 +69 81 +14 16 +14 17 +3 109 +28 30 +38 54 +91 95 +39 44 +1 110 +14 103 +15 20 +9 40 +47 49 +101 110 +48 61 +1 3 +27 29 +14 23 +22 31 +89 102 +38 60 +46 50 +42 66 +14 106 +64 68 +71 76 +70 76 +17 103 +54 57 +62 82 +64 82 +26 28 +56 58 +80 82 +98 101 +107 109 +52 54 +24 26 +85 88 +58 60 +2 109 +91 93 +75 99 +88 90 +30 38 +49 61 +61 82 +12 14 +0 109 +41 74 +26 39 +66 68 +24 30 +86 88 +6 40 +102 105 +31 82 +77 81 +22 24 +42 71 +35 38 +6 108 +26 38 +4 6 +39 41 +51 53 +68 71 +43 46 +39 53 +103 106 +20 22 +7 108 +8 40 +96 99 +34 82 +13 23 +12 23 +57 59 +84 87 +9 12 +37 82 +85 102 +93 97 +79 83 +39 45 +43 61 +3 110 +15 21 +84 88 +69 71 +0 2 +50 56 +76 78 +18 83 +7 14 +62 64 +15 17 +85 87 +34 36 +29 38 +89 92 +47 50 +102 110 +33 38 +42 44 +98 100 +78 81 +97 99 +36 38 +72 74 +25 28 +70 81 +56 60 +12 24 +100 110 +74 100 +4 109 +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 82 +82 83 +83 84 +84 85 +85 86 +86 87 +87 88 +88 89 +89 90 +90 91 +91 92 +92 93 +93 94 +94 95 +95 96 +96 97 +97 98 +98 99 +99 100 +100 101 +101 102 +102 103 +103 104 +104 105 +105 106 +106 107 +107 108 +108 109 +109 110 +110 0 +4 65 +21 64 +64 106 +38 44 +2 74 +65 85 +40 107 +8 26 +67 83 +86 89 +24 61 +48 55 +98 107 +50 57 +37 110 +15 26 +91 104 +90 108 +4 16 +51 55 +80 89 +6 26 +32 46 +26 60 +34 44 +5 10 +1 90 +69 75 +32 47 +28 33 +73 75 +94 103 +59 61 +50 58 +97 103 +75 81 +95 97 +41 56 +6 27 +40 109 +94 97 +45 55 +87 104 +3 28 +85 105 +56 106 +58 64 +33 36 +77 90 +3 37 +57 106 +22 61 +91 107 +6 9 +48 60 +41 44 +80 84 +22 25 +86 104 +61 64 +76 79 +26 61 +47 55 +58 63 +102 106 +91 96 +67 73 +4 13 +76 90 +59 62 +16 25 +3 36 +8 10 +4 64 +101 103 +10 13 +79 90 +8 12 +47 60 +3 73 +30 47 +68 81 +0 3 +65 83 +48 51 +85 106 +66 83 +41 106 +16 64 +77 79 +52 57 +65 106 +16 26 +28 47 +92 94 +53 55 +18 64 +87 90 +14 26 +98 103 +40 42 +80 90 +19 25 +3 67 +92 103 +100 106 +7 9 +5 13 +67 81 +99 101 +11 13 +38 43 +44 55 +100 102 +39 43 +54 56 +99 103 +40 43 +2 76 +76 80 +67 71 +36 44 +4 27 +48 59 +4 15 +18 25 +104 106 +86 105 +34 46 +41 43 +21 25 +71 75 +3 66 +45 47 +50 59 +87 89 +29 33 +4 14 +44 56 +93 95 +58 62 +29 32 +31 47 +3 27 +91 103 +28 60 +65 84 +18 20 +67 69 +81 84 +29 47 +84 86 +92 96 +29 31 +76 81 +35 44 +13 26 +67 82 +82 84 +37 109 +20 64 +32 34 +48 50 +20 25 +2 73 +27 60 +16 18 +12 26 +23 25 +1 109 +6 10 +39 109 +58 106 +10 12 +74 76 +92 95 +100 107 +53 56 +23 61 +33 35 +41 107 +49 59 +84 89 +3 65 +90 104 +37 44 +53 57 +1 108 +68 75 +2 90 +78 90 +38 109 +5 27 +91 98 +99 107 +0 37 +91 108 +17 64 +96 98 +34 45 +22 64 +51 57 +70 75 +28 36 +61 63 +67 70 +6 8 +40 108 +25 61 +67 72 diff --git a/data/candidates/chr9/111_32_partitions.txt b/data/candidates/chr9/111_32_partitions.txt new file mode 100644 index 0000000..dfaa884 --- /dev/null +++ b/data/candidates/chr9/111_32_partitions.txt @@ -0,0 +1,649 @@ +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 82 +82 83 +83 84 +84 85 +85 86 +86 87 +87 88 +88 89 +89 90 +90 91 +91 92 +92 93 +93 94 +94 95 +95 96 +96 97 +97 98 +98 99 +99 100 +100 101 +101 102 +102 103 +103 104 +104 105 +105 106 +106 107 +107 108 +108 109 +109 110 +110 0 +7 106 +7 40 +76 99 +31 83 +64 69 +84 103 +39 54 +42 65 +22 83 +92 101 +40 110 +11 24 +21 23 +42 62 +84 99 +89 101 +24 39 +90 99 +31 33 +42 73 +50 60 +50 53 +19 22 +63 82 +84 102 +41 100 +46 53 +50 52 +102 107 +14 21 +91 94 +105 107 +102 109 +7 107 +18 22 +18 103 +103 105 +70 77 +25 30 +93 101 +42 68 +8 14 +45 53 +90 92 +41 73 +47 61 +60 82 +24 31 +64 66 +90 95 +85 89 +32 38 +76 83 +93 96 +33 82 +62 65 +78 83 +39 42 +44 46 +83 103 +55 57 +72 75 +3 40 +4 108 +38 82 +42 61 +50 55 +9 11 +34 38 +52 55 +9 24 +5 40 +36 82 +72 76 +24 40 +31 38 +42 67 +43 47 +78 80 +41 110 +88 99 +102 104 +27 38 +69 82 +75 100 +9 14 +76 84 +71 73 +15 19 +10 24 +54 59 +93 98 +3 5 +80 83 +50 61 +38 59 +90 96 +94 96 +17 19 +69 81 +14 16 +14 17 +3 109 +28 30 +38 54 +91 95 +39 44 +1 110 +14 103 +15 20 +9 40 +47 49 +101 110 +48 61 +1 3 +27 29 +14 23 +22 31 +89 102 +38 60 +46 50 +42 66 +14 106 +64 68 +71 76 +70 76 +17 103 +54 57 +62 82 +64 82 +26 28 +56 58 +80 82 +98 101 +107 109 +52 54 +24 26 +85 88 +58 60 +2 109 +91 93 +75 99 +88 90 +30 38 +49 61 +61 82 +12 14 +0 109 +41 74 +26 39 +66 68 +24 30 +86 88 +6 40 +102 105 +31 82 +77 81 +22 24 +42 71 +35 38 +6 108 +26 38 +4 6 +39 41 +51 53 +68 71 +43 46 +39 53 +103 106 +20 22 +7 108 +8 40 +96 99 +34 82 +13 23 +12 23 +57 59 +84 87 +9 12 +37 82 +85 102 +93 97 +79 83 +39 45 +43 61 +3 110 +15 21 +84 88 +69 71 +0 2 +50 56 +76 78 +18 83 +7 14 +62 64 +15 17 +85 87 +34 36 +29 38 +89 92 +47 50 +102 110 +33 38 +42 44 +98 100 +78 81 +97 99 +36 38 +72 74 +25 28 +70 81 +56 60 +12 24 +100 110 +74 100 +4 109 + +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 82 +82 83 +83 84 +84 85 +85 86 +86 87 +87 88 +88 89 +89 90 +90 91 +91 92 +92 93 +93 94 +94 95 +95 96 +96 97 +97 98 +98 99 +99 100 +100 101 +101 102 +102 103 +103 104 +104 105 +105 106 +106 107 +107 108 +108 109 +109 110 +110 0 +4 65 +21 64 +64 106 +38 44 +2 74 +65 85 +40 107 +8 26 +67 83 +86 89 +24 61 +48 55 +98 107 +50 57 +37 110 +15 26 +91 104 +90 108 +4 16 +51 55 +80 89 +6 26 +32 46 +26 60 +34 44 +5 10 +1 90 +69 75 +32 47 +28 33 +73 75 +94 103 +59 61 +50 58 +97 103 +75 81 +95 97 +41 56 +6 27 +40 109 +94 97 +45 55 +87 104 +3 28 +85 105 +56 106 +58 64 +33 36 +77 90 +3 37 +57 106 +22 61 +91 107 +6 9 +48 60 +41 44 +80 84 +22 25 +86 104 +61 64 +76 79 +26 61 +47 55 +58 63 +102 106 +91 96 +67 73 +4 13 +76 90 +59 62 +16 25 +3 36 +8 10 +4 64 +101 103 +10 13 +79 90 +8 12 +47 60 +3 73 +30 47 +68 81 +0 3 +65 83 +48 51 +85 106 +66 83 +41 106 +16 64 +77 79 +52 57 +65 106 +16 26 +28 47 +92 94 +53 55 +18 64 +87 90 +14 26 +98 103 +40 42 +80 90 +19 25 +3 67 +92 103 +100 106 +7 9 +5 13 +67 81 +99 101 +11 13 +38 43 +44 55 +100 102 +39 43 +54 56 +99 103 +40 43 +2 76 +76 80 +67 71 +36 44 +4 27 +48 59 +4 15 +18 25 +104 106 +86 105 +34 46 +41 43 +21 25 +71 75 +3 66 +45 47 +50 59 +87 89 +29 33 +4 14 +44 56 +93 95 +58 62 +29 32 +31 47 +3 27 +91 103 +28 60 +65 84 +18 20 +67 69 +81 84 +29 47 +84 86 +92 96 +29 31 +76 81 +35 44 +13 26 +67 82 +82 84 +37 109 +20 64 +32 34 +48 50 +20 25 +2 73 +27 60 +16 18 +12 26 +23 25 +1 109 +6 10 +39 109 +58 106 +10 12 +74 76 +92 95 +100 107 +53 56 +23 61 +33 35 +41 107 +49 59 +84 89 +3 65 +90 104 +37 44 +53 57 +1 108 +68 75 +2 90 +78 90 +38 109 +5 27 +91 98 +99 107 +0 37 +91 108 +17 64 +96 98 +34 45 +22 64 +51 57 +70 75 +28 36 +61 63 +67 70 +6 8 +40 108 +25 61 +67 72 diff --git a/data/candidates/chr9/114_1_graph.txt b/data/candidates/chr9/114_1_graph.txt new file mode 100644 index 0000000..443c8bc --- /dev/null +++ b/data/candidates/chr9/114_1_graph.txt @@ -0,0 +1,670 @@ +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 82 +82 83 +83 84 +84 85 +85 86 +86 87 +87 88 +88 89 +89 90 +90 91 +91 92 +92 93 +93 94 +94 95 +95 96 +96 97 +97 98 +98 99 +99 100 +100 101 +101 102 +102 103 +103 104 +104 105 +105 106 +106 107 +107 108 +108 109 +109 110 +110 111 +111 112 +112 113 +113 0 +33 87 +37 93 +4 104 +18 33 +83 92 +20 96 +7 101 +45 76 +32 93 +74 92 +27 30 +7 33 +87 95 +13 96 +58 93 +2 9 +49 75 +57 71 +42 85 +11 105 +0 111 +61 74 +51 57 +38 86 +57 62 +19 24 +100 102 +34 37 +67 73 +8 10 +13 18 +6 8 +20 95 +89 95 +95 97 +80 82 +42 53 +10 14 +1 9 +41 58 +18 31 +10 18 +45 52 +28 30 +22 95 +11 112 +78 85 +5 9 +9 112 +11 98 +1 106 +24 93 +19 21 +84 92 +35 38 +90 94 +8 33 +43 77 +22 24 +68 72 +33 86 +10 17 +64 68 +60 74 +100 104 +48 50 +64 67 +98 104 +87 97 +25 93 +45 48 +63 67 +63 68 +39 85 +51 56 +7 100 +59 92 +62 68 +61 73 +83 85 +39 86 +45 50 +60 92 +65 68 +91 94 +62 73 +53 57 +10 15 +107 111 +24 28 +11 107 +19 23 +86 88 +1 104 +57 75 +50 75 +77 83 +1 107 +3 9 +11 14 +93 95 +37 39 +24 30 +12 14 +7 103 +90 92 +25 28 +19 31 +26 31 +18 20 +74 77 +13 17 +51 53 +77 81 +12 96 +45 49 +41 57 +12 98 +59 61 +102 104 +43 53 +5 8 +53 55 +18 96 +42 78 +4 7 +35 86 +33 97 +33 93 +71 73 +98 105 +97 100 +47 50 +51 55 +51 54 +10 16 +109 111 +88 90 +11 110 +51 75 +65 67 +74 76 +91 93 +62 69 +1 105 +40 58 +14 17 +44 77 +68 70 +33 35 +82 85 +108 110 +44 52 +90 95 +58 92 +70 72 +7 102 +9 11 +85 90 +86 90 +99 104 +44 76 +71 74 +57 70 +62 67 +110 112 +24 95 +44 53 +4 103 +8 18 +71 75 +77 79 +19 22 +59 62 +25 27 +53 56 +78 82 +26 93 +41 85 +107 110 +87 89 +36 38 +67 72 +2 4 +27 31 +46 50 +57 69 +77 80 +57 59 +81 83 +39 93 +49 76 +40 85 +14 16 +24 29 +46 48 +66 68 +85 92 +39 58 +96 98 +45 51 +19 30 +35 37 +1 4 +20 22 +31 93 +34 93 +0 112 +11 106 +43 78 +18 32 +9 113 +4 6 +77 92 +1 111 +108 111 +3 5 +0 9 +98 100 +79 82 +7 97 +42 57 +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 82 +82 83 +83 84 +84 85 +85 86 +86 87 +87 88 +88 89 +89 90 +90 91 +91 92 +92 93 +93 94 +94 95 +95 96 +96 97 +97 98 +98 99 +99 100 +100 101 +101 102 +102 103 +103 104 +104 105 +105 106 +106 107 +107 108 +108 109 +109 110 +110 111 +111 112 +112 113 +113 0 +70 105 +57 95 +1 37 +25 35 +73 98 +7 48 +70 89 +46 106 +51 109 +9 24 +67 95 +5 33 +5 51 +81 84 +86 95 +61 63 +8 39 +82 86 +5 36 +51 66 +5 112 +51 69 +86 97 +77 86 +15 36 +14 20 +41 45 +81 89 +9 30 +80 84 +95 105 +51 107 +39 106 +76 80 +58 95 +70 75 +31 33 +17 25 +53 63 +8 40 +16 35 +72 101 +59 64 +49 105 +8 37 +7 51 +53 60 +40 42 +28 35 +17 22 +73 77 +72 99 +40 48 +67 91 +96 101 +39 44 +72 102 +39 112 +40 44 +52 57 +50 70 +13 22 +41 43 +39 107 +51 106 +10 36 +87 93 +17 19 +7 32 +13 21 +9 28 +39 109 +64 95 +9 31 +9 26 +23 25 +12 36 +29 35 +1 113 +88 91 +78 80 +13 20 +0 3 +17 20 +61 64 +17 35 +51 111 +56 58 +7 50 +52 66 +80 86 +52 63 +82 89 +64 66 +15 35 +3 112 +52 64 +37 112 +87 94 +45 106 +14 36 +1 3 +47 106 +1 36 +53 58 +13 23 +80 85 +67 69 +101 104 +52 95 +89 91 +70 73 +34 36 +54 58 +30 33 +84 86 +5 111 +97 101 +69 91 +9 36 +49 106 +17 23 +67 92 +69 89 +52 105 +6 32 +72 105 +9 37 +47 49 +41 46 +60 63 +39 108 +73 86 +29 33 +27 35 +11 36 +14 18 +6 51 +51 68 +0 2 +86 94 +7 31 +9 29 +6 33 +107 109 +60 62 +15 18 +38 112 +24 26 +55 57 +73 76 +58 64 +72 100 +92 95 +14 19 +82 87 +41 48 +95 104 +76 89 +11 24 +88 93 +41 44 +52 55 +51 67 +65 95 +72 103 +26 35 +66 95 +52 54 +73 99 +83 86 +78 86 +73 75 +8 31 +41 47 +58 60 +97 99 +101 103 +11 23 +17 21 +40 43 +99 101 +86 96 +82 84 +50 105 +29 34 +3 113 +12 23 +51 105 +8 38 +7 40 +13 36 +76 79 +51 70 +26 28 +70 74 +44 106 +103 105 +51 110 +4 36 +75 89 +1 112 +76 81 +5 34 +60 64 +109 112 +69 90 +15 17 +76 78 +7 49 +4 112 +92 94 +10 24 +82 88 +73 97 +3 36 +55 58 +96 104 +71 105 +88 92 diff --git a/data/candidates/chr9/114_1_partitions.txt b/data/candidates/chr9/114_1_partitions.txt new file mode 100644 index 0000000..e29ce63 --- /dev/null +++ b/data/candidates/chr9/114_1_partitions.txt @@ -0,0 +1,671 @@ +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 82 +82 83 +83 84 +84 85 +85 86 +86 87 +87 88 +88 89 +89 90 +90 91 +91 92 +92 93 +93 94 +94 95 +95 96 +96 97 +97 98 +98 99 +99 100 +100 101 +101 102 +102 103 +103 104 +104 105 +105 106 +106 107 +107 108 +108 109 +109 110 +110 111 +111 112 +112 113 +113 0 +33 87 +37 93 +4 104 +18 33 +83 92 +20 96 +7 101 +45 76 +32 93 +74 92 +27 30 +7 33 +87 95 +13 96 +58 93 +2 9 +49 75 +57 71 +42 85 +11 105 +0 111 +61 74 +51 57 +38 86 +57 62 +19 24 +100 102 +34 37 +67 73 +8 10 +13 18 +6 8 +20 95 +89 95 +95 97 +80 82 +42 53 +10 14 +1 9 +41 58 +18 31 +10 18 +45 52 +28 30 +22 95 +11 112 +78 85 +5 9 +9 112 +11 98 +1 106 +24 93 +19 21 +84 92 +35 38 +90 94 +8 33 +43 77 +22 24 +68 72 +33 86 +10 17 +64 68 +60 74 +100 104 +48 50 +64 67 +98 104 +87 97 +25 93 +45 48 +63 67 +63 68 +39 85 +51 56 +7 100 +59 92 +62 68 +61 73 +83 85 +39 86 +45 50 +60 92 +65 68 +91 94 +62 73 +53 57 +10 15 +107 111 +24 28 +11 107 +19 23 +86 88 +1 104 +57 75 +50 75 +77 83 +1 107 +3 9 +11 14 +93 95 +37 39 +24 30 +12 14 +7 103 +90 92 +25 28 +19 31 +26 31 +18 20 +74 77 +13 17 +51 53 +77 81 +12 96 +45 49 +41 57 +12 98 +59 61 +102 104 +43 53 +5 8 +53 55 +18 96 +42 78 +4 7 +35 86 +33 97 +33 93 +71 73 +98 105 +97 100 +47 50 +51 55 +51 54 +10 16 +109 111 +88 90 +11 110 +51 75 +65 67 +74 76 +91 93 +62 69 +1 105 +40 58 +14 17 +44 77 +68 70 +33 35 +82 85 +108 110 +44 52 +90 95 +58 92 +70 72 +7 102 +9 11 +85 90 +86 90 +99 104 +44 76 +71 74 +57 70 +62 67 +110 112 +24 95 +44 53 +4 103 +8 18 +71 75 +77 79 +19 22 +59 62 +25 27 +53 56 +78 82 +26 93 +41 85 +107 110 +87 89 +36 38 +67 72 +2 4 +27 31 +46 50 +57 69 +77 80 +57 59 +81 83 +39 93 +49 76 +40 85 +14 16 +24 29 +46 48 +66 68 +85 92 +39 58 +96 98 +45 51 +19 30 +35 37 +1 4 +20 22 +31 93 +34 93 +0 112 +11 106 +43 78 +18 32 +9 113 +4 6 +77 92 +1 111 +108 111 +3 5 +0 9 +98 100 +79 82 +7 97 +42 57 + +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 82 +82 83 +83 84 +84 85 +85 86 +86 87 +87 88 +88 89 +89 90 +90 91 +91 92 +92 93 +93 94 +94 95 +95 96 +96 97 +97 98 +98 99 +99 100 +100 101 +101 102 +102 103 +103 104 +104 105 +105 106 +106 107 +107 108 +108 109 +109 110 +110 111 +111 112 +112 113 +113 0 +70 105 +57 95 +1 37 +25 35 +73 98 +7 48 +70 89 +46 106 +51 109 +9 24 +67 95 +5 33 +5 51 +81 84 +86 95 +61 63 +8 39 +82 86 +5 36 +51 66 +5 112 +51 69 +86 97 +77 86 +15 36 +14 20 +41 45 +81 89 +9 30 +80 84 +95 105 +51 107 +39 106 +76 80 +58 95 +70 75 +31 33 +17 25 +53 63 +8 40 +16 35 +72 101 +59 64 +49 105 +8 37 +7 51 +53 60 +40 42 +28 35 +17 22 +73 77 +72 99 +40 48 +67 91 +96 101 +39 44 +72 102 +39 112 +40 44 +52 57 +50 70 +13 22 +41 43 +39 107 +51 106 +10 36 +87 93 +17 19 +7 32 +13 21 +9 28 +39 109 +64 95 +9 31 +9 26 +23 25 +12 36 +29 35 +1 113 +88 91 +78 80 +13 20 +0 3 +17 20 +61 64 +17 35 +51 111 +56 58 +7 50 +52 66 +80 86 +52 63 +82 89 +64 66 +15 35 +3 112 +52 64 +37 112 +87 94 +45 106 +14 36 +1 3 +47 106 +1 36 +53 58 +13 23 +80 85 +67 69 +101 104 +52 95 +89 91 +70 73 +34 36 +54 58 +30 33 +84 86 +5 111 +97 101 +69 91 +9 36 +49 106 +17 23 +67 92 +69 89 +52 105 +6 32 +72 105 +9 37 +47 49 +41 46 +60 63 +39 108 +73 86 +29 33 +27 35 +11 36 +14 18 +6 51 +51 68 +0 2 +86 94 +7 31 +9 29 +6 33 +107 109 +60 62 +15 18 +38 112 +24 26 +55 57 +73 76 +58 64 +72 100 +92 95 +14 19 +82 87 +41 48 +95 104 +76 89 +11 24 +88 93 +41 44 +52 55 +51 67 +65 95 +72 103 +26 35 +66 95 +52 54 +73 99 +83 86 +78 86 +73 75 +8 31 +41 47 +58 60 +97 99 +101 103 +11 23 +17 21 +40 43 +99 101 +86 96 +82 84 +50 105 +29 34 +3 113 +12 23 +51 105 +8 38 +7 40 +13 36 +76 79 +51 70 +26 28 +70 74 +44 106 +103 105 +51 110 +4 36 +75 89 +1 112 +76 81 +5 34 +60 64 +109 112 +69 90 +15 17 +76 78 +7 49 +4 112 +92 94 +10 24 +82 88 +73 97 +3 36 +55 58 +96 104 +71 105 +88 92 diff --git a/data/candidates/chr9/115_105_graph.txt b/data/candidates/chr9/115_105_graph.txt new file mode 100644 index 0000000..cc6f2ba --- /dev/null +++ b/data/candidates/chr9/115_105_graph.txt @@ -0,0 +1,677 @@ +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 82 +82 83 +83 84 +84 85 +85 86 +86 87 +87 88 +88 89 +89 90 +90 91 +91 92 +92 93 +93 94 +94 95 +95 96 +96 97 +97 98 +98 99 +99 100 +100 101 +101 102 +102 103 +103 104 +104 105 +105 106 +106 107 +107 108 +108 109 +109 110 +110 111 +111 112 +112 113 +113 114 +114 0 +13 79 +58 61 +58 93 +40 68 +34 103 +23 74 +42 46 +38 44 +71 74 +7 80 +74 93 +77 82 +81 96 +80 110 +9 106 +25 35 +36 73 +18 27 +58 102 +36 58 +90 95 +106 109 +36 70 +58 98 +17 103 +68 93 +81 89 +26 30 +28 33 +8 113 +42 62 +13 19 +40 66 +93 98 +58 66 +100 107 +93 97 +89 91 +23 27 +45 50 +74 86 +58 100 +6 110 +61 64 +23 77 +50 53 +80 96 +58 103 +57 62 +89 92 +5 111 +19 23 +82 84 +23 25 +37 56 +19 21 +47 50 +38 41 +44 53 +13 106 +7 113 +59 65 +22 78 +76 84 +28 31 +26 33 +10 12 +21 23 +91 93 +6 114 +17 27 +106 112 +51 53 +8 10 +1 5 +87 92 +28 32 +16 103 +51 54 +76 83 +3 112 +19 22 +30 33 +103 105 +38 70 +75 77 +62 65 +41 65 +51 57 +58 62 +25 27 +15 18 +42 47 +85 87 +82 87 +74 84 +45 47 +27 30 +81 95 +97 108 +25 74 +28 34 +71 93 +11 106 +87 89 +0 113 +102 105 +74 85 +14 105 +37 58 +19 27 +91 95 +26 34 +52 54 +29 31 +100 106 +49 62 +10 13 +4 112 +8 106 +78 80 +59 61 +54 56 +74 76 +48 50 +81 90 +74 87 +2 4 +39 68 +13 22 +24 74 +10 80 +80 108 +12 106 +23 75 +0 112 +7 110 +62 64 +99 107 +58 60 +25 73 +38 69 +8 80 +94 96 +38 53 +6 113 +5 114 +41 66 +98 108 +15 104 +101 105 +36 103 +77 81 +36 38 +42 45 +0 5 +37 55 +37 57 +50 62 +91 94 +108 110 +47 62 +99 108 +40 67 +39 41 +39 69 +22 77 +2 5 +70 72 +61 63 +54 57 +45 53 +27 34 +2 112 +34 36 +101 106 +77 80 +42 65 +53 55 +20 23 +16 104 +109 111 +82 85 +66 68 +72 74 +38 42 +10 79 +107 109 +5 112 +27 103 +14 104 +38 55 +28 30 +10 106 +8 112 +61 65 +14 18 +70 73 +15 17 +58 65 +5 110 +69 71 +13 105 +31 33 +77 83 +82 89 +94 97 +47 49 +96 108 +25 36 +0 2 +106 111 +100 102 +68 71 +74 92 +38 43 +13 18 +88 92 +22 79 +50 57 +25 34 +43 45 +58 99 +66 93 +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 82 +82 83 +83 84 +84 85 +85 86 +86 87 +87 88 +88 89 +89 90 +90 91 +91 92 +92 93 +93 94 +94 95 +95 96 +96 97 +97 98 +98 99 +99 100 +100 101 +101 102 +102 103 +103 104 +104 105 +105 106 +106 107 +107 108 +108 109 +109 110 +110 111 +111 112 +112 113 +113 114 +114 0 +5 58 +22 74 +2 104 +62 93 +15 103 +13 38 +51 66 +25 32 +19 77 +62 87 +32 36 +10 110 +28 36 +56 60 +63 72 +13 46 +38 68 +15 110 +51 60 +46 68 +9 113 +16 24 +15 37 +1 108 +22 27 +13 42 +3 7 +2 106 +8 11 +91 99 +15 35 +61 103 +100 103 +41 46 +0 3 +79 84 +53 58 +91 98 +77 89 +29 36 +61 95 +12 14 +98 102 +11 53 +50 66 +38 72 +85 88 +54 60 +38 46 +12 50 +51 65 +19 103 +82 88 +77 88 +15 34 +15 108 +62 73 +13 48 +62 95 +3 9 +64 69 +88 93 +18 22 +83 88 +54 58 +38 71 +2 103 +91 96 +78 82 +1 106 +90 92 +50 67 +7 11 +22 26 +20 75 +110 113 +12 110 +55 58 +74 79 +76 79 +36 74 +90 100 +60 64 +22 36 +44 46 +24 26 +79 87 +12 53 +0 110 +38 40 +11 58 +65 68 +32 34 +17 19 +48 68 +15 32 +3 6 +59 103 +22 75 +92 94 +10 112 +64 71 +96 103 +97 102 +9 114 +41 44 +18 20 +5 11 +13 40 +55 60 +60 62 +7 9 +60 103 +12 48 +27 29 +18 21 +79 83 +73 87 +16 22 +26 29 +33 35 +13 43 +35 37 +99 101 +16 23 +14 110 +4 58 +77 100 +62 94 +9 11 +3 59 +80 83 +53 60 +38 74 +33 36 +60 65 +97 103 +17 22 +26 32 +91 100 +40 46 +12 49 +56 58 +43 46 +3 114 +83 85 +22 24 +10 113 +56 59 +13 37 +12 51 +65 69 +88 90 +78 88 +49 67 +19 75 +79 81 +48 67 +5 7 +0 109 +92 95 +15 24 +92 96 +21 75 +31 36 +13 39 +57 59 +76 78 +103 107 +30 32 +13 41 +19 100 +65 67 +87 93 +37 74 +1 109 +111 113 +63 73 +4 6 +61 96 +15 25 +78 81 +84 87 +110 112 +80 82 +27 36 +104 107 +19 76 +41 45 +2 59 +15 19 +2 105 +46 48 +15 107 +101 103 +86 88 +15 109 +1 3 +52 60 +64 72 +104 106 +29 32 +73 79 +98 101 +68 70 +84 86 +91 97 +14 37 +42 44 +77 90 +47 68 +38 73 +4 59 +75 79 +16 19 +106 108 +12 52 +30 36 +110 114 +64 70 +11 110 +90 93 +60 63 diff --git a/data/candidates/chr9/115_105_partitions.txt b/data/candidates/chr9/115_105_partitions.txt new file mode 100644 index 0000000..b52caf5 --- /dev/null +++ b/data/candidates/chr9/115_105_partitions.txt @@ -0,0 +1,678 @@ +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 82 +82 83 +83 84 +84 85 +85 86 +86 87 +87 88 +88 89 +89 90 +90 91 +91 92 +92 93 +93 94 +94 95 +95 96 +96 97 +97 98 +98 99 +99 100 +100 101 +101 102 +102 103 +103 104 +104 105 +105 106 +106 107 +107 108 +108 109 +109 110 +110 111 +111 112 +112 113 +113 114 +114 0 +13 79 +58 61 +58 93 +40 68 +34 103 +23 74 +42 46 +38 44 +71 74 +7 80 +74 93 +77 82 +81 96 +80 110 +9 106 +25 35 +36 73 +18 27 +58 102 +36 58 +90 95 +106 109 +36 70 +58 98 +17 103 +68 93 +81 89 +26 30 +28 33 +8 113 +42 62 +13 19 +40 66 +93 98 +58 66 +100 107 +93 97 +89 91 +23 27 +45 50 +74 86 +58 100 +6 110 +61 64 +23 77 +50 53 +80 96 +58 103 +57 62 +89 92 +5 111 +19 23 +82 84 +23 25 +37 56 +19 21 +47 50 +38 41 +44 53 +13 106 +7 113 +59 65 +22 78 +76 84 +28 31 +26 33 +10 12 +21 23 +91 93 +6 114 +17 27 +106 112 +51 53 +8 10 +1 5 +87 92 +28 32 +16 103 +51 54 +76 83 +3 112 +19 22 +30 33 +103 105 +38 70 +75 77 +62 65 +41 65 +51 57 +58 62 +25 27 +15 18 +42 47 +85 87 +82 87 +74 84 +45 47 +27 30 +81 95 +97 108 +25 74 +28 34 +71 93 +11 106 +87 89 +0 113 +102 105 +74 85 +14 105 +37 58 +19 27 +91 95 +26 34 +52 54 +29 31 +100 106 +49 62 +10 13 +4 112 +8 106 +78 80 +59 61 +54 56 +74 76 +48 50 +81 90 +74 87 +2 4 +39 68 +13 22 +24 74 +10 80 +80 108 +12 106 +23 75 +0 112 +7 110 +62 64 +99 107 +58 60 +25 73 +38 69 +8 80 +94 96 +38 53 +6 113 +5 114 +41 66 +98 108 +15 104 +101 105 +36 103 +77 81 +36 38 +42 45 +0 5 +37 55 +37 57 +50 62 +91 94 +108 110 +47 62 +99 108 +40 67 +39 41 +39 69 +22 77 +2 5 +70 72 +61 63 +54 57 +45 53 +27 34 +2 112 +34 36 +101 106 +77 80 +42 65 +53 55 +20 23 +16 104 +109 111 +82 85 +66 68 +72 74 +38 42 +10 79 +107 109 +5 112 +27 103 +14 104 +38 55 +28 30 +10 106 +8 112 +61 65 +14 18 +70 73 +15 17 +58 65 +5 110 +69 71 +13 105 +31 33 +77 83 +82 89 +94 97 +47 49 +96 108 +25 36 +0 2 +106 111 +100 102 +68 71 +74 92 +38 43 +13 18 +88 92 +22 79 +50 57 +25 34 +43 45 +58 99 +66 93 + +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 82 +82 83 +83 84 +84 85 +85 86 +86 87 +87 88 +88 89 +89 90 +90 91 +91 92 +92 93 +93 94 +94 95 +95 96 +96 97 +97 98 +98 99 +99 100 +100 101 +101 102 +102 103 +103 104 +104 105 +105 106 +106 107 +107 108 +108 109 +109 110 +110 111 +111 112 +112 113 +113 114 +114 0 +5 58 +22 74 +2 104 +62 93 +15 103 +13 38 +51 66 +25 32 +19 77 +62 87 +32 36 +10 110 +28 36 +56 60 +63 72 +13 46 +38 68 +15 110 +51 60 +46 68 +9 113 +16 24 +15 37 +1 108 +22 27 +13 42 +3 7 +2 106 +8 11 +91 99 +15 35 +61 103 +100 103 +41 46 +0 3 +79 84 +53 58 +91 98 +77 89 +29 36 +61 95 +12 14 +98 102 +11 53 +50 66 +38 72 +85 88 +54 60 +38 46 +12 50 +51 65 +19 103 +82 88 +77 88 +15 34 +15 108 +62 73 +13 48 +62 95 +3 9 +64 69 +88 93 +18 22 +83 88 +54 58 +38 71 +2 103 +91 96 +78 82 +1 106 +90 92 +50 67 +7 11 +22 26 +20 75 +110 113 +12 110 +55 58 +74 79 +76 79 +36 74 +90 100 +60 64 +22 36 +44 46 +24 26 +79 87 +12 53 +0 110 +38 40 +11 58 +65 68 +32 34 +17 19 +48 68 +15 32 +3 6 +59 103 +22 75 +92 94 +10 112 +64 71 +96 103 +97 102 +9 114 +41 44 +18 20 +5 11 +13 40 +55 60 +60 62 +7 9 +60 103 +12 48 +27 29 +18 21 +79 83 +73 87 +16 22 +26 29 +33 35 +13 43 +35 37 +99 101 +16 23 +14 110 +4 58 +77 100 +62 94 +9 11 +3 59 +80 83 +53 60 +38 74 +33 36 +60 65 +97 103 +17 22 +26 32 +91 100 +40 46 +12 49 +56 58 +43 46 +3 114 +83 85 +22 24 +10 113 +56 59 +13 37 +12 51 +65 69 +88 90 +78 88 +49 67 +19 75 +79 81 +48 67 +5 7 +0 109 +92 95 +15 24 +92 96 +21 75 +31 36 +13 39 +57 59 +76 78 +103 107 +30 32 +13 41 +19 100 +65 67 +87 93 +37 74 +1 109 +111 113 +63 73 +4 6 +61 96 +15 25 +78 81 +84 87 +110 112 +80 82 +27 36 +104 107 +19 76 +41 45 +2 59 +15 19 +2 105 +46 48 +15 107 +101 103 +86 88 +15 109 +1 3 +52 60 +64 72 +104 106 +29 32 +73 79 +98 101 +68 70 +84 86 +91 97 +14 37 +42 44 +77 90 +47 68 +38 73 +4 59 +75 79 +16 19 +106 108 +12 52 +30 36 +110 114 +64 70 +11 110 +90 93 +60 63 diff --git a/data/candidates/chr9/115_106_graph.txt b/data/candidates/chr9/115_106_graph.txt new file mode 100644 index 0000000..1251c60 --- /dev/null +++ b/data/candidates/chr9/115_106_graph.txt @@ -0,0 +1,677 @@ +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 82 +82 83 +83 84 +84 85 +85 86 +86 87 +87 88 +88 89 +89 90 +90 91 +91 92 +92 93 +93 94 +94 95 +95 96 +96 97 +97 98 +98 99 +99 100 +100 101 +101 102 +102 103 +103 104 +104 105 +105 106 +106 107 +107 108 +108 109 +109 110 +110 111 +111 112 +112 113 +113 114 +114 0 +11 76 +4 91 +32 91 +39 63 +17 43 +20 106 +33 65 +1 105 +11 90 +11 81 +1 17 +84 90 +50 62 +23 38 +25 27 +63 68 +56 76 +51 56 +46 53 +28 33 +4 101 +47 52 +39 47 +81 86 +17 109 +36 38 +61 72 +61 74 +98 103 +75 87 +66 91 +25 97 +99 101 +0 106 +4 103 +92 100 +2 10 +82 84 +27 34 +93 100 +50 61 +12 54 +16 46 +2 12 +68 74 +59 74 +1 3 +81 87 +23 105 +1 114 +31 91 +22 42 +62 69 +16 53 +69 72 +38 41 +74 87 +29 92 +39 49 +106 112 +8 11 +37 63 +2 11 +4 7 +30 32 +12 17 +6 91 +24 105 +62 70 +92 94 +28 34 +14 53 +28 96 +28 94 +106 109 +48 50 +57 61 +91 100 +0 112 +39 46 +88 90 +17 20 +87 91 +25 98 +1 106 +6 8 +19 42 +98 105 +74 76 +4 9 +86 89 +41 44 +25 34 +49 63 +37 39 +20 105 +25 105 +11 79 +78 80 +6 11 +56 58 +23 34 +5 91 +98 104 +107 111 +17 46 +29 33 +12 15 +56 61 +47 50 +34 38 +81 83 +18 20 +25 96 +34 65 +64 66 +4 105 +63 65 +36 65 +58 74 +107 110 +12 14 +46 52 +26 28 +17 114 +87 90 +111 113 +19 21 +20 22 +93 96 +93 97 +30 91 +110 113 +83 85 +54 76 +68 91 +106 111 +14 16 +93 99 +22 38 +50 63 +9 11 +30 92 +4 8 +58 61 +51 54 +19 43 +4 100 +51 61 +26 96 +40 44 +64 67 +69 73 +78 81 +18 43 +38 40 +12 16 +17 44 +40 46 +94 96 +23 25 +79 81 +44 46 +108 110 +11 91 +11 54 +70 72 +77 79 +63 67 +85 90 +61 73 +66 68 +36 63 +62 72 +101 103 +2 17 +29 94 +2 9 +38 42 +99 102 +62 68 +32 65 +30 33 +81 84 +47 49 +35 38 +28 95 +76 81 +98 102 +76 79 +42 44 +19 22 +35 65 +97 99 +47 51 +2 4 +5 7 +69 71 +106 108 +60 74 +74 91 +81 85 +51 55 +17 106 +76 78 +86 88 +55 76 +58 76 +76 87 +17 45 +86 90 +12 53 +0 113 +81 90 +58 60 +51 53 +20 23 +17 110 +4 104 +110 114 +1 4 +65 91 +68 73 +13 15 +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 82 +82 83 +83 84 +84 85 +85 86 +86 87 +87 88 +88 89 +89 90 +90 91 +91 92 +92 93 +93 94 +94 95 +95 96 +96 97 +97 98 +98 99 +99 100 +100 101 +101 102 +102 103 +103 104 +104 105 +105 106 +106 107 +107 108 +108 109 +109 110 +110 111 +111 112 +112 113 +113 114 +114 0 +99 108 +56 72 +112 114 +13 53 +78 97 +47 91 +24 48 +0 57 +32 99 +29 32 +52 80 +52 72 +65 74 +78 96 +28 40 +19 49 +14 31 +10 108 +0 61 +38 46 +10 114 +3 6 +46 93 +99 104 +98 100 +60 63 +73 79 +86 94 +63 78 +11 55 +48 51 +15 52 +85 95 +21 48 +16 27 +17 51 +51 90 +4 6 +2 8 +23 27 +39 43 +105 112 +60 64 +29 39 +25 46 +105 114 +3 8 +78 95 +87 93 +28 43 +35 46 +18 22 +69 74 +84 88 +91 93 +51 84 +0 104 +8 57 +110 112 +11 32 +33 97 +3 9 +32 98 +71 74 +13 54 +75 79 +100 103 +97 103 +16 22 +79 84 +89 92 +10 57 +33 35 +29 38 +3 5 +58 64 +17 49 +62 78 +12 55 +109 112 +40 42 +87 92 +111 114 +33 36 +56 68 +40 43 +41 43 +2 6 +0 3 +10 55 +55 72 +46 94 +46 48 +16 23 +63 75 +57 64 +55 57 +56 70 +100 104 +63 76 +15 29 +0 78 +100 102 +107 109 +10 99 +57 67 +51 83 +17 22 +46 97 +21 23 +56 71 +32 36 +36 46 +75 77 +29 40 +20 48 +86 93 +0 105 +51 81 +19 48 +18 49 +25 43 +25 44 +0 62 +53 72 +0 59 +15 28 +15 27 +63 77 +16 51 +32 38 +10 109 +65 68 +13 52 +105 113 +99 106 +9 57 +14 30 +84 95 +0 8 +14 29 +0 97 +11 13 +68 70 +89 91 +13 32 +63 74 +43 46 +61 63 +11 99 +65 69 +46 95 +17 50 +102 104 +109 114 +65 67 +38 43 +28 42 +16 52 +75 78 +9 114 +70 74 +80 82 +13 31 +79 83 +109 111 +56 67 +13 55 +2 5 +52 81 +0 103 +72 79 +51 91 +59 64 +46 96 +57 59 +32 37 +18 21 +0 9 +72 74 +84 86 +54 72 +99 107 +107 112 +1 8 +33 98 +3 7 +85 94 +49 51 +51 88 +25 45 +34 97 +79 82 +74 79 +21 24 +57 65 +97 100 +23 26 +29 31 +43 45 +35 97 +37 46 +0 60 +2 7 +52 79 +101 104 +88 92 +47 93 +27 43 +104 106 +14 52 +51 89 +51 82 +48 91 +25 48 +24 26 +26 43 +64 74 +78 84 +105 107 +84 87 +57 66 +0 2 diff --git a/data/candidates/chr9/115_106_partitions.txt b/data/candidates/chr9/115_106_partitions.txt new file mode 100644 index 0000000..c379452 --- /dev/null +++ b/data/candidates/chr9/115_106_partitions.txt @@ -0,0 +1,678 @@ +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 82 +82 83 +83 84 +84 85 +85 86 +86 87 +87 88 +88 89 +89 90 +90 91 +91 92 +92 93 +93 94 +94 95 +95 96 +96 97 +97 98 +98 99 +99 100 +100 101 +101 102 +102 103 +103 104 +104 105 +105 106 +106 107 +107 108 +108 109 +109 110 +110 111 +111 112 +112 113 +113 114 +114 0 +11 76 +4 91 +32 91 +39 63 +17 43 +20 106 +33 65 +1 105 +11 90 +11 81 +1 17 +84 90 +50 62 +23 38 +25 27 +63 68 +56 76 +51 56 +46 53 +28 33 +4 101 +47 52 +39 47 +81 86 +17 109 +36 38 +61 72 +61 74 +98 103 +75 87 +66 91 +25 97 +99 101 +0 106 +4 103 +92 100 +2 10 +82 84 +27 34 +93 100 +50 61 +12 54 +16 46 +2 12 +68 74 +59 74 +1 3 +81 87 +23 105 +1 114 +31 91 +22 42 +62 69 +16 53 +69 72 +38 41 +74 87 +29 92 +39 49 +106 112 +8 11 +37 63 +2 11 +4 7 +30 32 +12 17 +6 91 +24 105 +62 70 +92 94 +28 34 +14 53 +28 96 +28 94 +106 109 +48 50 +57 61 +91 100 +0 112 +39 46 +88 90 +17 20 +87 91 +25 98 +1 106 +6 8 +19 42 +98 105 +74 76 +4 9 +86 89 +41 44 +25 34 +49 63 +37 39 +20 105 +25 105 +11 79 +78 80 +6 11 +56 58 +23 34 +5 91 +98 104 +107 111 +17 46 +29 33 +12 15 +56 61 +47 50 +34 38 +81 83 +18 20 +25 96 +34 65 +64 66 +4 105 +63 65 +36 65 +58 74 +107 110 +12 14 +46 52 +26 28 +17 114 +87 90 +111 113 +19 21 +20 22 +93 96 +93 97 +30 91 +110 113 +83 85 +54 76 +68 91 +106 111 +14 16 +93 99 +22 38 +50 63 +9 11 +30 92 +4 8 +58 61 +51 54 +19 43 +4 100 +51 61 +26 96 +40 44 +64 67 +69 73 +78 81 +18 43 +38 40 +12 16 +17 44 +40 46 +94 96 +23 25 +79 81 +44 46 +108 110 +11 91 +11 54 +70 72 +77 79 +63 67 +85 90 +61 73 +66 68 +36 63 +62 72 +101 103 +2 17 +29 94 +2 9 +38 42 +99 102 +62 68 +32 65 +30 33 +81 84 +47 49 +35 38 +28 95 +76 81 +98 102 +76 79 +42 44 +19 22 +35 65 +97 99 +47 51 +2 4 +5 7 +69 71 +106 108 +60 74 +74 91 +81 85 +51 55 +17 106 +76 78 +86 88 +55 76 +58 76 +76 87 +17 45 +86 90 +12 53 +0 113 +81 90 +58 60 +51 53 +20 23 +17 110 +4 104 +110 114 +1 4 +65 91 +68 73 +13 15 + +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 82 +82 83 +83 84 +84 85 +85 86 +86 87 +87 88 +88 89 +89 90 +90 91 +91 92 +92 93 +93 94 +94 95 +95 96 +96 97 +97 98 +98 99 +99 100 +100 101 +101 102 +102 103 +103 104 +104 105 +105 106 +106 107 +107 108 +108 109 +109 110 +110 111 +111 112 +112 113 +113 114 +114 0 +99 108 +56 72 +112 114 +13 53 +78 97 +47 91 +24 48 +0 57 +32 99 +29 32 +52 80 +52 72 +65 74 +78 96 +28 40 +19 49 +14 31 +10 108 +0 61 +38 46 +10 114 +3 6 +46 93 +99 104 +98 100 +60 63 +73 79 +86 94 +63 78 +11 55 +48 51 +15 52 +85 95 +21 48 +16 27 +17 51 +51 90 +4 6 +2 8 +23 27 +39 43 +105 112 +60 64 +29 39 +25 46 +105 114 +3 8 +78 95 +87 93 +28 43 +35 46 +18 22 +69 74 +84 88 +91 93 +51 84 +0 104 +8 57 +110 112 +11 32 +33 97 +3 9 +32 98 +71 74 +13 54 +75 79 +100 103 +97 103 +16 22 +79 84 +89 92 +10 57 +33 35 +29 38 +3 5 +58 64 +17 49 +62 78 +12 55 +109 112 +40 42 +87 92 +111 114 +33 36 +56 68 +40 43 +41 43 +2 6 +0 3 +10 55 +55 72 +46 94 +46 48 +16 23 +63 75 +57 64 +55 57 +56 70 +100 104 +63 76 +15 29 +0 78 +100 102 +107 109 +10 99 +57 67 +51 83 +17 22 +46 97 +21 23 +56 71 +32 36 +36 46 +75 77 +29 40 +20 48 +86 93 +0 105 +51 81 +19 48 +18 49 +25 43 +25 44 +0 62 +53 72 +0 59 +15 28 +15 27 +63 77 +16 51 +32 38 +10 109 +65 68 +13 52 +105 113 +99 106 +9 57 +14 30 +84 95 +0 8 +14 29 +0 97 +11 13 +68 70 +89 91 +13 32 +63 74 +43 46 +61 63 +11 99 +65 69 +46 95 +17 50 +102 104 +109 114 +65 67 +38 43 +28 42 +16 52 +75 78 +9 114 +70 74 +80 82 +13 31 +79 83 +109 111 +56 67 +13 55 +2 5 +52 81 +0 103 +72 79 +51 91 +59 64 +46 96 +57 59 +32 37 +18 21 +0 9 +72 74 +84 86 +54 72 +99 107 +107 112 +1 8 +33 98 +3 7 +85 94 +49 51 +51 88 +25 45 +34 97 +79 82 +74 79 +21 24 +57 65 +97 100 +23 26 +29 31 +43 45 +35 97 +37 46 +0 60 +2 7 +52 79 +101 104 +88 92 +47 93 +27 43 +104 106 +14 52 +51 89 +51 82 +48 91 +25 48 +24 26 +26 43 +64 74 +78 84 +105 107 +84 87 +57 66 +0 2 diff --git a/data/candidates/chr9/115_88_graph.txt b/data/candidates/chr9/115_88_graph.txt new file mode 100644 index 0000000..2693eb7 --- /dev/null +++ b/data/candidates/chr9/115_88_graph.txt @@ -0,0 +1,674 @@ +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 82 +82 83 +83 84 +84 85 +85 86 +86 87 +87 88 +88 89 +89 90 +90 91 +91 92 +92 93 +93 94 +94 95 +95 96 +96 97 +97 98 +98 99 +99 100 +100 101 +101 102 +102 103 +103 104 +104 105 +105 106 +106 107 +107 108 +108 109 +109 110 +110 111 +111 112 +112 113 +113 114 +114 0 +50 103 +45 53 +23 109 +84 107 +71 82 +13 84 +30 63 +9 22 +54 100 +49 108 +14 18 +41 46 +23 74 +60 94 +26 49 +20 74 +30 61 +26 33 +39 59 +25 27 +2 109 +73 76 +8 114 +71 73 +48 51 +60 88 +64 67 +92 99 +10 22 +26 46 +49 104 +23 111 +15 21 +58 100 +29 73 +33 46 +24 29 +0 6 +77 80 +66 71 +28 32 +45 48 +14 74 +7 84 +54 101 +84 86 +60 89 +69 73 +62 66 +36 61 +86 105 +38 41 +87 103 +33 41 +72 81 +73 75 +36 59 +31 33 +3 5 +7 9 +27 33 +1 109 +14 82 +30 33 +88 92 +66 82 +7 13 +36 38 +60 84 +53 101 +36 60 +44 57 +58 60 +96 98 +66 84 +3 6 +84 109 +88 103 +35 38 +57 59 +50 52 +22 114 +29 32 +60 98 +85 105 +63 73 +23 114 +85 107 +91 93 +96 99 +104 107 +38 40 +14 78 +9 13 +101 103 +37 39 +40 42 +40 59 +19 21 +2 5 +109 113 +86 88 +79 81 +64 69 +88 101 +12 21 +16 18 +15 18 +34 38 +58 99 +14 84 +52 102 +11 21 +27 32 +14 76 +109 114 +35 61 +30 62 +13 15 +87 105 +24 28 +93 95 +1 5 +40 43 +89 92 +58 98 +97 99 +66 70 +88 99 +23 73 +33 35 +8 22 +112 114 +49 103 +67 70 +57 100 +33 61 +17 19 +45 54 +23 112 +25 109 +60 66 +89 94 +49 107 +25 49 +54 57 +14 19 +3 7 +14 83 +65 67 +42 44 +77 81 +16 21 +45 52 +72 82 +103 105 +76 81 +10 12 +7 109 +109 112 +23 110 +30 73 +78 82 +21 74 +6 8 +44 56 +0 5 +52 103 +46 48 +0 8 +53 102 +45 51 +107 109 +4 6 +43 59 +79 82 +64 66 +78 80 +60 96 +93 96 +64 73 +89 93 +48 50 +44 59 +24 73 +21 23 +41 44 +89 91 +69 71 +13 21 +41 45 +2 7 +44 55 +25 108 +1 114 +109 111 +11 22 +104 106 +99 101 +93 99 +82 84 +61 66 +10 13 +46 49 +37 59 +73 81 +25 28 +60 86 +54 56 +64 68 +76 78 +62 64 +90 92 +29 31 +14 20 +34 41 +17 21 +47 49 +44 54 +60 95 +68 70 +105 107 +14 75 +23 25 +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 82 +82 83 +83 84 +84 85 +85 86 +86 87 +87 88 +88 89 +89 90 +90 91 +91 92 +92 93 +93 94 +94 95 +95 96 +96 97 +97 98 +98 99 +99 100 +100 101 +101 102 +102 103 +103 104 +104 105 +105 106 +106 107 +107 108 +108 109 +109 110 +110 111 +111 112 +112 113 +113 114 +114 0 +53 114 +17 84 +0 94 +47 53 +44 58 +24 71 +13 31 +63 114 +7 36 +70 92 +81 89 +87 92 +55 114 +48 52 +44 52 +27 68 +16 22 +41 52 +25 69 +80 89 +30 38 +7 38 +94 101 +102 111 +93 97 +8 10 +104 113 +63 92 +22 72 +92 97 +13 17 +87 93 +1 8 +92 104 +29 42 +17 77 +92 100 +10 86 +28 59 +13 27 +8 11 +8 13 +22 76 +23 71 +57 63 +28 61 +18 22 +39 114 +65 69 +81 83 +17 85 +45 49 +101 104 +34 36 +105 110 +5 114 +27 29 +46 55 +95 100 +79 92 +0 4 +85 87 +22 75 +78 92 +29 40 +53 55 +95 101 +13 36 +0 9 +16 19 +106 111 +102 104 +14 16 +57 60 +29 41 +18 77 +17 86 +42 59 +30 35 +111 114 +56 114 +0 3 +17 79 +1 4 +94 114 +16 24 +94 102 +71 77 +45 55 +61 67 +71 78 +16 23 +92 114 +110 112 +57 114 +31 34 +45 57 +108 111 +27 61 +45 50 +17 80 +31 35 +39 53 +0 2 +88 90 +55 57 +39 41 +102 114 +75 77 +16 25 +72 77 +72 75 +15 25 +7 39 +73 77 +83 89 +25 68 +31 36 +95 97 +64 70 +48 53 +71 92 +100 104 +42 52 +30 37 +30 36 +104 112 +80 82 +0 86 +4 8 +2 4 +12 86 +86 93 +5 8 +98 100 +86 94 +32 36 +105 109 +92 113 +27 30 +1 9 +77 79 +85 88 +64 92 +63 66 +66 69 +28 42 +79 89 +66 68 +59 61 +14 17 +95 98 +94 96 +32 34 +102 106 +84 89 +43 52 +5 39 +8 36 +60 63 +22 77 +12 17 +11 13 +46 53 +105 112 +61 63 +16 20 +25 70 +0 10 +14 25 +17 82 +45 58 +26 68 +13 26 +4 114 +65 70 +72 74 +17 83 +85 89 +42 58 +88 91 +106 108 +94 97 +5 7 +60 62 +29 39 +13 30 +61 68 +30 39 +23 72 +39 52 +54 114 +106 109 +103 106 +7 37 +49 51 +111 113 +107 111 +20 22 +79 90 +11 86 +33 36 +14 26 +45 47 +43 58 +74 77 +18 21 +63 67 +92 98 +95 99 +44 50 +24 70 +49 52 +18 20 +79 91 +6 39 +63 65 +44 51 +87 91 +108 110 diff --git a/data/candidates/chr9/115_88_partitions.txt b/data/candidates/chr9/115_88_partitions.txt new file mode 100644 index 0000000..29f83f9 --- /dev/null +++ b/data/candidates/chr9/115_88_partitions.txt @@ -0,0 +1,675 @@ +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 82 +82 83 +83 84 +84 85 +85 86 +86 87 +87 88 +88 89 +89 90 +90 91 +91 92 +92 93 +93 94 +94 95 +95 96 +96 97 +97 98 +98 99 +99 100 +100 101 +101 102 +102 103 +103 104 +104 105 +105 106 +106 107 +107 108 +108 109 +109 110 +110 111 +111 112 +112 113 +113 114 +114 0 +50 103 +45 53 +23 109 +84 107 +71 82 +13 84 +30 63 +9 22 +54 100 +49 108 +14 18 +41 46 +23 74 +60 94 +26 49 +20 74 +30 61 +26 33 +39 59 +25 27 +2 109 +73 76 +8 114 +71 73 +48 51 +60 88 +64 67 +92 99 +10 22 +26 46 +49 104 +23 111 +15 21 +58 100 +29 73 +33 46 +24 29 +0 6 +77 80 +66 71 +28 32 +45 48 +14 74 +7 84 +54 101 +84 86 +60 89 +69 73 +62 66 +36 61 +86 105 +38 41 +87 103 +33 41 +72 81 +73 75 +36 59 +31 33 +3 5 +7 9 +27 33 +1 109 +14 82 +30 33 +88 92 +66 82 +7 13 +36 38 +60 84 +53 101 +36 60 +44 57 +58 60 +96 98 +66 84 +3 6 +84 109 +88 103 +35 38 +57 59 +50 52 +22 114 +29 32 +60 98 +85 105 +63 73 +23 114 +85 107 +91 93 +96 99 +104 107 +38 40 +14 78 +9 13 +101 103 +37 39 +40 42 +40 59 +19 21 +2 5 +109 113 +86 88 +79 81 +64 69 +88 101 +12 21 +16 18 +15 18 +34 38 +58 99 +14 84 +52 102 +11 21 +27 32 +14 76 +109 114 +35 61 +30 62 +13 15 +87 105 +24 28 +93 95 +1 5 +40 43 +89 92 +58 98 +97 99 +66 70 +88 99 +23 73 +33 35 +8 22 +112 114 +49 103 +67 70 +57 100 +33 61 +17 19 +45 54 +23 112 +25 109 +60 66 +89 94 +49 107 +25 49 +54 57 +14 19 +3 7 +14 83 +65 67 +42 44 +77 81 +16 21 +45 52 +72 82 +103 105 +76 81 +10 12 +7 109 +109 112 +23 110 +30 73 +78 82 +21 74 +6 8 +44 56 +0 5 +52 103 +46 48 +0 8 +53 102 +45 51 +107 109 +4 6 +43 59 +79 82 +64 66 +78 80 +60 96 +93 96 +64 73 +89 93 +48 50 +44 59 +24 73 +21 23 +41 44 +89 91 +69 71 +13 21 +41 45 +2 7 +44 55 +25 108 +1 114 +109 111 +11 22 +104 106 +99 101 +93 99 +82 84 +61 66 +10 13 +46 49 +37 59 +73 81 +25 28 +60 86 +54 56 +64 68 +76 78 +62 64 +90 92 +29 31 +14 20 +34 41 +17 21 +47 49 +44 54 +60 95 +68 70 +105 107 +14 75 +23 25 + +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 82 +82 83 +83 84 +84 85 +85 86 +86 87 +87 88 +88 89 +89 90 +90 91 +91 92 +92 93 +93 94 +94 95 +95 96 +96 97 +97 98 +98 99 +99 100 +100 101 +101 102 +102 103 +103 104 +104 105 +105 106 +106 107 +107 108 +108 109 +109 110 +110 111 +111 112 +112 113 +113 114 +114 0 +53 114 +17 84 +0 94 +47 53 +44 58 +24 71 +13 31 +63 114 +7 36 +70 92 +81 89 +87 92 +55 114 +48 52 +44 52 +27 68 +16 22 +41 52 +25 69 +80 89 +30 38 +7 38 +94 101 +102 111 +93 97 +8 10 +104 113 +63 92 +22 72 +92 97 +13 17 +87 93 +1 8 +92 104 +29 42 +17 77 +92 100 +10 86 +28 59 +13 27 +8 11 +8 13 +22 76 +23 71 +57 63 +28 61 +18 22 +39 114 +65 69 +81 83 +17 85 +45 49 +101 104 +34 36 +105 110 +5 114 +27 29 +46 55 +95 100 +79 92 +0 4 +85 87 +22 75 +78 92 +29 40 +53 55 +95 101 +13 36 +0 9 +16 19 +106 111 +102 104 +14 16 +57 60 +29 41 +18 77 +17 86 +42 59 +30 35 +111 114 +56 114 +0 3 +17 79 +1 4 +94 114 +16 24 +94 102 +71 77 +45 55 +61 67 +71 78 +16 23 +92 114 +110 112 +57 114 +31 34 +45 57 +108 111 +27 61 +45 50 +17 80 +31 35 +39 53 +0 2 +88 90 +55 57 +39 41 +102 114 +75 77 +16 25 +72 77 +72 75 +15 25 +7 39 +73 77 +83 89 +25 68 +31 36 +95 97 +64 70 +48 53 +71 92 +100 104 +42 52 +30 37 +30 36 +104 112 +80 82 +0 86 +4 8 +2 4 +12 86 +86 93 +5 8 +98 100 +86 94 +32 36 +105 109 +92 113 +27 30 +1 9 +77 79 +85 88 +64 92 +63 66 +66 69 +28 42 +79 89 +66 68 +59 61 +14 17 +95 98 +94 96 +32 34 +102 106 +84 89 +43 52 +5 39 +8 36 +60 63 +22 77 +12 17 +11 13 +46 53 +105 112 +61 63 +16 20 +25 70 +0 10 +14 25 +17 82 +45 58 +26 68 +13 26 +4 114 +65 70 +72 74 +17 83 +85 89 +42 58 +88 91 +106 108 +94 97 +5 7 +60 62 +29 39 +13 30 +61 68 +30 39 +23 72 +39 52 +54 114 +106 109 +103 106 +7 37 +49 51 +111 113 +107 111 +20 22 +79 90 +11 86 +33 36 +14 26 +45 47 +43 58 +74 77 +18 21 +63 67 +92 98 +95 99 +44 50 +24 70 +49 52 +18 20 +79 91 +6 39 +63 65 +44 51 +87 91 +108 110 diff --git a/data/candidates/chr9/49_9_graph.txt b/data/candidates/chr9/49_9_graph.txt new file mode 100644 index 0000000..deb4e63 --- /dev/null +++ b/data/candidates/chr9/49_9_graph.txt @@ -0,0 +1,282 @@ +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 0 +10 47 +13 25 +8 26 +20 33 +39 47 +21 25 +0 45 +6 38 +3 41 +11 33 +7 29 +18 24 +42 45 +13 20 +29 34 +19 24 +6 47 +27 29 +4 38 +16 19 +5 48 +14 19 +28 30 +38 47 +26 32 +1 4 +10 36 +9 25 +41 45 +11 34 +6 37 +0 2 +39 46 +16 18 +11 25 +11 35 +9 47 +3 43 +17 24 +4 6 +39 45 +28 31 +10 35 +42 44 +3 38 +3 40 +26 28 +21 33 +26 29 +7 9 +11 20 +25 33 +7 36 +26 31 +8 25 +8 29 +36 38 +2 43 +0 44 +7 37 +23 25 +5 47 +21 24 +45 47 +16 25 +14 25 +15 19 +32 34 +10 38 +12 25 +6 9 +26 33 +0 47 +16 24 +9 11 +11 13 +40 45 +14 20 +2 44 +7 34 +1 3 +4 48 +1 48 +3 42 +31 34 +22 24 +38 40 +34 36 +22 25 +30 34 +15 25 +20 24 +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 0 +27 35 +23 42 +0 16 +0 43 +7 42 +10 27 +45 48 +30 41 +9 29 +8 42 +29 31 +18 23 +12 27 +16 23 +0 9 +44 46 +17 46 +16 48 +18 46 +29 41 +31 37 +25 42 +28 33 +16 22 +27 39 +0 6 +2 7 +30 39 +27 34 +11 27 +27 36 +5 7 +43 46 +26 40 +21 23 +16 20 +10 12 +14 24 +32 36 +27 40 +9 28 +29 33 +9 15 +23 43 +6 42 +4 7 +33 35 +10 15 +24 42 +1 7 +36 39 +16 21 +3 7 +3 6 +14 27 +14 26 +9 27 +30 37 +29 42 +27 33 +6 43 +20 23 +0 7 +24 26 +25 40 +2 6 +30 38 +32 35 +12 15 +31 33 +32 37 +40 42 +0 8 +17 19 +14 16 +1 6 +17 48 +9 42 +17 47 +9 16 +39 41 +12 14 +37 39 +14 23 +18 43 +19 23 +13 27 +3 5 +44 48 +46 48 +17 20 +43 48 diff --git a/data/candidates/chr9/49_9_partitions.txt b/data/candidates/chr9/49_9_partitions.txt new file mode 100644 index 0000000..c07fdbf --- /dev/null +++ b/data/candidates/chr9/49_9_partitions.txt @@ -0,0 +1,283 @@ +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 0 +10 47 +13 25 +8 26 +20 33 +39 47 +21 25 +0 45 +6 38 +3 41 +11 33 +7 29 +18 24 +42 45 +13 20 +29 34 +19 24 +6 47 +27 29 +4 38 +16 19 +5 48 +14 19 +28 30 +38 47 +26 32 +1 4 +10 36 +9 25 +41 45 +11 34 +6 37 +0 2 +39 46 +16 18 +11 25 +11 35 +9 47 +3 43 +17 24 +4 6 +39 45 +28 31 +10 35 +42 44 +3 38 +3 40 +26 28 +21 33 +26 29 +7 9 +11 20 +25 33 +7 36 +26 31 +8 25 +8 29 +36 38 +2 43 +0 44 +7 37 +23 25 +5 47 +21 24 +45 47 +16 25 +14 25 +15 19 +32 34 +10 38 +12 25 +6 9 +26 33 +0 47 +16 24 +9 11 +11 13 +40 45 +14 20 +2 44 +7 34 +1 3 +4 48 +1 48 +3 42 +31 34 +22 24 +38 40 +34 36 +22 25 +30 34 +15 25 +20 24 + +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 0 +27 35 +23 42 +0 16 +0 43 +7 42 +10 27 +45 48 +30 41 +9 29 +8 42 +29 31 +18 23 +12 27 +16 23 +0 9 +44 46 +17 46 +16 48 +18 46 +29 41 +31 37 +25 42 +28 33 +16 22 +27 39 +0 6 +2 7 +30 39 +27 34 +11 27 +27 36 +5 7 +43 46 +26 40 +21 23 +16 20 +10 12 +14 24 +32 36 +27 40 +9 28 +29 33 +9 15 +23 43 +6 42 +4 7 +33 35 +10 15 +24 42 +1 7 +36 39 +16 21 +3 7 +3 6 +14 27 +14 26 +9 27 +30 37 +29 42 +27 33 +6 43 +20 23 +0 7 +24 26 +25 40 +2 6 +30 38 +32 35 +12 15 +31 33 +32 37 +40 42 +0 8 +17 19 +14 16 +1 6 +17 48 +9 42 +17 47 +9 16 +39 41 +12 14 +37 39 +14 23 +18 43 +19 23 +13 27 +3 5 +44 48 +46 48 +17 20 +43 48 diff --git a/data/candidates/chr9/62_155_graph.txt b/data/candidates/chr9/62_155_graph.txt new file mode 100644 index 0000000..2746929 --- /dev/null +++ b/data/candidates/chr9/62_155_graph.txt @@ -0,0 +1,356 @@ +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 0 +28 60 +46 56 +35 58 +24 38 +1 23 +5 20 +2 40 +39 58 +43 56 +45 47 +5 10 +1 58 +26 29 +16 24 +49 57 +10 20 +52 56 +11 24 +1 56 +1 4 +30 35 +30 36 +49 55 +36 39 +29 59 +50 57 +31 58 +12 17 +1 61 +11 16 +20 23 +39 57 +3 10 +16 23 +43 48 +1 57 +18 22 +46 55 +41 57 +6 9 +3 5 +3 7 +27 61 +2 42 +24 26 +14 17 +2 10 +0 25 +41 43 +26 37 +12 15 +41 49 +19 21 +10 12 +28 59 +12 18 +43 45 +2 38 +24 37 +51 55 +46 49 +5 23 +4 23 +43 46 +29 36 +58 60 +6 10 +32 35 +0 26 +5 7 +38 40 +29 37 +58 61 +31 33 +51 57 +42 56 +2 24 +29 58 +46 48 +45 48 +27 60 +36 38 +10 24 +2 4 +32 34 +40 57 +13 17 +17 23 +15 17 +30 33 +3 9 +0 23 +12 16 +43 49 +13 15 +6 8 +53 55 +54 56 +49 51 +17 22 +44 48 +36 58 +18 20 +51 53 +7 9 +51 56 +26 61 +30 58 +18 21 +0 24 +53 56 +30 34 +1 42 +32 58 +40 42 +21 23 +27 29 +10 18 +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 0 +26 52 +14 25 +10 19 +34 61 +37 52 +50 55 +52 55 +10 21 +56 58 +24 61 +16 19 +52 61 +41 52 +8 61 +36 60 +3 13 +45 60 +33 35 +13 30 +0 32 +29 31 +41 46 +14 22 +30 32 +36 42 +16 22 +0 33 +35 52 +3 12 +36 45 +14 16 +15 22 +0 2 +4 11 +37 42 +1 6 +41 47 +25 61 +13 18 +55 59 +0 34 +5 9 +52 54 +0 30 +26 30 +29 52 +35 37 +50 54 +57 60 +55 61 +41 51 +9 21 +25 30 +49 59 +9 22 +51 54 +29 35 +47 50 +5 11 +11 13 +14 24 +57 59 +47 60 +55 60 +34 60 +38 52 +0 8 +29 33 +41 44 +27 30 +46 60 +38 41 +10 13 +22 61 +23 61 +47 51 +9 11 +39 41 +14 18 +26 28 +1 3 +36 44 +28 52 +47 49 +0 3 +1 5 +20 22 +38 42 +4 12 +0 6 +56 59 +56 60 +35 60 +9 61 +16 18 +49 60 +40 52 +44 46 +0 13 +22 24 +29 32 +13 19 +0 7 +25 52 +36 43 +39 52 +48 50 +19 22 +13 25 +42 44 +50 59 +17 19 +28 30 +5 8 diff --git a/data/candidates/chr9/62_155_partitions.txt b/data/candidates/chr9/62_155_partitions.txt new file mode 100644 index 0000000..124278f --- /dev/null +++ b/data/candidates/chr9/62_155_partitions.txt @@ -0,0 +1,357 @@ +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 0 +28 60 +46 56 +35 58 +24 38 +1 23 +5 20 +2 40 +39 58 +43 56 +45 47 +5 10 +1 58 +26 29 +16 24 +49 57 +10 20 +52 56 +11 24 +1 56 +1 4 +30 35 +30 36 +49 55 +36 39 +29 59 +50 57 +31 58 +12 17 +1 61 +11 16 +20 23 +39 57 +3 10 +16 23 +43 48 +1 57 +18 22 +46 55 +41 57 +6 9 +3 5 +3 7 +27 61 +2 42 +24 26 +14 17 +2 10 +0 25 +41 43 +26 37 +12 15 +41 49 +19 21 +10 12 +28 59 +12 18 +43 45 +2 38 +24 37 +51 55 +46 49 +5 23 +4 23 +43 46 +29 36 +58 60 +6 10 +32 35 +0 26 +5 7 +38 40 +29 37 +58 61 +31 33 +51 57 +42 56 +2 24 +29 58 +46 48 +45 48 +27 60 +36 38 +10 24 +2 4 +32 34 +40 57 +13 17 +17 23 +15 17 +30 33 +3 9 +0 23 +12 16 +43 49 +13 15 +6 8 +53 55 +54 56 +49 51 +17 22 +44 48 +36 58 +18 20 +51 53 +7 9 +51 56 +26 61 +30 58 +18 21 +0 24 +53 56 +30 34 +1 42 +32 58 +40 42 +21 23 +27 29 +10 18 + +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 0 +26 52 +14 25 +10 19 +34 61 +37 52 +50 55 +52 55 +10 21 +56 58 +24 61 +16 19 +52 61 +41 52 +8 61 +36 60 +3 13 +45 60 +33 35 +13 30 +0 32 +29 31 +41 46 +14 22 +30 32 +36 42 +16 22 +0 33 +35 52 +3 12 +36 45 +14 16 +15 22 +0 2 +4 11 +37 42 +1 6 +41 47 +25 61 +13 18 +55 59 +0 34 +5 9 +52 54 +0 30 +26 30 +29 52 +35 37 +50 54 +57 60 +55 61 +41 51 +9 21 +25 30 +49 59 +9 22 +51 54 +29 35 +47 50 +5 11 +11 13 +14 24 +57 59 +47 60 +55 60 +34 60 +38 52 +0 8 +29 33 +41 44 +27 30 +46 60 +38 41 +10 13 +22 61 +23 61 +47 51 +9 11 +39 41 +14 18 +26 28 +1 3 +36 44 +28 52 +47 49 +0 3 +1 5 +20 22 +38 42 +4 12 +0 6 +56 59 +56 60 +35 60 +9 61 +16 18 +49 60 +40 52 +44 46 +0 13 +22 24 +29 32 +13 19 +0 7 +25 52 +36 43 +39 52 +48 50 +19 22 +13 25 +42 44 +50 59 +17 19 +28 30 +5 8 diff --git a/data/candidates/chr9/65_143_graph.txt b/data/candidates/chr9/65_143_graph.txt new file mode 100644 index 0000000..9166a28 --- /dev/null +++ b/data/candidates/chr9/65_143_graph.txt @@ -0,0 +1,376 @@ +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 0 +53 63 +5 31 +14 37 +12 51 +4 8 +5 9 +33 51 +10 25 +10 16 +55 64 +23 32 +11 64 +20 23 +10 19 +0 10 +17 22 +0 31 +6 9 +35 46 +10 64 +32 53 +23 34 +19 24 +26 28 +34 36 +0 63 +40 51 +40 46 +1 3 +0 32 +9 31 +33 47 +55 62 +44 48 +44 51 +56 58 +42 51 +13 15 +27 31 +12 53 +44 47 +58 62 +8 10 +35 37 +3 5 +10 17 +22 34 +48 51 +12 16 +10 24 +26 32 +33 53 +49 51 +37 46 +1 4 +10 26 +12 14 +56 64 +55 63 +18 20 +25 32 +61 64 +14 40 +10 28 +15 34 +41 46 +14 34 +33 49 +43 46 +10 12 +24 32 +2 31 +57 64 +0 4 +53 55 +54 63 +14 39 +61 63 +60 62 +39 46 +4 6 +57 60 +53 64 +0 53 +9 30 +12 64 +43 45 +2 5 +55 58 +9 28 +9 29 +19 23 +0 8 +12 52 +28 31 +41 43 +27 32 +14 36 +18 22 +37 39 +33 48 +57 61 +12 15 +21 23 +33 35 +16 22 +17 19 +38 46 +0 2 +58 60 +18 21 +40 42 +6 8 +15 22 +4 7 +35 47 +59 62 +12 40 +51 53 +29 31 +44 46 +42 44 +33 50 +32 34 +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 0 +20 30 +0 52 +38 60 +3 51 +7 11 +23 25 +38 48 +5 23 +23 61 +12 36 +6 51 +38 52 +45 48 +39 45 +17 21 +7 14 +10 43 +18 34 +9 51 +37 60 +1 62 +36 40 +27 30 +23 28 +43 49 +44 49 +20 27 +6 14 +36 38 +6 17 +55 61 +32 61 +7 10 +36 42 +18 36 +31 34 +20 25 +13 18 +36 43 +38 56 +25 28 +17 20 +18 31 +54 56 +4 62 +35 61 +36 61 +22 25 +49 52 +53 61 +6 16 +45 47 +18 35 +1 64 +10 51 +10 49 +2 51 +14 18 +13 36 +7 12 +50 52 +12 43 +2 4 +38 49 +28 61 +15 18 +1 63 +0 61 +37 61 +6 15 +0 51 +55 60 +24 28 +4 61 +57 59 +2 62 +31 33 +30 61 +47 49 +20 26 +38 58 +38 40 +56 59 +54 61 +27 29 +39 48 +10 50 +41 44 +19 31 +19 30 +36 41 +4 51 +5 61 +8 51 +39 41 +46 49 +21 25 +34 61 +41 45 +53 56 +52 56 +15 17 +45 49 +7 51 +6 23 +38 57 +29 61 +6 22 +62 64 +56 60 +7 13 +0 62 +38 59 +7 9 +11 43 +6 21 +31 61 +25 27 +52 61 +1 51 +5 51 +33 61 diff --git a/data/candidates/chr9/65_143_partitions.txt b/data/candidates/chr9/65_143_partitions.txt new file mode 100644 index 0000000..11b02cc --- /dev/null +++ b/data/candidates/chr9/65_143_partitions.txt @@ -0,0 +1,377 @@ +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 0 +53 63 +5 31 +14 37 +12 51 +4 8 +5 9 +33 51 +10 25 +10 16 +55 64 +23 32 +11 64 +20 23 +10 19 +0 10 +17 22 +0 31 +6 9 +35 46 +10 64 +32 53 +23 34 +19 24 +26 28 +34 36 +0 63 +40 51 +40 46 +1 3 +0 32 +9 31 +33 47 +55 62 +44 48 +44 51 +56 58 +42 51 +13 15 +27 31 +12 53 +44 47 +58 62 +8 10 +35 37 +3 5 +10 17 +22 34 +48 51 +12 16 +10 24 +26 32 +33 53 +49 51 +37 46 +1 4 +10 26 +12 14 +56 64 +55 63 +18 20 +25 32 +61 64 +14 40 +10 28 +15 34 +41 46 +14 34 +33 49 +43 46 +10 12 +24 32 +2 31 +57 64 +0 4 +53 55 +54 63 +14 39 +61 63 +60 62 +39 46 +4 6 +57 60 +53 64 +0 53 +9 30 +12 64 +43 45 +2 5 +55 58 +9 28 +9 29 +19 23 +0 8 +12 52 +28 31 +41 43 +27 32 +14 36 +18 22 +37 39 +33 48 +57 61 +12 15 +21 23 +33 35 +16 22 +17 19 +38 46 +0 2 +58 60 +18 21 +40 42 +6 8 +15 22 +4 7 +35 47 +59 62 +12 40 +51 53 +29 31 +44 46 +42 44 +33 50 +32 34 + +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 0 +20 30 +0 52 +38 60 +3 51 +7 11 +23 25 +38 48 +5 23 +23 61 +12 36 +6 51 +38 52 +45 48 +39 45 +17 21 +7 14 +10 43 +18 34 +9 51 +37 60 +1 62 +36 40 +27 30 +23 28 +43 49 +44 49 +20 27 +6 14 +36 38 +6 17 +55 61 +32 61 +7 10 +36 42 +18 36 +31 34 +20 25 +13 18 +36 43 +38 56 +25 28 +17 20 +18 31 +54 56 +4 62 +35 61 +36 61 +22 25 +49 52 +53 61 +6 16 +45 47 +18 35 +1 64 +10 51 +10 49 +2 51 +14 18 +13 36 +7 12 +50 52 +12 43 +2 4 +38 49 +28 61 +15 18 +1 63 +0 61 +37 61 +6 15 +0 51 +55 60 +24 28 +4 61 +57 59 +2 62 +31 33 +30 61 +47 49 +20 26 +38 58 +38 40 +56 59 +54 61 +27 29 +39 48 +10 50 +41 44 +19 31 +19 30 +36 41 +4 51 +5 61 +8 51 +39 41 +46 49 +21 25 +34 61 +41 45 +53 56 +52 56 +15 17 +45 49 +7 51 +6 23 +38 57 +29 61 +6 22 +62 64 +56 60 +7 13 +0 62 +38 59 +7 9 +11 43 +6 21 +31 61 +25 27 +52 61 +1 51 +5 51 +33 61 diff --git a/data/candidates/chr9/66_230_graph.txt b/data/candidates/chr9/66_230_graph.txt new file mode 100644 index 0000000..deb4794 --- /dev/null +++ b/data/candidates/chr9/66_230_graph.txt @@ -0,0 +1,379 @@ +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 0 +37 42 +11 48 +13 47 +21 64 +4 8 +29 53 +16 23 +26 33 +50 60 +31 42 +56 63 +45 48 +0 20 +42 47 +2 6 +28 30 +13 17 +29 43 +26 53 +9 65 +34 37 +2 65 +7 9 +44 47 +10 63 +26 42 +32 35 +50 63 +2 8 +10 19 +57 61 +23 42 +48 51 +0 7 +57 62 +39 41 +22 55 +8 65 +6 8 +50 55 +59 61 +48 50 +50 61 +10 65 +33 40 +56 60 +26 55 +9 19 +26 28 +29 51 +10 12 +21 23 +15 47 +40 42 +26 54 +31 37 +33 39 +57 59 +58 60 +43 51 +0 2 +29 42 +43 45 +22 56 +32 37 +52 55 +17 19 +3 6 +61 63 +33 42 +5 8 +32 36 +37 39 +11 47 +37 41 +23 55 +2 4 +10 18 +0 64 +9 20 +50 52 +34 38 +13 18 +56 62 +24 55 +4 6 +28 32 +52 54 +56 64 +57 60 +43 47 +33 38 +19 21 +35 37 +23 25 +10 64 +49 63 +10 49 +23 26 +30 42 +2 7 +1 7 +44 46 +55 60 +14 16 +15 42 +51 53 +27 53 +22 64 +11 49 +12 18 +45 47 +0 21 +43 48 +17 23 +28 33 +28 31 +27 29 +16 42 +13 15 +14 17 +0 9 +25 55 +12 47 +33 35 +19 23 +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 0 +26 57 +7 44 +20 38 +26 49 +28 44 +5 12 +11 17 +1 52 +12 25 +28 42 +2 26 +1 49 +2 45 +28 49 +30 35 +0 55 +31 39 +10 44 +15 23 +17 20 +19 38 +54 56 +24 27 +60 65 +44 49 +36 39 +24 28 +49 54 +28 41 +11 18 +23 30 +29 40 +55 59 +6 45 +11 41 +26 59 +15 25 +1 59 +56 59 +23 35 +5 11 +1 26 +31 36 +1 53 +15 22 +16 20 +53 55 +11 19 +62 65 +2 25 +18 20 +41 43 +23 29 +55 63 +30 33 +2 12 +27 49 +21 38 +42 44 +1 45 +13 16 +55 65 +26 58 +1 46 +0 53 +12 17 +11 43 +31 33 +3 45 +30 32 +19 39 +62 64 +45 49 +35 38 +7 45 +49 52 +1 48 +54 57 +11 40 +31 35 +51 54 +63 65 +1 60 +13 25 +55 61 +14 25 +49 57 +28 40 +47 49 +60 62 +22 38 +1 47 +5 45 +55 62 +11 44 +9 44 +9 11 +30 34 +6 9 +22 35 +24 26 +30 39 +3 12 +5 9 +15 21 +1 65 +56 58 +12 16 +3 5 +11 39 +46 49 +36 38 +31 34 +8 44 +4 12 +30 40 +16 21 +24 29 +50 54 +49 51 +15 24 diff --git a/data/candidates/chr9/66_230_partitions.txt b/data/candidates/chr9/66_230_partitions.txt new file mode 100644 index 0000000..a262716 --- /dev/null +++ b/data/candidates/chr9/66_230_partitions.txt @@ -0,0 +1,380 @@ +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 0 +37 42 +11 48 +13 47 +21 64 +4 8 +29 53 +16 23 +26 33 +50 60 +31 42 +56 63 +45 48 +0 20 +42 47 +2 6 +28 30 +13 17 +29 43 +26 53 +9 65 +34 37 +2 65 +7 9 +44 47 +10 63 +26 42 +32 35 +50 63 +2 8 +10 19 +57 61 +23 42 +48 51 +0 7 +57 62 +39 41 +22 55 +8 65 +6 8 +50 55 +59 61 +48 50 +50 61 +10 65 +33 40 +56 60 +26 55 +9 19 +26 28 +29 51 +10 12 +21 23 +15 47 +40 42 +26 54 +31 37 +33 39 +57 59 +58 60 +43 51 +0 2 +29 42 +43 45 +22 56 +32 37 +52 55 +17 19 +3 6 +61 63 +33 42 +5 8 +32 36 +37 39 +11 47 +37 41 +23 55 +2 4 +10 18 +0 64 +9 20 +50 52 +34 38 +13 18 +56 62 +24 55 +4 6 +28 32 +52 54 +56 64 +57 60 +43 47 +33 38 +19 21 +35 37 +23 25 +10 64 +49 63 +10 49 +23 26 +30 42 +2 7 +1 7 +44 46 +55 60 +14 16 +15 42 +51 53 +27 53 +22 64 +11 49 +12 18 +45 47 +0 21 +43 48 +17 23 +28 33 +28 31 +27 29 +16 42 +13 15 +14 17 +0 9 +25 55 +12 47 +33 35 +19 23 + +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 0 +26 57 +7 44 +20 38 +26 49 +28 44 +5 12 +11 17 +1 52 +12 25 +28 42 +2 26 +1 49 +2 45 +28 49 +30 35 +0 55 +31 39 +10 44 +15 23 +17 20 +19 38 +54 56 +24 27 +60 65 +44 49 +36 39 +24 28 +49 54 +28 41 +11 18 +23 30 +29 40 +55 59 +6 45 +11 41 +26 59 +15 25 +1 59 +56 59 +23 35 +5 11 +1 26 +31 36 +1 53 +15 22 +16 20 +53 55 +11 19 +62 65 +2 25 +18 20 +41 43 +23 29 +55 63 +30 33 +2 12 +27 49 +21 38 +42 44 +1 45 +13 16 +55 65 +26 58 +1 46 +0 53 +12 17 +11 43 +31 33 +3 45 +30 32 +19 39 +62 64 +45 49 +35 38 +7 45 +49 52 +1 48 +54 57 +11 40 +31 35 +51 54 +63 65 +1 60 +13 25 +55 61 +14 25 +49 57 +28 40 +47 49 +60 62 +22 38 +1 47 +5 45 +55 62 +11 44 +9 44 +9 11 +30 34 +6 9 +22 35 +24 26 +30 39 +3 12 +5 9 +15 21 +1 65 +56 58 +12 16 +3 5 +11 39 +46 49 +36 38 +31 34 +8 44 +4 12 +30 40 +16 21 +24 29 +50 54 +49 51 +15 24 diff --git a/data/candidates/chr9/74_10_graph.txt b/data/candidates/chr9/74_10_graph.txt new file mode 100644 index 0000000..00f0364 --- /dev/null +++ b/data/candidates/chr9/74_10_graph.txt @@ -0,0 +1,428 @@ +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 0 +47 73 +37 69 +1 15 +45 51 +18 27 +21 72 +49 65 +53 55 +0 21 +5 39 +40 54 +26 71 +10 35 +11 13 +65 70 +16 20 +62 69 +3 46 +50 57 +34 71 +39 59 +44 51 +1 4 +7 12 +19 25 +54 56 +13 33 +64 67 +39 61 +16 32 +48 71 +24 71 +57 63 +47 51 +8 39 +9 39 +49 64 +42 44 +5 8 +30 34 +1 5 +12 14 +5 12 +52 57 +5 46 +36 71 +28 34 +65 71 +30 32 +37 61 +64 66 +37 39 +33 35 +1 16 +29 31 +47 71 +17 27 +17 29 +62 67 +21 25 +47 49 +50 52 +62 64 +67 69 +35 38 +65 68 +19 21 +22 24 +53 56 +44 52 +42 53 +21 24 +21 73 +66 68 +14 16 +54 57 +24 72 +27 71 +41 45 +41 44 +39 57 +37 70 +17 19 +5 14 +42 52 +8 11 +10 33 +3 47 +53 57 +40 46 +36 70 +9 35 +58 63 +5 40 +60 62 +48 65 +14 33 +1 21 +16 19 +45 47 +35 71 +57 64 +47 50 +57 59 +39 54 +30 33 +16 21 +2 4 +16 33 +47 72 +16 31 +10 13 +42 54 +22 72 +58 62 +9 38 +28 30 +6 12 +25 27 +8 10 +0 2 +58 60 +3 73 +1 14 +2 73 +6 8 +41 54 +43 52 +39 60 +17 31 +19 27 +40 45 +36 38 +65 69 +61 69 +4 46 +25 71 +50 64 +21 23 +27 34 +7 11 +27 29 +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 0 +6 62 +38 44 +12 44 +9 47 +5 41 +18 35 +42 58 +43 54 +17 20 +41 43 +19 24 +37 44 +42 57 +9 32 +13 35 +7 60 +10 47 +7 40 +4 61 +20 23 +30 35 +7 57 +3 61 +13 27 +43 55 +6 61 +7 36 +43 48 +11 45 +3 65 +10 29 +0 71 +23 27 +69 72 +17 35 +0 6 +12 36 +16 23 +43 47 +36 44 +27 30 +1 72 +23 26 +19 22 +55 57 +11 47 +38 43 +2 72 +12 29 +6 70 +50 54 +67 72 +62 65 +49 53 +70 72 +18 30 +12 35 +61 65 +38 40 +10 30 +68 70 +63 66 +49 51 +31 34 +24 30 +57 60 +7 61 +49 52 +48 50 +43 57 +9 33 +3 5 +44 46 +8 56 +9 56 +41 59 +9 53 +9 48 +23 25 +48 53 +31 35 +6 71 +9 36 +13 15 +9 54 +7 37 +10 12 +0 5 +59 61 +17 23 +65 67 +9 34 +10 32 +65 72 +39 41 +13 29 +15 23 +52 54 +16 35 +6 66 +44 47 +4 59 +8 57 +38 41 +0 3 +42 59 +18 24 +5 7 +12 45 +62 66 +7 9 +34 36 +43 50 +13 28 +15 35 +3 72 +15 27 +63 65 +1 3 +37 40 +11 46 +5 59 +26 30 +19 23 +1 73 +71 73 +14 27 +67 70 +10 31 +18 20 +68 72 +31 33 +9 55 +51 54 +6 67 +20 22 +7 41 +24 26 diff --git a/data/candidates/chr9/74_10_partitions.txt b/data/candidates/chr9/74_10_partitions.txt new file mode 100644 index 0000000..521bbf5 --- /dev/null +++ b/data/candidates/chr9/74_10_partitions.txt @@ -0,0 +1,429 @@ +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 0 +47 73 +37 69 +1 15 +45 51 +18 27 +21 72 +49 65 +53 55 +0 21 +5 39 +40 54 +26 71 +10 35 +11 13 +65 70 +16 20 +62 69 +3 46 +50 57 +34 71 +39 59 +44 51 +1 4 +7 12 +19 25 +54 56 +13 33 +64 67 +39 61 +16 32 +48 71 +24 71 +57 63 +47 51 +8 39 +9 39 +49 64 +42 44 +5 8 +30 34 +1 5 +12 14 +5 12 +52 57 +5 46 +36 71 +28 34 +65 71 +30 32 +37 61 +64 66 +37 39 +33 35 +1 16 +29 31 +47 71 +17 27 +17 29 +62 67 +21 25 +47 49 +50 52 +62 64 +67 69 +35 38 +65 68 +19 21 +22 24 +53 56 +44 52 +42 53 +21 24 +21 73 +66 68 +14 16 +54 57 +24 72 +27 71 +41 45 +41 44 +39 57 +37 70 +17 19 +5 14 +42 52 +8 11 +10 33 +3 47 +53 57 +40 46 +36 70 +9 35 +58 63 +5 40 +60 62 +48 65 +14 33 +1 21 +16 19 +45 47 +35 71 +57 64 +47 50 +57 59 +39 54 +30 33 +16 21 +2 4 +16 33 +47 72 +16 31 +10 13 +42 54 +22 72 +58 62 +9 38 +28 30 +6 12 +25 27 +8 10 +0 2 +58 60 +3 73 +1 14 +2 73 +6 8 +41 54 +43 52 +39 60 +17 31 +19 27 +40 45 +36 38 +65 69 +61 69 +4 46 +25 71 +50 64 +21 23 +27 34 +7 11 +27 29 + +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 0 +6 62 +38 44 +12 44 +9 47 +5 41 +18 35 +42 58 +43 54 +17 20 +41 43 +19 24 +37 44 +42 57 +9 32 +13 35 +7 60 +10 47 +7 40 +4 61 +20 23 +30 35 +7 57 +3 61 +13 27 +43 55 +6 61 +7 36 +43 48 +11 45 +3 65 +10 29 +0 71 +23 27 +69 72 +17 35 +0 6 +12 36 +16 23 +43 47 +36 44 +27 30 +1 72 +23 26 +19 22 +55 57 +11 47 +38 43 +2 72 +12 29 +6 70 +50 54 +67 72 +62 65 +49 53 +70 72 +18 30 +12 35 +61 65 +38 40 +10 30 +68 70 +63 66 +49 51 +31 34 +24 30 +57 60 +7 61 +49 52 +48 50 +43 57 +9 33 +3 5 +44 46 +8 56 +9 56 +41 59 +9 53 +9 48 +23 25 +48 53 +31 35 +6 71 +9 36 +13 15 +9 54 +7 37 +10 12 +0 5 +59 61 +17 23 +65 67 +9 34 +10 32 +65 72 +39 41 +13 29 +15 23 +52 54 +16 35 +6 66 +44 47 +4 59 +8 57 +38 41 +0 3 +42 59 +18 24 +5 7 +12 45 +62 66 +7 9 +34 36 +43 50 +13 28 +15 35 +3 72 +15 27 +63 65 +1 3 +37 40 +11 46 +5 59 +26 30 +19 23 +1 73 +71 73 +14 27 +67 70 +10 31 +18 20 +68 72 +31 33 +9 55 +51 54 +6 67 +20 22 +7 41 +24 26 diff --git a/data/candidates/chr9/76_32_graph.txt b/data/candidates/chr9/76_32_graph.txt new file mode 100644 index 0000000..657b48c --- /dev/null +++ b/data/candidates/chr9/76_32_graph.txt @@ -0,0 +1,443 @@ +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 0 +22 45 +34 47 +1 54 +17 49 +3 32 +61 66 +50 59 +5 70 +10 50 +46 49 +61 74 +14 20 +50 53 +56 60 +27 44 +69 71 +38 42 +3 74 +11 49 +33 44 +33 37 +23 45 +63 66 +26 28 +6 70 +2 49 +12 28 +62 66 +1 55 +38 46 +12 30 +62 68 +8 30 +3 73 +41 44 +33 49 +37 46 +39 45 +63 68 +50 67 +4 70 +64 67 +15 17 +18 45 +3 71 +60 74 +25 27 +55 75 +12 29 +28 44 +51 58 +16 20 +58 60 +52 57 +6 30 +18 46 +29 44 +33 43 +9 11 +0 74 +2 32 +62 71 +60 66 +7 67 +13 24 +29 32 +32 49 +4 30 +60 67 +53 57 +39 44 +0 55 +13 23 +24 28 +7 70 +7 10 +25 45 +30 32 +12 49 +35 37 +14 16 +50 58 +14 21 +13 21 +2 53 +40 42 +19 21 +13 22 +29 31 +37 47 +37 43 +56 58 +41 43 +51 57 +62 74 +49 53 +55 57 +64 68 +3 70 +12 14 +67 70 +4 32 +0 3 +9 30 +33 48 +56 74 +34 36 +38 45 +46 48 +19 45 +29 33 +16 19 +37 42 +2 54 +17 46 +62 73 +9 12 +39 41 +55 74 +63 65 +12 24 +68 70 +39 42 +33 36 +17 19 +64 66 +62 69 +1 3 +23 25 +12 15 +53 55 +11 50 +7 9 +12 17 +3 72 +7 50 +25 44 +71 73 +59 67 +50 52 +35 47 +6 8 +33 47 +21 45 +5 30 +25 28 +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 0 +6 45 +4 34 +47 62 +5 25 +1 50 +17 41 +24 41 +31 35 +46 74 +16 21 +24 38 +39 74 +56 61 +50 56 +16 18 +1 72 +64 71 +61 69 +1 70 +8 11 +1 61 +1 36 +7 44 +55 60 +3 46 +9 44 +1 52 +2 50 +61 65 +38 41 +14 42 +24 29 +7 14 +55 61 +7 24 +41 74 +1 35 +17 23 +72 75 +8 13 +54 61 +14 43 +7 45 +2 47 +11 13 +28 34 +28 31 +47 71 +58 61 +48 50 +7 22 +3 47 +10 13 +8 12 +51 54 +1 38 +45 74 +3 5 +13 44 +70 72 +65 71 +3 45 +47 63 +47 64 +18 20 +4 25 +52 54 +26 34 +24 37 +61 67 +1 69 +0 72 +24 36 +18 23 +67 71 +43 74 +57 61 +19 23 +16 42 +16 22 +13 43 +47 74 +48 62 +15 42 +22 24 +29 35 +7 15 +3 6 +18 21 +7 16 +49 62 +66 71 +29 36 +1 53 +62 65 +0 39 +30 35 +56 59 +39 75 +73 75 +32 34 +8 10 +2 48 +40 74 +71 74 +50 61 +61 68 +21 23 +4 26 +5 7 +23 41 +2 34 +16 41 +7 13 +31 33 +27 34 +50 54 +32 35 +24 27 +9 13 +2 4 +38 40 +72 74 +36 38 +28 33 +7 25 +27 29 +67 69 +54 56 +2 35 +24 26 +42 74 +62 64 +28 30 +49 61 +55 59 +1 39 +65 67 +59 61 +8 44 +20 23 +44 74 +1 51 +53 61 +57 59 diff --git a/data/candidates/chr9/76_32_partitions.txt b/data/candidates/chr9/76_32_partitions.txt new file mode 100644 index 0000000..f8c8bef --- /dev/null +++ b/data/candidates/chr9/76_32_partitions.txt @@ -0,0 +1,444 @@ +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 0 +22 45 +34 47 +1 54 +17 49 +3 32 +61 66 +50 59 +5 70 +10 50 +46 49 +61 74 +14 20 +50 53 +56 60 +27 44 +69 71 +38 42 +3 74 +11 49 +33 44 +33 37 +23 45 +63 66 +26 28 +6 70 +2 49 +12 28 +62 66 +1 55 +38 46 +12 30 +62 68 +8 30 +3 73 +41 44 +33 49 +37 46 +39 45 +63 68 +50 67 +4 70 +64 67 +15 17 +18 45 +3 71 +60 74 +25 27 +55 75 +12 29 +28 44 +51 58 +16 20 +58 60 +52 57 +6 30 +18 46 +29 44 +33 43 +9 11 +0 74 +2 32 +62 71 +60 66 +7 67 +13 24 +29 32 +32 49 +4 30 +60 67 +53 57 +39 44 +0 55 +13 23 +24 28 +7 70 +7 10 +25 45 +30 32 +12 49 +35 37 +14 16 +50 58 +14 21 +13 21 +2 53 +40 42 +19 21 +13 22 +29 31 +37 47 +37 43 +56 58 +41 43 +51 57 +62 74 +49 53 +55 57 +64 68 +3 70 +12 14 +67 70 +4 32 +0 3 +9 30 +33 48 +56 74 +34 36 +38 45 +46 48 +19 45 +29 33 +16 19 +37 42 +2 54 +17 46 +62 73 +9 12 +39 41 +55 74 +63 65 +12 24 +68 70 +39 42 +33 36 +17 19 +64 66 +62 69 +1 3 +23 25 +12 15 +53 55 +11 50 +7 9 +12 17 +3 72 +7 50 +25 44 +71 73 +59 67 +50 52 +35 47 +6 8 +33 47 +21 45 +5 30 +25 28 + +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 0 +6 45 +4 34 +47 62 +5 25 +1 50 +17 41 +24 41 +31 35 +46 74 +16 21 +24 38 +39 74 +56 61 +50 56 +16 18 +1 72 +64 71 +61 69 +1 70 +8 11 +1 61 +1 36 +7 44 +55 60 +3 46 +9 44 +1 52 +2 50 +61 65 +38 41 +14 42 +24 29 +7 14 +55 61 +7 24 +41 74 +1 35 +17 23 +72 75 +8 13 +54 61 +14 43 +7 45 +2 47 +11 13 +28 34 +28 31 +47 71 +58 61 +48 50 +7 22 +3 47 +10 13 +8 12 +51 54 +1 38 +45 74 +3 5 +13 44 +70 72 +65 71 +3 45 +47 63 +47 64 +18 20 +4 25 +52 54 +26 34 +24 37 +61 67 +1 69 +0 72 +24 36 +18 23 +67 71 +43 74 +57 61 +19 23 +16 42 +16 22 +13 43 +47 74 +48 62 +15 42 +22 24 +29 35 +7 15 +3 6 +18 21 +7 16 +49 62 +66 71 +29 36 +1 53 +62 65 +0 39 +30 35 +56 59 +39 75 +73 75 +32 34 +8 10 +2 48 +40 74 +71 74 +50 61 +61 68 +21 23 +4 26 +5 7 +23 41 +2 34 +16 41 +7 13 +31 33 +27 34 +50 54 +32 35 +24 27 +9 13 +2 4 +38 40 +72 74 +36 38 +28 33 +7 25 +27 29 +67 69 +54 56 +2 35 +24 26 +42 74 +62 64 +28 30 +49 61 +55 59 +1 39 +65 67 +59 61 +8 44 +20 23 +44 74 +1 51 +53 61 +57 59 diff --git a/data/candidates/chr9/78_58_graph.txt b/data/candidates/chr9/78_58_graph.txt new file mode 100644 index 0000000..0edbf53 --- /dev/null +++ b/data/candidates/chr9/78_58_graph.txt @@ -0,0 +1,454 @@ +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 0 +70 72 +25 70 +23 77 +27 77 +28 53 +47 75 +5 75 +67 71 +28 62 +0 14 +65 70 +62 64 +12 21 +40 50 +42 48 +55 75 +2 76 +65 68 +56 59 +39 77 +29 39 +44 76 +12 23 +12 25 +55 65 +15 20 +55 73 +29 38 +26 63 +7 9 +40 49 +23 27 +37 52 +28 55 +28 52 +4 13 +41 48 +39 41 +4 10 +17 19 +63 70 +65 71 +29 35 +13 17 +49 75 +27 62 +56 58 +18 20 +50 55 +30 36 +39 43 +11 74 +3 75 +10 12 +40 51 +3 5 +11 75 +32 36 +0 3 +25 63 +17 21 +3 14 +2 75 +39 42 +50 52 +8 11 +36 52 +43 47 +15 23 +6 9 +44 75 +48 75 +14 23 +66 71 +28 59 +12 73 +35 52 +31 36 +57 64 +2 77 +29 32 +55 57 +30 38 +44 47 +44 77 +57 62 +50 75 +10 13 +5 10 +39 51 +52 55 +67 70 +59 61 +12 24 +28 60 +58 61 +7 11 +17 20 +27 29 +15 19 +29 52 +33 36 +26 62 +43 77 +21 23 +43 48 +12 17 +1 3 +23 25 +32 34 +12 72 +28 61 +46 75 +57 65 +8 10 +12 74 +57 61 +29 34 +3 13 +15 21 +65 73 +6 75 +55 74 +64 70 +0 23 +65 69 +68 70 +65 72 +53 55 +29 31 +45 47 +6 11 +30 37 +52 54 +1 77 +27 39 +37 51 +23 26 +34 36 +15 17 +13 16 +13 15 +25 72 +15 22 +38 51 +55 59 +6 10 +41 49 +65 67 +44 46 +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 0 +15 70 +13 29 +28 51 +48 53 +0 43 +52 57 +52 58 +22 28 +3 9 +21 26 +15 63 +33 49 +31 43 +46 56 +61 70 +7 71 +21 61 +32 51 +29 43 +0 59 +45 49 +72 74 +21 29 +37 41 +14 20 +17 63 +34 44 +31 51 +21 63 +9 29 +51 58 +22 58 +14 70 +33 50 +61 63 +33 44 +38 40 +48 51 +31 33 +8 13 +16 63 +70 73 +3 74 +7 13 +24 27 +8 12 +39 44 +28 31 +25 27 +66 69 +61 65 +64 66 +71 74 +46 59 +15 64 +3 43 +0 46 +47 53 +38 44 +48 52 +16 20 +46 55 +22 26 +7 14 +16 18 +11 29 +0 2 +34 42 +42 44 +37 42 +14 21 +3 77 +3 6 +0 44 +60 77 +15 69 +1 43 +12 29 +15 66 +22 60 +75 77 +73 77 +63 65 +28 58 +60 73 +14 16 +40 44 +22 59 +15 68 +18 21 +40 42 +4 6 +21 60 +36 38 +24 26 +21 28 +4 7 +22 27 +14 29 +47 49 +4 74 +54 56 +46 58 +73 75 +46 57 +67 69 +0 45 +35 42 +44 49 +22 24 +47 55 +3 8 +46 49 +33 43 +62 65 +0 60 +61 66 +36 42 +74 77 +54 57 +32 50 +38 41 +9 43 +48 50 +18 63 +4 71 +21 27 +19 21 +53 57 +61 69 +74 76 +47 54 +7 70 +34 43 +15 67 +35 44 +3 7 +36 44 +61 73 +30 43 +9 12 +28 30 +71 73 +9 11 +16 19 +2 43 +10 29 +5 7 diff --git a/data/candidates/chr9/78_58_partitions.txt b/data/candidates/chr9/78_58_partitions.txt new file mode 100644 index 0000000..534eaeb --- /dev/null +++ b/data/candidates/chr9/78_58_partitions.txt @@ -0,0 +1,455 @@ +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 0 +70 72 +25 70 +23 77 +27 77 +28 53 +47 75 +5 75 +67 71 +28 62 +0 14 +65 70 +62 64 +12 21 +40 50 +42 48 +55 75 +2 76 +65 68 +56 59 +39 77 +29 39 +44 76 +12 23 +12 25 +55 65 +15 20 +55 73 +29 38 +26 63 +7 9 +40 49 +23 27 +37 52 +28 55 +28 52 +4 13 +41 48 +39 41 +4 10 +17 19 +63 70 +65 71 +29 35 +13 17 +49 75 +27 62 +56 58 +18 20 +50 55 +30 36 +39 43 +11 74 +3 75 +10 12 +40 51 +3 5 +11 75 +32 36 +0 3 +25 63 +17 21 +3 14 +2 75 +39 42 +50 52 +8 11 +36 52 +43 47 +15 23 +6 9 +44 75 +48 75 +14 23 +66 71 +28 59 +12 73 +35 52 +31 36 +57 64 +2 77 +29 32 +55 57 +30 38 +44 47 +44 77 +57 62 +50 75 +10 13 +5 10 +39 51 +52 55 +67 70 +59 61 +12 24 +28 60 +58 61 +7 11 +17 20 +27 29 +15 19 +29 52 +33 36 +26 62 +43 77 +21 23 +43 48 +12 17 +1 3 +23 25 +32 34 +12 72 +28 61 +46 75 +57 65 +8 10 +12 74 +57 61 +29 34 +3 13 +15 21 +65 73 +6 75 +55 74 +64 70 +0 23 +65 69 +68 70 +65 72 +53 55 +29 31 +45 47 +6 11 +30 37 +52 54 +1 77 +27 39 +37 51 +23 26 +34 36 +15 17 +13 16 +13 15 +25 72 +15 22 +38 51 +55 59 +6 10 +41 49 +65 67 +44 46 + +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 0 +15 70 +13 29 +28 51 +48 53 +0 43 +52 57 +52 58 +22 28 +3 9 +21 26 +15 63 +33 49 +31 43 +46 56 +61 70 +7 71 +21 61 +32 51 +29 43 +0 59 +45 49 +72 74 +21 29 +37 41 +14 20 +17 63 +34 44 +31 51 +21 63 +9 29 +51 58 +22 58 +14 70 +33 50 +61 63 +33 44 +38 40 +48 51 +31 33 +8 13 +16 63 +70 73 +3 74 +7 13 +24 27 +8 12 +39 44 +28 31 +25 27 +66 69 +61 65 +64 66 +71 74 +46 59 +15 64 +3 43 +0 46 +47 53 +38 44 +48 52 +16 20 +46 55 +22 26 +7 14 +16 18 +11 29 +0 2 +34 42 +42 44 +37 42 +14 21 +3 77 +3 6 +0 44 +60 77 +15 69 +1 43 +12 29 +15 66 +22 60 +75 77 +73 77 +63 65 +28 58 +60 73 +14 16 +40 44 +22 59 +15 68 +18 21 +40 42 +4 6 +21 60 +36 38 +24 26 +21 28 +4 7 +22 27 +14 29 +47 49 +4 74 +54 56 +46 58 +73 75 +46 57 +67 69 +0 45 +35 42 +44 49 +22 24 +47 55 +3 8 +46 49 +33 43 +62 65 +0 60 +61 66 +36 42 +74 77 +54 57 +32 50 +38 41 +9 43 +48 50 +18 63 +4 71 +21 27 +19 21 +53 57 +61 69 +74 76 +47 54 +7 70 +34 43 +15 67 +35 44 +3 7 +36 44 +61 73 +30 43 +9 12 +28 30 +71 73 +9 11 +16 19 +2 43 +10 29 +5 7 diff --git a/data/candidates/chr9/80_200_graph.txt b/data/candidates/chr9/80_200_graph.txt new file mode 100644 index 0000000..a798798 --- /dev/null +++ b/data/candidates/chr9/80_200_graph.txt @@ -0,0 +1,466 @@ +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 0 +7 41 +43 50 +29 74 +33 60 +46 77 +26 76 +11 37 +33 53 +35 50 +12 33 +58 63 +3 9 +33 70 +7 9 +69 74 +35 40 +58 69 +21 31 +16 78 +17 77 +9 11 +54 59 +11 14 +9 79 +41 44 +53 76 +3 44 +0 44 +1 3 +61 63 +64 70 +70 74 +7 40 +51 53 +58 67 +17 32 +4 41 +50 53 +13 32 +44 78 +23 76 +20 23 +44 46 +58 65 +12 37 +56 75 +35 39 +0 3 +27 30 +24 26 +48 52 +64 69 +65 68 +17 78 +30 70 +45 47 +2 79 +24 31 +9 14 +19 23 +56 59 +14 78 +40 43 +28 74 +69 71 +58 61 +47 53 +47 77 +63 70 +44 77 +19 21 +22 31 +14 17 +66 68 +21 32 +19 32 +57 69 +8 37 +53 55 +35 53 +5 9 +35 38 +58 64 +25 27 +49 51 +58 68 +55 76 +54 56 +58 60 +21 23 +27 29 +65 67 +38 40 +37 40 +60 62 +26 75 +47 50 +31 70 +33 37 +64 68 +48 51 +44 47 +27 31 +19 76 +54 60 +56 58 +44 79 +22 24 +28 75 +8 11 +1 79 +43 47 +60 63 +25 31 +10 14 +27 75 +33 35 +31 33 +47 49 +4 9 +12 14 +30 74 +36 38 +19 77 +33 54 +4 6 +71 73 +2 9 +14 79 +13 17 +24 76 +8 40 +40 42 +34 36 +14 16 +56 76 +69 72 +6 41 +15 17 +72 74 +56 74 +40 50 +12 32 +48 53 +3 41 +57 74 +33 36 +60 70 +71 74 +47 76 +6 9 +17 19 +41 43 +18 32 +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 0 +47 56 +9 40 +36 66 +55 79 +26 37 +55 58 +8 25 +40 44 +46 60 +28 78 +19 39 +9 47 +8 53 +63 79 +4 79 +5 78 +16 22 +67 79 +36 61 +17 40 +55 60 +8 13 +76 78 +47 57 +68 76 +44 61 +26 34 +36 73 +25 38 +15 24 +36 78 +5 53 +29 32 +10 12 +64 79 +34 78 +5 26 +28 31 +67 71 +23 25 +64 67 +11 13 +21 39 +6 8 +38 44 +3 55 +26 36 +50 55 +0 55 +8 49 +13 25 +74 77 +12 40 +17 21 +68 79 +36 77 +51 55 +71 75 +43 45 +75 77 +12 17 +21 25 +52 54 +16 24 +55 61 +27 34 +48 55 +8 51 +73 77 +9 13 +20 39 +27 33 +5 54 +47 60 +8 48 +6 25 +62 65 +64 66 +71 76 +26 28 +28 32 +26 78 +9 12 +3 54 +35 78 +67 70 +36 71 +57 59 +44 60 +6 26 +8 47 +68 71 +37 61 +4 54 +55 59 +17 20 +19 40 +31 34 +21 38 +42 46 +9 42 +5 7 +62 66 +63 65 +3 79 +30 32 +37 44 +47 55 +22 25 +25 37 +9 46 +4 78 +36 67 +67 69 +36 62 +45 60 +31 78 +16 21 +13 15 +51 54 +8 50 +16 23 +18 40 +1 55 +29 31 +72 75 +42 45 +55 62 +47 59 +26 35 +18 20 +42 44 +27 32 +14 25 +36 72 +73 75 +68 70 +2 55 +14 24 +55 57 +76 79 +0 2 +8 52 +10 13 +9 41 +7 53 +39 44 +12 15 +48 50 +62 79 +32 34 +12 16 diff --git a/data/candidates/chr9/80_200_partitions.txt b/data/candidates/chr9/80_200_partitions.txt new file mode 100644 index 0000000..c8c45e5 --- /dev/null +++ b/data/candidates/chr9/80_200_partitions.txt @@ -0,0 +1,467 @@ +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 0 +7 41 +43 50 +29 74 +33 60 +46 77 +26 76 +11 37 +33 53 +35 50 +12 33 +58 63 +3 9 +33 70 +7 9 +69 74 +35 40 +58 69 +21 31 +16 78 +17 77 +9 11 +54 59 +11 14 +9 79 +41 44 +53 76 +3 44 +0 44 +1 3 +61 63 +64 70 +70 74 +7 40 +51 53 +58 67 +17 32 +4 41 +50 53 +13 32 +44 78 +23 76 +20 23 +44 46 +58 65 +12 37 +56 75 +35 39 +0 3 +27 30 +24 26 +48 52 +64 69 +65 68 +17 78 +30 70 +45 47 +2 79 +24 31 +9 14 +19 23 +56 59 +14 78 +40 43 +28 74 +69 71 +58 61 +47 53 +47 77 +63 70 +44 77 +19 21 +22 31 +14 17 +66 68 +21 32 +19 32 +57 69 +8 37 +53 55 +35 53 +5 9 +35 38 +58 64 +25 27 +49 51 +58 68 +55 76 +54 56 +58 60 +21 23 +27 29 +65 67 +38 40 +37 40 +60 62 +26 75 +47 50 +31 70 +33 37 +64 68 +48 51 +44 47 +27 31 +19 76 +54 60 +56 58 +44 79 +22 24 +28 75 +8 11 +1 79 +43 47 +60 63 +25 31 +10 14 +27 75 +33 35 +31 33 +47 49 +4 9 +12 14 +30 74 +36 38 +19 77 +33 54 +4 6 +71 73 +2 9 +14 79 +13 17 +24 76 +8 40 +40 42 +34 36 +14 16 +56 76 +69 72 +6 41 +15 17 +72 74 +56 74 +40 50 +12 32 +48 53 +3 41 +57 74 +33 36 +60 70 +71 74 +47 76 +6 9 +17 19 +41 43 +18 32 + +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 0 +47 56 +9 40 +36 66 +55 79 +26 37 +55 58 +8 25 +40 44 +46 60 +28 78 +19 39 +9 47 +8 53 +63 79 +4 79 +5 78 +16 22 +67 79 +36 61 +17 40 +55 60 +8 13 +76 78 +47 57 +68 76 +44 61 +26 34 +36 73 +25 38 +15 24 +36 78 +5 53 +29 32 +10 12 +64 79 +34 78 +5 26 +28 31 +67 71 +23 25 +64 67 +11 13 +21 39 +6 8 +38 44 +3 55 +26 36 +50 55 +0 55 +8 49 +13 25 +74 77 +12 40 +17 21 +68 79 +36 77 +51 55 +71 75 +43 45 +75 77 +12 17 +21 25 +52 54 +16 24 +55 61 +27 34 +48 55 +8 51 +73 77 +9 13 +20 39 +27 33 +5 54 +47 60 +8 48 +6 25 +62 65 +64 66 +71 76 +26 28 +28 32 +26 78 +9 12 +3 54 +35 78 +67 70 +36 71 +57 59 +44 60 +6 26 +8 47 +68 71 +37 61 +4 54 +55 59 +17 20 +19 40 +31 34 +21 38 +42 46 +9 42 +5 7 +62 66 +63 65 +3 79 +30 32 +37 44 +47 55 +22 25 +25 37 +9 46 +4 78 +36 67 +67 69 +36 62 +45 60 +31 78 +16 21 +13 15 +51 54 +8 50 +16 23 +18 40 +1 55 +29 31 +72 75 +42 45 +55 62 +47 59 +26 35 +18 20 +42 44 +27 32 +14 25 +36 72 +73 75 +68 70 +2 55 +14 24 +55 57 +76 79 +0 2 +8 52 +10 13 +9 41 +7 53 +39 44 +12 15 +48 50 +62 79 +32 34 +12 16 diff --git a/data/candidates/chr9/82_84_graph.txt b/data/candidates/chr9/82_84_graph.txt new file mode 100644 index 0000000..9dc9341 --- /dev/null +++ b/data/candidates/chr9/82_84_graph.txt @@ -0,0 +1,478 @@ +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 0 +31 55 +1 52 +54 65 +14 36 +2 81 +61 71 +13 29 +14 17 +12 41 +13 36 +30 59 +32 39 +29 81 +71 75 +44 55 +58 61 +14 16 +53 72 +64 68 +7 46 +74 76 +30 34 +9 11 +0 52 +59 71 +6 50 +29 35 +36 38 +46 53 +7 50 +2 50 +16 26 +7 13 +72 75 +18 20 +13 24 +41 55 +10 41 +37 39 +8 45 +34 38 +46 54 +54 70 +1 81 +56 63 +30 33 +46 49 +25 27 +13 41 +10 43 +26 36 +18 21 +55 59 +57 59 +30 35 +4 29 +34 39 +13 40 +2 4 +29 77 +30 55 +16 24 +8 43 +61 63 +3 81 +44 54 +56 61 +20 24 +24 28 +76 81 +61 68 +8 13 +7 47 +16 23 +29 79 +9 12 +8 10 +13 17 +5 50 +16 21 +0 76 +30 71 +29 75 +35 38 +75 77 +24 29 +77 80 +53 74 +64 67 +77 81 +40 55 +2 52 +57 61 +16 22 +15 26 +42 55 +20 22 +32 55 +77 79 +10 42 +32 34 +7 29 +7 48 +52 76 +13 18 +36 39 +4 7 +63 65 +54 68 +61 64 +55 65 +66 68 +51 53 +58 60 +28 35 +5 7 +7 49 +20 23 +56 62 +25 28 +9 13 +53 76 +19 21 +30 75 +13 20 +43 55 +56 65 +50 52 +46 50 +47 49 +30 32 +32 40 +8 46 +16 18 +10 12 +65 68 +26 35 +68 70 +65 67 +60 71 +26 28 +53 71 +54 71 +16 25 +61 69 +55 57 +13 39 +72 74 +4 81 +2 5 +43 45 +14 26 +44 46 +69 71 +78 80 +50 53 +29 80 +73 75 +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 0 +30 68 +11 31 +6 66 +7 76 +24 68 +8 32 +0 75 +15 68 +33 67 +19 28 +54 60 +7 57 +2 67 +36 45 +54 59 +46 67 +32 52 +14 75 +11 13 +53 56 +0 70 +50 67 +38 50 +3 67 +15 21 +60 64 +17 30 +12 30 +36 67 +3 6 +37 41 +2 79 +2 76 +32 57 +8 57 +46 48 +14 71 +7 66 +9 14 +43 48 +59 61 +4 66 +30 67 +32 35 +79 81 +38 51 +19 22 +1 70 +51 67 +1 69 +35 37 +54 66 +52 67 +12 14 +57 64 +1 80 +25 30 +32 51 +43 47 +3 76 +26 29 +35 67 +36 43 +53 57 +2 78 +43 50 +15 18 +0 73 +15 71 +70 73 +52 66 +37 42 +38 41 +7 14 +38 40 +0 77 +57 63 +56 59 +25 29 +40 42 +7 64 +9 31 +24 27 +36 46 +16 30 +24 26 +23 68 +45 47 +62 64 +0 79 +17 28 +23 28 +35 51 +0 80 +71 73 +1 67 +0 78 +39 42 +48 50 +60 66 +14 30 +71 74 +22 68 +32 53 +25 68 +34 67 +67 69 +21 68 +38 42 +6 76 +15 17 +54 56 +53 66 +7 65 +17 19 +70 72 +15 20 +11 14 +37 43 +28 30 +42 50 +12 31 +7 9 +56 58 +31 67 +76 78 +0 74 +19 23 +59 62 +1 79 +32 67 +5 66 +60 65 +36 44 +3 66 +14 76 +33 35 +23 27 +3 5 +15 69 +58 63 +58 62 +8 31 +44 47 +10 31 +37 51 +15 30 +60 62 +14 74 +10 14 +53 55 +43 49 +27 29 +15 70 +15 19 +48 67 diff --git a/data/candidates/chr9/82_84_partitions.txt b/data/candidates/chr9/82_84_partitions.txt new file mode 100644 index 0000000..fcca41f --- /dev/null +++ b/data/candidates/chr9/82_84_partitions.txt @@ -0,0 +1,479 @@ +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 0 +31 55 +1 52 +54 65 +14 36 +2 81 +61 71 +13 29 +14 17 +12 41 +13 36 +30 59 +32 39 +29 81 +71 75 +44 55 +58 61 +14 16 +53 72 +64 68 +7 46 +74 76 +30 34 +9 11 +0 52 +59 71 +6 50 +29 35 +36 38 +46 53 +7 50 +2 50 +16 26 +7 13 +72 75 +18 20 +13 24 +41 55 +10 41 +37 39 +8 45 +34 38 +46 54 +54 70 +1 81 +56 63 +30 33 +46 49 +25 27 +13 41 +10 43 +26 36 +18 21 +55 59 +57 59 +30 35 +4 29 +34 39 +13 40 +2 4 +29 77 +30 55 +16 24 +8 43 +61 63 +3 81 +44 54 +56 61 +20 24 +24 28 +76 81 +61 68 +8 13 +7 47 +16 23 +29 79 +9 12 +8 10 +13 17 +5 50 +16 21 +0 76 +30 71 +29 75 +35 38 +75 77 +24 29 +77 80 +53 74 +64 67 +77 81 +40 55 +2 52 +57 61 +16 22 +15 26 +42 55 +20 22 +32 55 +77 79 +10 42 +32 34 +7 29 +7 48 +52 76 +13 18 +36 39 +4 7 +63 65 +54 68 +61 64 +55 65 +66 68 +51 53 +58 60 +28 35 +5 7 +7 49 +20 23 +56 62 +25 28 +9 13 +53 76 +19 21 +30 75 +13 20 +43 55 +56 65 +50 52 +46 50 +47 49 +30 32 +32 40 +8 46 +16 18 +10 12 +65 68 +26 35 +68 70 +65 67 +60 71 +26 28 +53 71 +54 71 +16 25 +61 69 +55 57 +13 39 +72 74 +4 81 +2 5 +43 45 +14 26 +44 46 +69 71 +78 80 +50 53 +29 80 +73 75 + +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 0 +30 68 +11 31 +6 66 +7 76 +24 68 +8 32 +0 75 +15 68 +33 67 +19 28 +54 60 +7 57 +2 67 +36 45 +54 59 +46 67 +32 52 +14 75 +11 13 +53 56 +0 70 +50 67 +38 50 +3 67 +15 21 +60 64 +17 30 +12 30 +36 67 +3 6 +37 41 +2 79 +2 76 +32 57 +8 57 +46 48 +14 71 +7 66 +9 14 +43 48 +59 61 +4 66 +30 67 +32 35 +79 81 +38 51 +19 22 +1 70 +51 67 +1 69 +35 37 +54 66 +52 67 +12 14 +57 64 +1 80 +25 30 +32 51 +43 47 +3 76 +26 29 +35 67 +36 43 +53 57 +2 78 +43 50 +15 18 +0 73 +15 71 +70 73 +52 66 +37 42 +38 41 +7 14 +38 40 +0 77 +57 63 +56 59 +25 29 +40 42 +7 64 +9 31 +24 27 +36 46 +16 30 +24 26 +23 68 +45 47 +62 64 +0 79 +17 28 +23 28 +35 51 +0 80 +71 73 +1 67 +0 78 +39 42 +48 50 +60 66 +14 30 +71 74 +22 68 +32 53 +25 68 +34 67 +67 69 +21 68 +38 42 +6 76 +15 17 +54 56 +53 66 +7 65 +17 19 +70 72 +15 20 +11 14 +37 43 +28 30 +42 50 +12 31 +7 9 +56 58 +31 67 +76 78 +0 74 +19 23 +59 62 +1 79 +32 67 +5 66 +60 65 +36 44 +3 66 +14 76 +33 35 +23 27 +3 5 +15 69 +58 63 +58 62 +8 31 +44 47 +10 31 +37 51 +15 30 +60 62 +14 74 +10 14 +53 55 +43 49 +27 29 +15 70 +15 19 +48 67 diff --git a/data/candidates/chr9/83_166_graph.txt b/data/candidates/chr9/83_166_graph.txt new file mode 100644 index 0000000..7faa220 --- /dev/null +++ b/data/candidates/chr9/83_166_graph.txt @@ -0,0 +1,483 @@ +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 82 +82 0 +18 24 +35 74 +55 72 +29 68 +31 78 +5 9 +29 47 +80 82 +14 69 +69 78 +26 68 +9 80 +64 70 +40 74 +4 81 +14 22 +58 68 +3 29 +29 53 +43 45 +46 52 +15 69 +7 9 +70 76 +56 72 +35 45 +62 65 +70 77 +22 27 +3 31 +42 44 +64 72 +59 66 +4 9 +12 78 +54 56 +4 28 +35 46 +53 68 +40 42 +19 21 +44 73 +39 41 +6 28 +39 42 +35 43 +10 14 +2 82 +63 72 +58 60 +35 37 +31 34 +72 74 +8 27 +19 22 +48 51 +32 78 +20 22 +16 25 +61 72 +35 75 +20 24 +29 49 +9 22 +40 73 +14 17 +61 63 +38 74 +16 69 +1 81 +32 35 +71 76 +0 2 +59 65 +44 55 +40 44 +53 57 +36 74 +9 11 +18 25 +18 22 +66 69 +14 78 +22 26 +30 35 +44 53 +3 78 +66 68 +45 52 +19 24 +23 25 +72 76 +5 7 +69 77 +36 38 +58 67 +1 4 +2 78 +54 57 +49 52 +47 51 +38 40 +2 79 +60 62 +16 26 +44 54 +56 60 +15 17 +30 46 +17 22 +10 22 +30 47 +76 78 +11 79 +12 14 +16 68 +35 38 +22 25 +70 72 +56 61 +3 28 +11 80 +63 65 +4 6 +35 76 +59 67 +66 70 +26 28 +8 22 +44 52 +3 30 +6 8 +12 79 +31 35 +47 49 +9 81 +64 66 +0 81 +11 13 +35 39 +49 51 +29 52 +10 13 +72 75 +53 58 +79 82 +50 52 +28 68 +57 60 +33 35 +31 33 +8 28 +35 78 +59 62 +47 52 +39 43 +22 24 +44 72 +17 25 +1 3 +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 82 +82 0 +23 75 +50 78 +25 81 +24 48 +62 75 +29 34 +11 16 +27 30 +0 6 +23 57 +0 12 +11 75 +34 37 +31 38 +32 34 +24 39 +55 59 +69 73 +23 60 +52 55 +23 65 +14 19 +39 45 +76 79 +28 80 +47 80 +55 58 +23 81 +61 78 +19 75 +14 21 +27 39 +51 53 +68 73 +68 75 +62 72 +15 19 +41 45 +28 41 +14 23 +41 80 +24 52 +23 67 +5 10 +31 39 +5 81 +41 47 +7 12 +4 82 +10 75 +28 39 +69 72 +5 79 +25 80 +31 37 +26 39 +61 64 +12 81 +73 75 +77 79 +62 76 +39 47 +53 55 +23 68 +60 78 +30 33 +29 33 +62 69 +10 79 +1 6 +24 26 +28 35 +48 78 +61 76 +24 55 +26 80 +29 35 +12 16 +65 69 +28 30 +48 52 +0 4 +10 12 +61 65 +11 19 +39 46 +41 43 +65 67 +56 58 +62 74 +28 38 +5 80 +50 59 +65 68 +11 17 +51 54 +51 59 +19 23 +3 5 +28 36 +21 23 +34 36 +13 16 +0 3 +13 23 +24 57 +41 44 +60 65 +30 32 +45 47 +57 59 +11 18 +47 79 +12 23 +14 16 +62 71 +27 31 +2 6 +3 6 +0 7 +10 76 +54 59 +8 12 +23 59 +50 60 +12 82 +24 56 +20 23 +48 50 +43 47 +49 78 +27 80 +32 37 +16 18 +47 78 +62 73 +14 20 +16 19 +5 82 +7 10 +8 10 +61 77 +24 47 +9 12 +64 69 +63 69 +23 66 +24 81 +69 71 +42 47 +28 37 +40 45 +6 10 +62 70 +62 64 +28 40 +44 47 diff --git a/data/candidates/chr9/83_166_partitions.txt b/data/candidates/chr9/83_166_partitions.txt new file mode 100644 index 0000000..2d1a347 --- /dev/null +++ b/data/candidates/chr9/83_166_partitions.txt @@ -0,0 +1,484 @@ +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 82 +82 0 +18 24 +35 74 +55 72 +29 68 +31 78 +5 9 +29 47 +80 82 +14 69 +69 78 +26 68 +9 80 +64 70 +40 74 +4 81 +14 22 +58 68 +3 29 +29 53 +43 45 +46 52 +15 69 +7 9 +70 76 +56 72 +35 45 +62 65 +70 77 +22 27 +3 31 +42 44 +64 72 +59 66 +4 9 +12 78 +54 56 +4 28 +35 46 +53 68 +40 42 +19 21 +44 73 +39 41 +6 28 +39 42 +35 43 +10 14 +2 82 +63 72 +58 60 +35 37 +31 34 +72 74 +8 27 +19 22 +48 51 +32 78 +20 22 +16 25 +61 72 +35 75 +20 24 +29 49 +9 22 +40 73 +14 17 +61 63 +38 74 +16 69 +1 81 +32 35 +71 76 +0 2 +59 65 +44 55 +40 44 +53 57 +36 74 +9 11 +18 25 +18 22 +66 69 +14 78 +22 26 +30 35 +44 53 +3 78 +66 68 +45 52 +19 24 +23 25 +72 76 +5 7 +69 77 +36 38 +58 67 +1 4 +2 78 +54 57 +49 52 +47 51 +38 40 +2 79 +60 62 +16 26 +44 54 +56 60 +15 17 +30 46 +17 22 +10 22 +30 47 +76 78 +11 79 +12 14 +16 68 +35 38 +22 25 +70 72 +56 61 +3 28 +11 80 +63 65 +4 6 +35 76 +59 67 +66 70 +26 28 +8 22 +44 52 +3 30 +6 8 +12 79 +31 35 +47 49 +9 81 +64 66 +0 81 +11 13 +35 39 +49 51 +29 52 +10 13 +72 75 +53 58 +79 82 +50 52 +28 68 +57 60 +33 35 +31 33 +8 28 +35 78 +59 62 +47 52 +39 43 +22 24 +44 72 +17 25 +1 3 + +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 82 +82 0 +23 75 +50 78 +25 81 +24 48 +62 75 +29 34 +11 16 +27 30 +0 6 +23 57 +0 12 +11 75 +34 37 +31 38 +32 34 +24 39 +55 59 +69 73 +23 60 +52 55 +23 65 +14 19 +39 45 +76 79 +28 80 +47 80 +55 58 +23 81 +61 78 +19 75 +14 21 +27 39 +51 53 +68 73 +68 75 +62 72 +15 19 +41 45 +28 41 +14 23 +41 80 +24 52 +23 67 +5 10 +31 39 +5 81 +41 47 +7 12 +4 82 +10 75 +28 39 +69 72 +5 79 +25 80 +31 37 +26 39 +61 64 +12 81 +73 75 +77 79 +62 76 +39 47 +53 55 +23 68 +60 78 +30 33 +29 33 +62 69 +10 79 +1 6 +24 26 +28 35 +48 78 +61 76 +24 55 +26 80 +29 35 +12 16 +65 69 +28 30 +48 52 +0 4 +10 12 +61 65 +11 19 +39 46 +41 43 +65 67 +56 58 +62 74 +28 38 +5 80 +50 59 +65 68 +11 17 +51 54 +51 59 +19 23 +3 5 +28 36 +21 23 +34 36 +13 16 +0 3 +13 23 +24 57 +41 44 +60 65 +30 32 +45 47 +57 59 +11 18 +47 79 +12 23 +14 16 +62 71 +27 31 +2 6 +3 6 +0 7 +10 76 +54 59 +8 12 +23 59 +50 60 +12 82 +24 56 +20 23 +48 50 +43 47 +49 78 +27 80 +32 37 +16 18 +47 78 +62 73 +14 20 +16 19 +5 82 +7 10 +8 10 +61 77 +24 47 +9 12 +64 69 +63 69 +23 66 +24 81 +69 71 +42 47 +28 37 +40 45 +6 10 +62 70 +62 64 +28 40 +44 47 diff --git a/data/candidates/chr9/88_206_graph.txt b/data/candidates/chr9/88_206_graph.txt new file mode 100644 index 0000000..4762ac2 --- /dev/null +++ b/data/candidates/chr9/88_206_graph.txt @@ -0,0 +1,510 @@ +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 82 +82 83 +83 84 +84 85 +85 86 +86 87 +87 0 +12 17 +21 33 +47 73 +2 20 +47 81 +6 21 +2 66 +57 59 +38 81 +56 70 +42 54 +0 85 +47 55 +4 85 +62 64 +66 84 +56 58 +23 66 +48 50 +43 45 +24 64 +53 55 +30 32 +28 55 +15 21 +25 29 +68 80 +55 58 +23 29 +20 22 +68 77 +6 19 +2 22 +29 33 +39 54 +25 62 +26 61 +9 13 +31 55 +1 4 +79 81 +36 39 +59 66 +47 72 +9 12 +2 4 +49 54 +68 83 +6 34 +68 75 +68 78 +66 83 +56 69 +3 19 +39 45 +43 49 +6 83 +73 77 +75 77 +12 19 +6 81 +35 54 +77 81 +80 82 +43 46 +25 27 +50 55 +6 85 +23 65 +6 12 +4 87 +59 64 +74 77 +57 68 +5 19 +2 85 +60 63 +67 83 +33 54 +5 85 +3 5 +59 65 +59 61 +40 43 +9 11 +39 47 +80 83 +35 81 +55 61 +83 85 +51 53 +8 15 +6 33 +24 65 +56 71 +44 46 +30 55 +47 49 +6 10 +2 19 +43 47 +69 74 +12 16 +39 81 +36 38 +59 63 +9 15 +27 61 +74 76 +12 15 +35 38 +58 61 +7 10 +77 79 +69 72 +69 71 +16 20 +59 67 +26 62 +56 72 +50 54 +4 86 +27 29 +24 29 +22 66 +32 55 +0 86 +69 73 +7 21 +45 47 +12 14 +28 30 +39 42 +39 41 +60 62 +42 49 +15 20 +40 42 +33 55 +17 20 +81 83 +21 29 +0 2 +40 45 +68 79 +52 54 +34 81 +21 23 +50 53 +28 61 +35 39 +50 52 +7 9 +2 84 +1 87 +57 67 +29 32 +55 72 +47 50 +9 14 +25 64 +47 77 +12 18 +18 20 +10 12 +34 54 +68 74 +7 15 +56 68 +37 39 +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 82 +82 83 +83 84 +84 85 +85 86 +86 87 +87 0 +14 63 +54 83 +5 86 +13 81 +34 56 +44 48 +12 34 +67 78 +27 31 +56 66 +40 55 +16 28 +16 34 +12 86 +39 83 +56 83 +12 32 +14 80 +10 83 +4 12 +36 40 +45 51 +57 64 +12 35 +24 33 +75 79 +81 84 +71 75 +11 35 +81 86 +15 56 +14 64 +40 51 +6 8 +14 79 +78 80 +69 78 +8 86 +23 34 +72 77 +49 51 +12 81 +5 12 +17 22 +27 32 +13 16 +17 28 +17 21 +56 62 +19 21 +66 78 +21 25 +11 83 +2 12 +6 11 +51 54 +59 62 +66 79 +27 33 +67 75 +14 66 +84 86 +45 55 +78 82 +36 83 +17 19 +72 75 +72 74 +40 44 +13 29 +35 83 +41 49 +58 63 +56 64 +58 60 +16 29 +22 34 +40 83 +40 52 +37 83 +0 5 +1 86 +5 11 +41 44 +83 86 +56 61 +71 77 +57 61 +18 22 +56 78 +43 48 +9 83 +22 24 +56 65 +46 49 +35 55 +68 70 +71 73 +52 83 +8 11 +12 31 +1 12 +14 16 +67 70 +1 5 +3 12 +44 55 +53 83 +44 47 +45 49 +38 40 +70 75 +56 63 +17 25 +38 83 +7 86 +26 28 +13 30 +37 40 +2 5 +35 56 +66 75 +40 50 +75 78 +22 25 +45 54 +13 31 +6 86 +28 31 +69 77 +41 43 +12 33 +18 21 +24 26 +58 62 +55 83 +72 76 +5 87 +16 22 +73 75 +24 34 +56 82 +67 69 +58 64 +70 77 +64 66 +82 84 +24 27 +81 85 +9 86 +42 48 +41 48 +16 56 +17 26 +46 48 +76 78 +13 80 +78 81 +29 31 +41 50 +36 55 +14 56 +57 60 +8 10 diff --git a/data/candidates/chr9/88_206_partitions.txt b/data/candidates/chr9/88_206_partitions.txt new file mode 100644 index 0000000..325ce8c --- /dev/null +++ b/data/candidates/chr9/88_206_partitions.txt @@ -0,0 +1,511 @@ +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 82 +82 83 +83 84 +84 85 +85 86 +86 87 +87 0 +12 17 +21 33 +47 73 +2 20 +47 81 +6 21 +2 66 +57 59 +38 81 +56 70 +42 54 +0 85 +47 55 +4 85 +62 64 +66 84 +56 58 +23 66 +48 50 +43 45 +24 64 +53 55 +30 32 +28 55 +15 21 +25 29 +68 80 +55 58 +23 29 +20 22 +68 77 +6 19 +2 22 +29 33 +39 54 +25 62 +26 61 +9 13 +31 55 +1 4 +79 81 +36 39 +59 66 +47 72 +9 12 +2 4 +49 54 +68 83 +6 34 +68 75 +68 78 +66 83 +56 69 +3 19 +39 45 +43 49 +6 83 +73 77 +75 77 +12 19 +6 81 +35 54 +77 81 +80 82 +43 46 +25 27 +50 55 +6 85 +23 65 +6 12 +4 87 +59 64 +74 77 +57 68 +5 19 +2 85 +60 63 +67 83 +33 54 +5 85 +3 5 +59 65 +59 61 +40 43 +9 11 +39 47 +80 83 +35 81 +55 61 +83 85 +51 53 +8 15 +6 33 +24 65 +56 71 +44 46 +30 55 +47 49 +6 10 +2 19 +43 47 +69 74 +12 16 +39 81 +36 38 +59 63 +9 15 +27 61 +74 76 +12 15 +35 38 +58 61 +7 10 +77 79 +69 72 +69 71 +16 20 +59 67 +26 62 +56 72 +50 54 +4 86 +27 29 +24 29 +22 66 +32 55 +0 86 +69 73 +7 21 +45 47 +12 14 +28 30 +39 42 +39 41 +60 62 +42 49 +15 20 +40 42 +33 55 +17 20 +81 83 +21 29 +0 2 +40 45 +68 79 +52 54 +34 81 +21 23 +50 53 +28 61 +35 39 +50 52 +7 9 +2 84 +1 87 +57 67 +29 32 +55 72 +47 50 +9 14 +25 64 +47 77 +12 18 +18 20 +10 12 +34 54 +68 74 +7 15 +56 68 +37 39 + +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 82 +82 83 +83 84 +84 85 +85 86 +86 87 +87 0 +14 63 +54 83 +5 86 +13 81 +34 56 +44 48 +12 34 +67 78 +27 31 +56 66 +40 55 +16 28 +16 34 +12 86 +39 83 +56 83 +12 32 +14 80 +10 83 +4 12 +36 40 +45 51 +57 64 +12 35 +24 33 +75 79 +81 84 +71 75 +11 35 +81 86 +15 56 +14 64 +40 51 +6 8 +14 79 +78 80 +69 78 +8 86 +23 34 +72 77 +49 51 +12 81 +5 12 +17 22 +27 32 +13 16 +17 28 +17 21 +56 62 +19 21 +66 78 +21 25 +11 83 +2 12 +6 11 +51 54 +59 62 +66 79 +27 33 +67 75 +14 66 +84 86 +45 55 +78 82 +36 83 +17 19 +72 75 +72 74 +40 44 +13 29 +35 83 +41 49 +58 63 +56 64 +58 60 +16 29 +22 34 +40 83 +40 52 +37 83 +0 5 +1 86 +5 11 +41 44 +83 86 +56 61 +71 77 +57 61 +18 22 +56 78 +43 48 +9 83 +22 24 +56 65 +46 49 +35 55 +68 70 +71 73 +52 83 +8 11 +12 31 +1 12 +14 16 +67 70 +1 5 +3 12 +44 55 +53 83 +44 47 +45 49 +38 40 +70 75 +56 63 +17 25 +38 83 +7 86 +26 28 +13 30 +37 40 +2 5 +35 56 +66 75 +40 50 +75 78 +22 25 +45 54 +13 31 +6 86 +28 31 +69 77 +41 43 +12 33 +18 21 +24 26 +58 62 +55 83 +72 76 +5 87 +16 22 +73 75 +24 34 +56 82 +67 69 +58 64 +70 77 +64 66 +82 84 +24 27 +81 85 +9 86 +42 48 +41 48 +16 56 +17 26 +46 48 +76 78 +13 80 +78 81 +29 31 +41 50 +36 55 +14 56 +57 60 +8 10 diff --git a/data/candidates/chr9/88_9_graph.txt b/data/candidates/chr9/88_9_graph.txt new file mode 100644 index 0000000..d467898 --- /dev/null +++ b/data/candidates/chr9/88_9_graph.txt @@ -0,0 +1,516 @@ +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 82 +82 83 +83 84 +84 85 +85 86 +86 87 +87 0 +62 87 +29 41 +44 53 +9 47 +10 59 +33 47 +3 71 +82 84 +68 87 +13 26 +15 33 +0 49 +13 41 +1 5 +29 36 +34 43 +62 70 +2 4 +3 5 +5 7 +5 60 +33 36 +27 32 +57 59 +76 81 +52 57 +60 87 +73 77 +76 87 +64 87 +39 43 +23 27 +68 76 +11 55 +71 83 +15 24 +64 70 +71 86 +34 39 +0 71 +12 47 +12 43 +11 53 +81 83 +21 27 +29 40 +73 81 +16 33 +0 3 +48 52 +71 73 +7 60 +8 10 +37 39 +16 20 +18 33 +8 60 +52 87 +13 25 +68 73 +46 48 +9 11 +52 54 +33 35 +15 25 +82 86 +57 60 +23 25 +26 29 +36 39 +26 28 +13 29 +39 42 +11 47 +12 41 +16 22 +5 9 +18 20 +72 83 +27 33 +66 70 +81 86 +27 30 +29 39 +77 81 +61 71 +31 36 +65 68 +44 52 +63 87 +52 56 +34 37 +39 41 +0 2 +8 59 +16 21 +3 61 +44 47 +56 58 +6 9 +75 77 +18 21 +51 87 +73 78 +5 48 +21 33 +62 71 +15 22 +30 36 +22 24 +49 87 +48 50 +12 53 +71 84 +73 79 +12 15 +5 61 +17 19 +52 55 +61 87 +53 55 +7 9 +74 76 +5 49 +31 33 +33 44 +67 70 +34 38 +45 52 +64 66 +68 74 +70 73 +78 81 +14 25 +34 36 +10 56 +11 56 +12 44 +74 77 +16 19 +52 60 +68 70 +50 87 +34 44 +73 83 +12 33 +22 27 +45 48 +81 87 +65 87 +69 73 +0 5 +13 15 +25 27 +30 32 +65 67 +50 52 +78 80 +10 58 +82 85 +2 5 +71 85 +12 42 +17 33 +71 87 +44 46 +5 47 +63 70 +28 30 +73 80 +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 82 +82 83 +83 84 +84 85 +85 86 +86 87 +87 0 +18 57 +11 27 +71 79 +13 57 +72 84 +9 34 +24 56 +35 40 +60 79 +23 26 +0 43 +53 64 +15 26 +43 68 +38 55 +8 80 +43 47 +56 61 +29 56 +56 64 +27 56 +80 87 +8 12 +64 79 +75 83 +49 68 +6 35 +75 82 +72 76 +46 52 +46 51 +6 42 +75 81 +11 26 +69 87 +31 56 +41 55 +70 84 +52 65 +71 77 +65 70 +43 69 +6 41 +7 87 +80 83 +10 32 +35 55 +32 56 +74 84 +42 45 +73 84 +21 23 +15 57 +5 43 +65 69 +59 61 +13 59 +70 72 +1 4 +11 32 +59 80 +34 56 +69 84 +61 64 +46 53 +73 76 +66 68 +51 66 +46 55 +35 39 +62 64 +64 71 +75 79 +4 7 +12 26 +63 79 +20 23 +1 87 +27 29 +21 56 +6 34 +6 43 +22 56 +80 85 +20 57 +51 65 +16 18 +12 14 +38 40 +43 48 +9 12 +17 57 +19 57 +38 41 +8 87 +15 20 +72 77 +42 44 +24 26 +43 45 +74 83 +29 32 +77 79 +50 66 +28 32 +45 55 +33 56 +42 55 +57 61 +6 8 +20 56 +45 47 +54 56 +8 13 +4 43 +25 56 +60 80 +62 79 +15 17 +75 78 +1 7 +76 78 +35 37 +29 31 +50 68 +65 71 +43 49 +15 18 +52 64 +54 64 +47 50 +73 75 +10 34 +30 56 +2 43 +1 43 +69 86 +4 6 +80 86 +67 69 +66 69 +14 57 +1 3 +46 50 +10 33 +36 55 +43 87 +69 85 +37 55 +6 40 +34 55 +26 56 +46 54 +60 62 +47 49 +20 26 +14 26 +80 82 +79 81 +13 80 +3 43 +80 84 +23 56 +15 19 +35 38 +58 61 +11 28 +8 34 +10 12 +13 58 diff --git a/data/candidates/chr9/88_9_partitions.txt b/data/candidates/chr9/88_9_partitions.txt new file mode 100644 index 0000000..9484f62 --- /dev/null +++ b/data/candidates/chr9/88_9_partitions.txt @@ -0,0 +1,517 @@ +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 82 +82 83 +83 84 +84 85 +85 86 +86 87 +87 0 +62 87 +29 41 +44 53 +9 47 +10 59 +33 47 +3 71 +82 84 +68 87 +13 26 +15 33 +0 49 +13 41 +1 5 +29 36 +34 43 +62 70 +2 4 +3 5 +5 7 +5 60 +33 36 +27 32 +57 59 +76 81 +52 57 +60 87 +73 77 +76 87 +64 87 +39 43 +23 27 +68 76 +11 55 +71 83 +15 24 +64 70 +71 86 +34 39 +0 71 +12 47 +12 43 +11 53 +81 83 +21 27 +29 40 +73 81 +16 33 +0 3 +48 52 +71 73 +7 60 +8 10 +37 39 +16 20 +18 33 +8 60 +52 87 +13 25 +68 73 +46 48 +9 11 +52 54 +33 35 +15 25 +82 86 +57 60 +23 25 +26 29 +36 39 +26 28 +13 29 +39 42 +11 47 +12 41 +16 22 +5 9 +18 20 +72 83 +27 33 +66 70 +81 86 +27 30 +29 39 +77 81 +61 71 +31 36 +65 68 +44 52 +63 87 +52 56 +34 37 +39 41 +0 2 +8 59 +16 21 +3 61 +44 47 +56 58 +6 9 +75 77 +18 21 +51 87 +73 78 +5 48 +21 33 +62 71 +15 22 +30 36 +22 24 +49 87 +48 50 +12 53 +71 84 +73 79 +12 15 +5 61 +17 19 +52 55 +61 87 +53 55 +7 9 +74 76 +5 49 +31 33 +33 44 +67 70 +34 38 +45 52 +64 66 +68 74 +70 73 +78 81 +14 25 +34 36 +10 56 +11 56 +12 44 +74 77 +16 19 +52 60 +68 70 +50 87 +34 44 +73 83 +12 33 +22 27 +45 48 +81 87 +65 87 +69 73 +0 5 +13 15 +25 27 +30 32 +65 67 +50 52 +78 80 +10 58 +82 85 +2 5 +71 85 +12 42 +17 33 +71 87 +44 46 +5 47 +63 70 +28 30 +73 80 + +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 82 +82 83 +83 84 +84 85 +85 86 +86 87 +87 0 +18 57 +11 27 +71 79 +13 57 +72 84 +9 34 +24 56 +35 40 +60 79 +23 26 +0 43 +53 64 +15 26 +43 68 +38 55 +8 80 +43 47 +56 61 +29 56 +56 64 +27 56 +80 87 +8 12 +64 79 +75 83 +49 68 +6 35 +75 82 +72 76 +46 52 +46 51 +6 42 +75 81 +11 26 +69 87 +31 56 +41 55 +70 84 +52 65 +71 77 +65 70 +43 69 +6 41 +7 87 +80 83 +10 32 +35 55 +32 56 +74 84 +42 45 +73 84 +21 23 +15 57 +5 43 +65 69 +59 61 +13 59 +70 72 +1 4 +11 32 +59 80 +34 56 +69 84 +61 64 +46 53 +73 76 +66 68 +51 66 +46 55 +35 39 +62 64 +64 71 +75 79 +4 7 +12 26 +63 79 +20 23 +1 87 +27 29 +21 56 +6 34 +6 43 +22 56 +80 85 +20 57 +51 65 +16 18 +12 14 +38 40 +43 48 +9 12 +17 57 +19 57 +38 41 +8 87 +15 20 +72 77 +42 44 +24 26 +43 45 +74 83 +29 32 +77 79 +50 66 +28 32 +45 55 +33 56 +42 55 +57 61 +6 8 +20 56 +45 47 +54 56 +8 13 +4 43 +25 56 +60 80 +62 79 +15 17 +75 78 +1 7 +76 78 +35 37 +29 31 +50 68 +65 71 +43 49 +15 18 +52 64 +54 64 +47 50 +73 75 +10 34 +30 56 +2 43 +1 43 +69 86 +4 6 +80 86 +67 69 +66 69 +14 57 +1 3 +46 50 +10 33 +36 55 +43 87 +69 85 +37 55 +6 40 +34 55 +26 56 +46 54 +60 62 +47 49 +20 26 +14 26 +80 82 +79 81 +13 80 +3 43 +80 84 +23 56 +15 19 +35 38 +58 61 +11 28 +8 34 +10 12 +13 58 diff --git a/data/candidates/chr9/91_175_graph.txt b/data/candidates/chr9/91_175_graph.txt new file mode 100644 index 0000000..c94ba34 --- /dev/null +++ b/data/candidates/chr9/91_175_graph.txt @@ -0,0 +1,530 @@ +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 82 +82 83 +83 84 +84 85 +85 86 +86 87 +87 88 +88 89 +89 90 +90 0 +68 84 +52 65 +49 83 +17 29 +6 41 +12 65 +76 84 +30 39 +59 68 +11 24 +6 87 +3 44 +44 65 +17 38 +53 62 +8 85 +47 65 +49 88 +33 35 +54 75 +60 64 +68 85 +5 88 +34 38 +45 88 +51 81 +4 42 +14 39 +54 77 +2 4 +77 82 +23 29 +39 42 +18 29 +23 25 +60 62 +53 77 +17 24 +29 36 +43 65 +71 74 +9 26 +6 86 +28 41 +77 79 +10 85 +44 88 +64 67 +79 82 +80 82 +88 90 +59 71 +70 84 +50 82 +51 82 +47 49 +12 43 +4 43 +9 28 +57 60 +2 88 +11 15 +75 84 +84 86 +17 39 +26 29 +44 89 +71 73 +55 74 +30 40 +22 24 +29 32 +28 30 +65 85 +36 38 +53 80 +55 72 +72 74 +82 84 +56 58 +30 32 +70 74 +70 75 +11 17 +83 88 +14 17 +33 38 +53 64 +52 80 +24 26 +86 88 +12 39 +7 41 +66 85 +68 71 +12 85 +9 85 +3 43 +23 26 +53 78 +18 24 +17 37 +59 64 +54 61 +52 64 +32 35 +19 23 +1 89 +62 64 +5 41 +0 88 +2 89 +10 26 +54 60 +8 28 +17 36 +2 5 +15 17 +49 52 +20 22 +8 86 +0 89 +48 65 +8 41 +18 22 +44 46 +11 16 +33 39 +13 15 +11 85 +53 63 +21 23 +59 72 +18 23 +58 60 +27 29 +54 57 +31 39 +77 84 +64 66 +45 49 +11 13 +49 65 +58 72 +51 80 +19 22 +19 21 +0 2 +35 38 +83 86 +75 77 +54 74 +64 68 +69 71 +44 47 +12 42 +32 39 +69 84 +54 56 +50 83 +45 47 +55 58 +6 88 +13 39 +9 27 +66 68 +39 41 +49 51 +3 89 +30 41 +32 36 +6 8 +53 79 +4 41 +53 61 +11 26 +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 82 +82 83 +83 84 +84 85 +85 86 +86 87 +87 88 +88 89 +89 90 +90 0 +40 88 +25 56 +27 48 +66 90 +18 27 +40 52 +48 52 +7 37 +61 80 +29 40 +68 72 +0 3 +75 79 +0 12 +8 14 +40 47 +75 85 +4 9 +41 51 +22 57 +54 83 +39 88 +69 74 +4 11 +59 80 +69 79 +14 32 +0 62 +14 34 +18 32 +54 86 +5 89 +75 90 +17 20 +62 80 +41 49 +20 23 +15 22 +75 88 +4 8 +13 59 +3 90 +58 82 +9 11 +53 56 +3 5 +75 86 +7 39 +0 65 +41 52 +29 31 +43 45 +25 52 +8 11 +28 32 +1 11 +69 78 +30 38 +41 43 +14 37 +8 13 +1 12 +40 43 +64 80 +26 52 +0 61 +5 7 +5 39 +60 80 +67 75 +54 58 +68 79 +67 72 +42 48 +67 80 +4 10 +75 80 +15 57 +15 59 +15 58 +69 77 +66 75 +26 48 +73 75 +69 76 +30 35 +46 48 +5 8 +43 46 +12 61 +52 86 +20 27 +17 19 +6 39 +15 21 +42 45 +1 3 +58 80 +18 28 +16 21 +20 26 +74 76 +75 81 +7 14 +13 60 +1 4 +14 16 +75 83 +68 80 +20 25 +29 48 +19 27 +14 33 +42 46 +81 83 +25 53 +55 57 +39 89 +66 80 +42 49 +23 56 +54 82 +17 32 +69 73 +40 46 +65 80 +52 87 +38 40 +28 48 +8 12 +67 73 +62 65 +54 84 +50 52 +29 38 +76 79 +75 89 +13 61 +31 34 +24 56 +31 33 +70 73 +68 70 +14 35 +48 50 +76 78 +75 87 +40 87 +41 50 +14 59 +83 85 +52 54 +40 48 +54 85 +28 31 +7 38 +23 57 +20 24 +65 90 +30 34 +16 20 +53 55 +16 32 +42 44 +30 37 +14 36 +5 90 +58 81 +35 37 +63 65 +63 80 +70 72 diff --git a/data/candidates/chr9/91_175_partitions.txt b/data/candidates/chr9/91_175_partitions.txt new file mode 100644 index 0000000..9d18096 --- /dev/null +++ b/data/candidates/chr9/91_175_partitions.txt @@ -0,0 +1,531 @@ +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 82 +82 83 +83 84 +84 85 +85 86 +86 87 +87 88 +88 89 +89 90 +90 0 +68 84 +52 65 +49 83 +17 29 +6 41 +12 65 +76 84 +30 39 +59 68 +11 24 +6 87 +3 44 +44 65 +17 38 +53 62 +8 85 +47 65 +49 88 +33 35 +54 75 +60 64 +68 85 +5 88 +34 38 +45 88 +51 81 +4 42 +14 39 +54 77 +2 4 +77 82 +23 29 +39 42 +18 29 +23 25 +60 62 +53 77 +17 24 +29 36 +43 65 +71 74 +9 26 +6 86 +28 41 +77 79 +10 85 +44 88 +64 67 +79 82 +80 82 +88 90 +59 71 +70 84 +50 82 +51 82 +47 49 +12 43 +4 43 +9 28 +57 60 +2 88 +11 15 +75 84 +84 86 +17 39 +26 29 +44 89 +71 73 +55 74 +30 40 +22 24 +29 32 +28 30 +65 85 +36 38 +53 80 +55 72 +72 74 +82 84 +56 58 +30 32 +70 74 +70 75 +11 17 +83 88 +14 17 +33 38 +53 64 +52 80 +24 26 +86 88 +12 39 +7 41 +66 85 +68 71 +12 85 +9 85 +3 43 +23 26 +53 78 +18 24 +17 37 +59 64 +54 61 +52 64 +32 35 +19 23 +1 89 +62 64 +5 41 +0 88 +2 89 +10 26 +54 60 +8 28 +17 36 +2 5 +15 17 +49 52 +20 22 +8 86 +0 89 +48 65 +8 41 +18 22 +44 46 +11 16 +33 39 +13 15 +11 85 +53 63 +21 23 +59 72 +18 23 +58 60 +27 29 +54 57 +31 39 +77 84 +64 66 +45 49 +11 13 +49 65 +58 72 +51 80 +19 22 +19 21 +0 2 +35 38 +83 86 +75 77 +54 74 +64 68 +69 71 +44 47 +12 42 +32 39 +69 84 +54 56 +50 83 +45 47 +55 58 +6 88 +13 39 +9 27 +66 68 +39 41 +49 51 +3 89 +30 41 +32 36 +6 8 +53 79 +4 41 +53 61 +11 26 + +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 82 +82 83 +83 84 +84 85 +85 86 +86 87 +87 88 +88 89 +89 90 +90 0 +40 88 +25 56 +27 48 +66 90 +18 27 +40 52 +48 52 +7 37 +61 80 +29 40 +68 72 +0 3 +75 79 +0 12 +8 14 +40 47 +75 85 +4 9 +41 51 +22 57 +54 83 +39 88 +69 74 +4 11 +59 80 +69 79 +14 32 +0 62 +14 34 +18 32 +54 86 +5 89 +75 90 +17 20 +62 80 +41 49 +20 23 +15 22 +75 88 +4 8 +13 59 +3 90 +58 82 +9 11 +53 56 +3 5 +75 86 +7 39 +0 65 +41 52 +29 31 +43 45 +25 52 +8 11 +28 32 +1 11 +69 78 +30 38 +41 43 +14 37 +8 13 +1 12 +40 43 +64 80 +26 52 +0 61 +5 7 +5 39 +60 80 +67 75 +54 58 +68 79 +67 72 +42 48 +67 80 +4 10 +75 80 +15 57 +15 59 +15 58 +69 77 +66 75 +26 48 +73 75 +69 76 +30 35 +46 48 +5 8 +43 46 +12 61 +52 86 +20 27 +17 19 +6 39 +15 21 +42 45 +1 3 +58 80 +18 28 +16 21 +20 26 +74 76 +75 81 +7 14 +13 60 +1 4 +14 16 +75 83 +68 80 +20 25 +29 48 +19 27 +14 33 +42 46 +81 83 +25 53 +55 57 +39 89 +66 80 +42 49 +23 56 +54 82 +17 32 +69 73 +40 46 +65 80 +52 87 +38 40 +28 48 +8 12 +67 73 +62 65 +54 84 +50 52 +29 38 +76 79 +75 89 +13 61 +31 34 +24 56 +31 33 +70 73 +68 70 +14 35 +48 50 +76 78 +75 87 +40 87 +41 50 +14 59 +83 85 +52 54 +40 48 +54 85 +28 31 +7 38 +23 57 +20 24 +65 90 +30 34 +16 20 +53 55 +16 32 +42 44 +30 37 +14 36 +5 90 +58 81 +35 37 +63 65 +63 80 +70 72 diff --git a/data/candidates/chr9/94_57_graph.txt b/data/candidates/chr9/94_57_graph.txt new file mode 100644 index 0000000..b53bd95 --- /dev/null +++ b/data/candidates/chr9/94_57_graph.txt @@ -0,0 +1,546 @@ +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 82 +82 83 +83 84 +84 85 +85 86 +86 87 +87 88 +88 89 +89 90 +90 91 +91 92 +92 93 +93 0 +2 32 +8 26 +16 71 +11 89 +11 82 +28 66 +56 66 +50 92 +83 87 +55 69 +33 93 +29 51 +87 89 +31 49 +7 11 +31 47 +80 92 +16 19 +38 40 +19 27 +25 27 +9 12 +37 46 +50 52 +22 25 +22 24 +1 6 +29 56 +48 50 +12 23 +56 58 +54 69 +4 8 +66 71 +33 38 +0 91 +38 43 +28 57 +28 65 +84 91 +11 74 +32 40 +48 92 +73 77 +12 22 +52 56 +55 66 +89 91 +50 71 +29 57 +11 77 +62 66 +3 26 +62 65 +33 40 +14 19 +18 66 +15 74 +14 22 +38 41 +52 54 +59 63 +1 32 +68 71 +1 89 +73 92 +12 26 +28 59 +14 20 +74 76 +49 51 +29 31 +32 45 +50 72 +34 37 +2 5 +7 9 +19 22 +36 38 +3 29 +19 21 +2 4 +1 93 +13 15 +82 84 +33 39 +12 74 +16 72 +80 84 +37 47 +60 62 +58 60 +67 71 +17 71 +34 92 +28 58 +47 49 +66 69 +26 29 +29 52 +82 87 +5 8 +84 89 +58 66 +19 25 +11 75 +38 42 +4 26 +3 30 +50 70 +59 64 +53 56 +15 73 +32 46 +31 51 +77 80 +1 91 +1 5 +50 69 +6 11 +34 47 +40 45 +69 71 +75 77 +6 8 +19 66 +10 12 +72 92 +30 32 +14 21 +28 64 +86 89 +6 89 +78 80 +61 66 +82 89 +63 65 +67 69 +79 81 +91 93 +85 89 +12 25 +13 74 +1 90 +2 30 +52 69 +59 62 +37 45 +54 56 +37 43 +37 44 +33 92 +34 38 +17 66 +47 92 +83 85 +7 10 +26 28 +12 24 +84 92 +40 44 +86 88 +74 77 +1 33 +41 43 +12 14 +17 19 +35 37 +78 81 +58 61 +34 36 +77 92 +15 72 +15 19 +40 43 +27 66 +83 86 +8 12 +32 47 +11 81 +77 81 +80 82 +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 82 +82 83 +83 84 +84 85 +85 86 +86 87 +87 88 +88 89 +89 90 +90 91 +91 92 +92 93 +93 0 +48 88 +2 25 +34 45 +60 79 +27 49 +0 71 +77 82 +14 34 +46 49 +38 88 +61 69 +89 92 +41 88 +54 68 +9 92 +63 69 +60 76 +50 60 +6 14 +74 88 +50 56 +5 9 +17 33 +61 63 +72 75 +14 16 +88 92 +31 33 +42 47 +12 89 +2 6 +20 23 +6 21 +9 91 +34 41 +56 63 +72 74 +60 80 +60 88 +25 29 +0 27 +72 93 +56 59 +64 69 +75 82 +76 79 +54 70 +23 33 +60 85 +60 72 +60 84 +8 13 +64 66 +27 51 +57 59 +9 11 +60 82 +60 71 +4 9 +44 46 +23 32 +61 71 +3 6 +6 17 +84 88 +16 34 +74 83 +35 41 +48 60 +64 68 +25 31 +24 32 +72 76 +68 70 +57 62 +28 33 +54 63 +9 90 +27 33 +53 55 +21 25 +61 70 +73 88 +60 83 +25 32 +63 66 +10 89 +74 84 +76 82 +88 93 +37 39 +1 9 +25 30 +2 21 +1 27 +9 13 +6 15 +54 71 +27 50 +13 36 +34 49 +34 43 +15 17 +13 38 +85 88 +27 34 +84 87 +6 19 +43 46 +51 54 +28 30 +50 59 +1 92 +46 48 +27 29 +72 88 +40 88 +58 62 +50 55 +54 67 +14 35 +78 82 +28 31 +34 42 +7 14 +2 9 +1 26 +51 53 +37 41 +85 87 +51 71 +18 33 +34 44 +11 13 +42 46 +79 82 +41 47 +56 62 +55 63 +13 35 +13 88 +90 92 +50 53 +39 41 +18 23 +13 89 +64 67 +0 72 +16 33 +4 6 +9 89 +60 81 +77 79 +0 92 +6 18 +0 51 +75 83 +6 9 +13 37 +7 13 +84 86 +41 48 +21 23 +65 67 +6 20 +1 25 +59 61 +49 60 +39 88 +20 22 +23 25 +34 46 +36 41 +54 66 +18 20 +3 9 diff --git a/data/candidates/chr9/94_57_partitions.txt b/data/candidates/chr9/94_57_partitions.txt new file mode 100644 index 0000000..09476bd --- /dev/null +++ b/data/candidates/chr9/94_57_partitions.txt @@ -0,0 +1,547 @@ +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 82 +82 83 +83 84 +84 85 +85 86 +86 87 +87 88 +88 89 +89 90 +90 91 +91 92 +92 93 +93 0 +2 32 +8 26 +16 71 +11 89 +11 82 +28 66 +56 66 +50 92 +83 87 +55 69 +33 93 +29 51 +87 89 +31 49 +7 11 +31 47 +80 92 +16 19 +38 40 +19 27 +25 27 +9 12 +37 46 +50 52 +22 25 +22 24 +1 6 +29 56 +48 50 +12 23 +56 58 +54 69 +4 8 +66 71 +33 38 +0 91 +38 43 +28 57 +28 65 +84 91 +11 74 +32 40 +48 92 +73 77 +12 22 +52 56 +55 66 +89 91 +50 71 +29 57 +11 77 +62 66 +3 26 +62 65 +33 40 +14 19 +18 66 +15 74 +14 22 +38 41 +52 54 +59 63 +1 32 +68 71 +1 89 +73 92 +12 26 +28 59 +14 20 +74 76 +49 51 +29 31 +32 45 +50 72 +34 37 +2 5 +7 9 +19 22 +36 38 +3 29 +19 21 +2 4 +1 93 +13 15 +82 84 +33 39 +12 74 +16 72 +80 84 +37 47 +60 62 +58 60 +67 71 +17 71 +34 92 +28 58 +47 49 +66 69 +26 29 +29 52 +82 87 +5 8 +84 89 +58 66 +19 25 +11 75 +38 42 +4 26 +3 30 +50 70 +59 64 +53 56 +15 73 +32 46 +31 51 +77 80 +1 91 +1 5 +50 69 +6 11 +34 47 +40 45 +69 71 +75 77 +6 8 +19 66 +10 12 +72 92 +30 32 +14 21 +28 64 +86 89 +6 89 +78 80 +61 66 +82 89 +63 65 +67 69 +79 81 +91 93 +85 89 +12 25 +13 74 +1 90 +2 30 +52 69 +59 62 +37 45 +54 56 +37 43 +37 44 +33 92 +34 38 +17 66 +47 92 +83 85 +7 10 +26 28 +12 24 +84 92 +40 44 +86 88 +74 77 +1 33 +41 43 +12 14 +17 19 +35 37 +78 81 +58 61 +34 36 +77 92 +15 72 +15 19 +40 43 +27 66 +83 86 +8 12 +32 47 +11 81 +77 81 +80 82 + +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 82 +82 83 +83 84 +84 85 +85 86 +86 87 +87 88 +88 89 +89 90 +90 91 +91 92 +92 93 +93 0 +48 88 +2 25 +34 45 +60 79 +27 49 +0 71 +77 82 +14 34 +46 49 +38 88 +61 69 +89 92 +41 88 +54 68 +9 92 +63 69 +60 76 +50 60 +6 14 +74 88 +50 56 +5 9 +17 33 +61 63 +72 75 +14 16 +88 92 +31 33 +42 47 +12 89 +2 6 +20 23 +6 21 +9 91 +34 41 +56 63 +72 74 +60 80 +60 88 +25 29 +0 27 +72 93 +56 59 +64 69 +75 82 +76 79 +54 70 +23 33 +60 85 +60 72 +60 84 +8 13 +64 66 +27 51 +57 59 +9 11 +60 82 +60 71 +4 9 +44 46 +23 32 +61 71 +3 6 +6 17 +84 88 +16 34 +74 83 +35 41 +48 60 +64 68 +25 31 +24 32 +72 76 +68 70 +57 62 +28 33 +54 63 +9 90 +27 33 +53 55 +21 25 +61 70 +73 88 +60 83 +25 32 +63 66 +10 89 +74 84 +76 82 +88 93 +37 39 +1 9 +25 30 +2 21 +1 27 +9 13 +6 15 +54 71 +27 50 +13 36 +34 49 +34 43 +15 17 +13 38 +85 88 +27 34 +84 87 +6 19 +43 46 +51 54 +28 30 +50 59 +1 92 +46 48 +27 29 +72 88 +40 88 +58 62 +50 55 +54 67 +14 35 +78 82 +28 31 +34 42 +7 14 +2 9 +1 26 +51 53 +37 41 +85 87 +51 71 +18 33 +34 44 +11 13 +42 46 +79 82 +41 47 +56 62 +55 63 +13 35 +13 88 +90 92 +50 53 +39 41 +18 23 +13 89 +64 67 +0 72 +16 33 +4 6 +9 89 +60 81 +77 79 +0 92 +6 18 +0 51 +75 83 +6 9 +13 37 +7 13 +84 86 +41 48 +21 23 +65 67 +6 20 +1 25 +59 61 +49 60 +39 88 +20 22 +23 25 +34 46 +36 41 +54 66 +18 20 +3 9 diff --git a/data/candidates/chr9/97_96_graph.txt b/data/candidates/chr9/97_96_graph.txt new file mode 100644 index 0000000..0cd5278 --- /dev/null +++ b/data/candidates/chr9/97_96_graph.txt @@ -0,0 +1,569 @@ +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 82 +82 83 +83 84 +84 85 +85 86 +86 87 +87 88 +88 89 +89 90 +90 91 +91 92 +92 93 +93 94 +94 95 +95 96 +96 0 +39 89 +2 6 +5 70 +7 17 +12 67 +60 69 +1 7 +58 74 +44 89 +25 54 +17 90 +0 84 +27 89 +46 78 +23 27 +36 46 +0 7 +83 87 +4 75 +25 27 +44 83 +56 75 +29 34 +12 21 +7 9 +17 21 +0 91 +70 73 +23 61 +83 85 +47 56 +47 54 +35 54 +0 4 +39 44 +60 68 +11 68 +38 43 +89 95 +29 31 +38 89 +25 32 +44 88 +20 27 +75 82 +20 23 +9 11 +20 89 +56 74 +1 6 +22 64 +31 33 +59 73 +24 58 +27 38 +47 55 +38 45 +34 54 +49 53 +35 50 +54 57 +46 80 +48 53 +12 22 +63 68 +9 68 +66 68 +6 68 +9 17 +29 36 +9 12 +84 96 +35 48 +26 30 +62 68 +89 91 +87 89 +89 94 +77 79 +46 56 +12 68 +4 73 +46 48 +13 15 +0 2 +36 38 +40 43 +40 42 +83 88 +15 17 +9 15 +41 43 +44 82 +8 68 +4 72 +61 64 +84 95 +26 29 +9 16 +0 95 +6 8 +75 77 +73 75 +24 57 +76 82 +29 35 +29 38 +38 44 +75 84 +51 54 +12 65 +63 65 +41 44 +38 46 +46 81 +75 83 +5 69 +65 67 +76 79 +17 20 +48 54 +65 68 +76 81 +46 82 +19 21 +13 17 +23 58 +29 33 +28 38 +35 46 +23 59 +61 63 +26 31 +89 93 +32 34 +12 15 +22 61 +10 68 +93 95 +45 82 +4 6 +71 73 +0 3 +0 75 +60 62 +38 40 +55 57 +2 4 +50 54 +18 20 +23 60 +17 89 +26 32 +20 22 +85 95 +23 25 +12 14 +25 57 +5 71 +37 46 +91 93 +32 54 +51 53 +5 72 +18 21 +52 54 +85 87 +48 50 +40 44 +86 89 +7 91 +59 74 +0 92 +59 69 +57 74 +75 78 +85 89 +56 78 +59 70 +50 53 +92 95 +12 64 +79 81 +13 21 +6 69 +26 28 +78 80 +17 91 +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 82 +82 83 +83 84 +84 85 +85 86 +86 87 +87 88 +88 89 +89 90 +90 91 +91 92 +92 93 +93 94 +94 95 +95 96 +96 0 +64 91 +37 78 +4 88 +40 78 +49 91 +11 40 +90 95 +52 78 +24 34 +35 82 +13 22 +53 67 +69 79 +52 62 +43 78 +2 10 +35 37 +69 74 +10 88 +68 89 +45 95 +48 93 +22 88 +23 31 +49 63 +69 85 +0 45 +53 65 +68 87 +18 88 +68 74 +64 68 +24 27 +10 40 +22 82 +71 79 +10 18 +2 42 +2 90 +43 47 +1 90 +53 66 +24 33 +31 39 +81 85 +50 52 +68 77 +3 88 +5 8 +71 76 +57 63 +81 83 +27 30 +11 18 +47 49 +49 64 +56 59 +21 88 +71 78 +3 7 +36 82 +1 42 +11 14 +90 92 +12 40 +68 75 +53 61 +33 39 +27 29 +55 64 +69 71 +23 40 +43 45 +37 82 +24 32 +82 87 +11 13 +55 63 +20 88 +83 86 +43 52 +3 90 +24 29 +27 32 +43 51 +37 81 +30 32 +67 77 +72 74 +84 86 +47 95 +69 72 +52 77 +34 37 +46 95 +3 10 +32 39 +72 76 +37 39 +3 9 +15 20 +22 24 +56 60 +33 38 +3 5 +49 52 +39 78 +8 88 +45 47 +58 60 +13 40 +16 20 +64 66 +1 44 +55 65 +17 19 +43 49 +68 85 +11 16 +1 95 +33 37 +64 89 +15 21 +68 76 +54 65 +3 8 +5 7 +80 85 +14 22 +25 28 +48 95 +49 62 +57 61 +90 93 +48 94 +19 88 +24 26 +72 75 +8 10 +88 90 +43 50 +22 87 +57 62 +14 16 +53 62 +1 45 +70 79 +23 29 +55 60 +53 60 +56 63 +42 78 +2 40 +16 18 +48 91 +79 85 +53 55 +56 58 +25 29 +41 78 +2 41 +22 40 +34 82 +42 44 +1 96 +14 21 +31 40 +82 86 +71 77 +90 94 +68 86 +57 60 +24 82 +69 73 +64 67 +45 96 +64 90 +4 8 +37 79 +52 67 +48 92 +37 80 +16 19 +3 6 +68 88 +23 30 +81 84 diff --git a/data/candidates/chr9/97_96_partitions.txt b/data/candidates/chr9/97_96_partitions.txt new file mode 100644 index 0000000..dcdde82 --- /dev/null +++ b/data/candidates/chr9/97_96_partitions.txt @@ -0,0 +1,570 @@ +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 82 +82 83 +83 84 +84 85 +85 86 +86 87 +87 88 +88 89 +89 90 +90 91 +91 92 +92 93 +93 94 +94 95 +95 96 +96 0 +39 89 +2 6 +5 70 +7 17 +12 67 +60 69 +1 7 +58 74 +44 89 +25 54 +17 90 +0 84 +27 89 +46 78 +23 27 +36 46 +0 7 +83 87 +4 75 +25 27 +44 83 +56 75 +29 34 +12 21 +7 9 +17 21 +0 91 +70 73 +23 61 +83 85 +47 56 +47 54 +35 54 +0 4 +39 44 +60 68 +11 68 +38 43 +89 95 +29 31 +38 89 +25 32 +44 88 +20 27 +75 82 +20 23 +9 11 +20 89 +56 74 +1 6 +22 64 +31 33 +59 73 +24 58 +27 38 +47 55 +38 45 +34 54 +49 53 +35 50 +54 57 +46 80 +48 53 +12 22 +63 68 +9 68 +66 68 +6 68 +9 17 +29 36 +9 12 +84 96 +35 48 +26 30 +62 68 +89 91 +87 89 +89 94 +77 79 +46 56 +12 68 +4 73 +46 48 +13 15 +0 2 +36 38 +40 43 +40 42 +83 88 +15 17 +9 15 +41 43 +44 82 +8 68 +4 72 +61 64 +84 95 +26 29 +9 16 +0 95 +6 8 +75 77 +73 75 +24 57 +76 82 +29 35 +29 38 +38 44 +75 84 +51 54 +12 65 +63 65 +41 44 +38 46 +46 81 +75 83 +5 69 +65 67 +76 79 +17 20 +48 54 +65 68 +76 81 +46 82 +19 21 +13 17 +23 58 +29 33 +28 38 +35 46 +23 59 +61 63 +26 31 +89 93 +32 34 +12 15 +22 61 +10 68 +93 95 +45 82 +4 6 +71 73 +0 3 +0 75 +60 62 +38 40 +55 57 +2 4 +50 54 +18 20 +23 60 +17 89 +26 32 +20 22 +85 95 +23 25 +12 14 +25 57 +5 71 +37 46 +91 93 +32 54 +51 53 +5 72 +18 21 +52 54 +85 87 +48 50 +40 44 +86 89 +7 91 +59 74 +0 92 +59 69 +57 74 +75 78 +85 89 +56 78 +59 70 +50 53 +92 95 +12 64 +79 81 +13 21 +6 69 +26 28 +78 80 +17 91 + +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 82 +82 83 +83 84 +84 85 +85 86 +86 87 +87 88 +88 89 +89 90 +90 91 +91 92 +92 93 +93 94 +94 95 +95 96 +96 0 +64 91 +37 78 +4 88 +40 78 +49 91 +11 40 +90 95 +52 78 +24 34 +35 82 +13 22 +53 67 +69 79 +52 62 +43 78 +2 10 +35 37 +69 74 +10 88 +68 89 +45 95 +48 93 +22 88 +23 31 +49 63 +69 85 +0 45 +53 65 +68 87 +18 88 +68 74 +64 68 +24 27 +10 40 +22 82 +71 79 +10 18 +2 42 +2 90 +43 47 +1 90 +53 66 +24 33 +31 39 +81 85 +50 52 +68 77 +3 88 +5 8 +71 76 +57 63 +81 83 +27 30 +11 18 +47 49 +49 64 +56 59 +21 88 +71 78 +3 7 +36 82 +1 42 +11 14 +90 92 +12 40 +68 75 +53 61 +33 39 +27 29 +55 64 +69 71 +23 40 +43 45 +37 82 +24 32 +82 87 +11 13 +55 63 +20 88 +83 86 +43 52 +3 90 +24 29 +27 32 +43 51 +37 81 +30 32 +67 77 +72 74 +84 86 +47 95 +69 72 +52 77 +34 37 +46 95 +3 10 +32 39 +72 76 +37 39 +3 9 +15 20 +22 24 +56 60 +33 38 +3 5 +49 52 +39 78 +8 88 +45 47 +58 60 +13 40 +16 20 +64 66 +1 44 +55 65 +17 19 +43 49 +68 85 +11 16 +1 95 +33 37 +64 89 +15 21 +68 76 +54 65 +3 8 +5 7 +80 85 +14 22 +25 28 +48 95 +49 62 +57 61 +90 93 +48 94 +19 88 +24 26 +72 75 +8 10 +88 90 +43 50 +22 87 +57 62 +14 16 +53 62 +1 45 +70 79 +23 29 +55 60 +53 60 +56 63 +42 78 +2 40 +16 18 +48 91 +79 85 +53 55 +56 58 +25 29 +41 78 +2 41 +22 40 +34 82 +42 44 +1 96 +14 21 +31 40 +82 86 +71 77 +90 94 +68 86 +57 60 +24 82 +69 73 +64 67 +45 96 +64 90 +4 8 +37 79 +52 67 +48 92 +37 80 +16 19 +3 6 +68 88 +23 30 +81 84 diff --git a/data/candidates/chr9/99_2_graph.txt b/data/candidates/chr9/99_2_graph.txt new file mode 100644 index 0000000..4cd475c --- /dev/null +++ b/data/candidates/chr9/99_2_graph.txt @@ -0,0 +1,578 @@ +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 82 +82 83 +83 84 +84 85 +85 86 +86 87 +87 88 +88 89 +89 90 +90 91 +91 92 +92 93 +93 94 +94 95 +95 96 +96 97 +97 98 +98 0 +51 88 +13 56 +2 89 +10 66 +49 54 +36 44 +22 39 +18 32 +88 91 +10 15 +20 93 +4 18 +18 31 +6 67 +48 55 +5 89 +56 87 +74 85 +26 32 +13 55 +91 97 +4 19 +21 28 +63 69 +15 34 +77 86 +92 95 +92 94 +26 31 +6 8 +62 77 +25 35 +21 25 +25 28 +59 65 +0 3 +56 59 +40 88 +14 47 +21 31 +71 85 +4 20 +80 83 +16 18 +25 34 +5 9 +11 13 +95 98 +69 86 +42 47 +16 34 +35 37 +71 77 +0 20 +0 91 +55 88 +62 86 +93 95 +21 30 +36 47 +60 86 +15 47 +74 84 +20 22 +25 33 +38 43 +48 51 +39 93 +5 8 +82 85 +23 38 +75 83 +77 83 +74 83 +60 65 +80 86 +39 88 +38 42 +5 88 +50 53 +25 32 +14 55 +79 86 +71 86 +10 13 +37 44 +77 79 +18 34 +25 37 +0 93 +88 90 +60 62 +11 58 +58 65 +8 10 +51 54 +6 88 +0 90 +9 17 +69 71 +65 68 +66 68 +29 31 +74 76 +35 47 +79 83 +23 25 +88 93 +21 24 +72 76 +12 57 +7 10 +3 5 +69 88 +36 46 +10 65 +21 29 +72 77 +15 17 +61 64 +1 3 +23 39 +67 88 +42 88 +68 88 +47 55 +3 89 +21 23 +88 92 +44 46 +61 65 +6 66 +64 69 +62 71 +62 64 +0 2 +65 69 +42 44 +10 14 +26 28 +49 53 +51 53 +54 88 +82 86 +0 97 +60 87 +50 52 +5 18 +40 42 +93 98 +86 88 +38 44 +42 46 +56 58 +6 10 +62 70 +27 29 +78 86 +10 58 +22 93 +38 41 +0 4 +42 45 +38 40 +72 85 +27 31 +10 17 +48 88 +49 55 +49 51 +56 60 +15 35 +5 17 +95 97 +2 90 +91 95 +18 33 +23 37 +82 84 +96 98 +12 58 +62 69 +19 31 +42 48 +73 76 +12 56 +20 31 +75 77 +56 88 +80 82 +81 86 +73 85 +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 82 +82 83 +83 84 +84 85 +85 86 +86 87 +87 88 +88 89 +89 90 +90 91 +91 92 +92 93 +93 94 +94 95 +95 96 +96 97 +97 98 +98 0 +8 32 +11 22 +48 91 +6 97 +6 84 +33 77 +77 80 +27 36 +55 79 +6 26 +10 16 +59 69 +4 46 +57 62 +17 30 +83 89 +69 72 +20 25 +35 72 +41 57 +51 91 +57 66 +54 89 +55 77 +17 29 +82 89 +7 22 +42 54 +6 92 +87 91 +4 45 +40 70 +2 47 +86 89 +34 74 +62 65 +83 86 +4 47 +68 73 +91 94 +18 20 +7 84 +64 68 +39 43 +28 36 +48 54 +56 66 +37 72 +6 36 +18 28 +1 4 +47 94 +4 44 +53 90 +79 82 +84 92 +11 18 +65 67 +58 61 +60 68 +67 77 +74 77 +61 63 +40 58 +41 56 +34 36 +67 75 +40 72 +20 28 +6 22 +12 15 +12 18 +86 92 +7 82 +54 90 +35 74 +6 96 +5 44 +32 34 +10 31 +36 39 +11 15 +14 16 +5 97 +28 34 +20 23 +47 91 +58 70 +42 55 +61 68 +79 89 +50 54 +1 97 +7 11 +46 54 +53 91 +19 21 +47 54 +58 69 +59 68 +28 31 +6 93 +40 43 +94 96 +62 66 +44 54 +38 72 +1 5 +83 85 +85 92 +41 55 +2 95 +77 82 +20 26 +6 24 +39 72 +55 89 +20 27 +70 72 +33 74 +87 89 +8 77 +67 74 +55 78 +79 81 +39 44 +64 67 +2 97 +52 91 +63 65 +9 31 +12 14 +17 28 +16 30 +68 74 +6 23 +18 22 +13 16 +2 94 +50 91 +2 4 +59 61 +41 43 +3 47 +49 91 +55 67 +68 72 +43 54 +5 98 +8 31 +7 77 +78 80 +31 34 +41 58 +37 39 +6 25 +40 71 +91 93 +7 83 +12 17 +12 16 +19 22 +8 33 +26 36 +11 16 +56 67 +16 31 +87 92 +57 61 +28 30 +93 96 +7 9 +6 39 +5 39 +45 54 +77 81 +0 5 +87 90 +9 11 +20 24 +63 68 +1 98 +67 76 +48 50 +35 73 +2 96 +36 72 +52 54 diff --git a/data/candidates/chr9/99_2_partitions.txt b/data/candidates/chr9/99_2_partitions.txt new file mode 100644 index 0000000..677b2af --- /dev/null +++ b/data/candidates/chr9/99_2_partitions.txt @@ -0,0 +1,579 @@ +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 82 +82 83 +83 84 +84 85 +85 86 +86 87 +87 88 +88 89 +89 90 +90 91 +91 92 +92 93 +93 94 +94 95 +95 96 +96 97 +97 98 +98 0 +51 88 +13 56 +2 89 +10 66 +49 54 +36 44 +22 39 +18 32 +88 91 +10 15 +20 93 +4 18 +18 31 +6 67 +48 55 +5 89 +56 87 +74 85 +26 32 +13 55 +91 97 +4 19 +21 28 +63 69 +15 34 +77 86 +92 95 +92 94 +26 31 +6 8 +62 77 +25 35 +21 25 +25 28 +59 65 +0 3 +56 59 +40 88 +14 47 +21 31 +71 85 +4 20 +80 83 +16 18 +25 34 +5 9 +11 13 +95 98 +69 86 +42 47 +16 34 +35 37 +71 77 +0 20 +0 91 +55 88 +62 86 +93 95 +21 30 +36 47 +60 86 +15 47 +74 84 +20 22 +25 33 +38 43 +48 51 +39 93 +5 8 +82 85 +23 38 +75 83 +77 83 +74 83 +60 65 +80 86 +39 88 +38 42 +5 88 +50 53 +25 32 +14 55 +79 86 +71 86 +10 13 +37 44 +77 79 +18 34 +25 37 +0 93 +88 90 +60 62 +11 58 +58 65 +8 10 +51 54 +6 88 +0 90 +9 17 +69 71 +65 68 +66 68 +29 31 +74 76 +35 47 +79 83 +23 25 +88 93 +21 24 +72 76 +12 57 +7 10 +3 5 +69 88 +36 46 +10 65 +21 29 +72 77 +15 17 +61 64 +1 3 +23 39 +67 88 +42 88 +68 88 +47 55 +3 89 +21 23 +88 92 +44 46 +61 65 +6 66 +64 69 +62 71 +62 64 +0 2 +65 69 +42 44 +10 14 +26 28 +49 53 +51 53 +54 88 +82 86 +0 97 +60 87 +50 52 +5 18 +40 42 +93 98 +86 88 +38 44 +42 46 +56 58 +6 10 +62 70 +27 29 +78 86 +10 58 +22 93 +38 41 +0 4 +42 45 +38 40 +72 85 +27 31 +10 17 +48 88 +49 55 +49 51 +56 60 +15 35 +5 17 +95 97 +2 90 +91 95 +18 33 +23 37 +82 84 +96 98 +12 58 +62 69 +19 31 +42 48 +73 76 +12 56 +20 31 +75 77 +56 88 +80 82 +81 86 +73 85 + +0 1 +1 2 +2 3 +3 4 +4 5 +5 6 +6 7 +7 8 +8 9 +9 10 +10 11 +11 12 +12 13 +13 14 +14 15 +15 16 +16 17 +17 18 +18 19 +19 20 +20 21 +21 22 +22 23 +23 24 +24 25 +25 26 +26 27 +27 28 +28 29 +29 30 +30 31 +31 32 +32 33 +33 34 +34 35 +35 36 +36 37 +37 38 +38 39 +39 40 +40 41 +41 42 +42 43 +43 44 +44 45 +45 46 +46 47 +47 48 +48 49 +49 50 +50 51 +51 52 +52 53 +53 54 +54 55 +55 56 +56 57 +57 58 +58 59 +59 60 +60 61 +61 62 +62 63 +63 64 +64 65 +65 66 +66 67 +67 68 +68 69 +69 70 +70 71 +71 72 +72 73 +73 74 +74 75 +75 76 +76 77 +77 78 +78 79 +79 80 +80 81 +81 82 +82 83 +83 84 +84 85 +85 86 +86 87 +87 88 +88 89 +89 90 +90 91 +91 92 +92 93 +93 94 +94 95 +95 96 +96 97 +97 98 +98 0 +8 32 +11 22 +48 91 +6 97 +6 84 +33 77 +77 80 +27 36 +55 79 +6 26 +10 16 +59 69 +4 46 +57 62 +17 30 +83 89 +69 72 +20 25 +35 72 +41 57 +51 91 +57 66 +54 89 +55 77 +17 29 +82 89 +7 22 +42 54 +6 92 +87 91 +4 45 +40 70 +2 47 +86 89 +34 74 +62 65 +83 86 +4 47 +68 73 +91 94 +18 20 +7 84 +64 68 +39 43 +28 36 +48 54 +56 66 +37 72 +6 36 +18 28 +1 4 +47 94 +4 44 +53 90 +79 82 +84 92 +11 18 +65 67 +58 61 +60 68 +67 77 +74 77 +61 63 +40 58 +41 56 +34 36 +67 75 +40 72 +20 28 +6 22 +12 15 +12 18 +86 92 +7 82 +54 90 +35 74 +6 96 +5 44 +32 34 +10 31 +36 39 +11 15 +14 16 +5 97 +28 34 +20 23 +47 91 +58 70 +42 55 +61 68 +79 89 +50 54 +1 97 +7 11 +46 54 +53 91 +19 21 +47 54 +58 69 +59 68 +28 31 +6 93 +40 43 +94 96 +62 66 +44 54 +38 72 +1 5 +83 85 +85 92 +41 55 +2 95 +77 82 +20 26 +6 24 +39 72 +55 89 +20 27 +70 72 +33 74 +87 89 +8 77 +67 74 +55 78 +79 81 +39 44 +64 67 +2 97 +52 91 +63 65 +9 31 +12 14 +17 28 +16 30 +68 74 +6 23 +18 22 +13 16 +2 94 +50 91 +2 4 +59 61 +41 43 +3 47 +49 91 +55 67 +68 72 +43 54 +5 98 +8 31 +7 77 +78 80 +31 34 +41 58 +37 39 +6 25 +40 71 +91 93 +7 83 +12 17 +12 16 +19 22 +8 33 +26 36 +11 16 +56 67 +16 31 +87 92 +57 61 +28 30 +93 96 +7 9 +6 39 +5 39 +45 54 +77 81 +0 5 +87 90 +9 11 +20 24 +63 68 +1 98 +67 76 +48 50 +35 73 +2 96 +36 72 +52 54