From a953e9721bcbadd30c7c1e207650b6ed05a8dbc7 Mon Sep 17 00:00:00 2001 From: Yuwei Sun Date: Wed, 14 May 2025 12:20:08 -0400 Subject: [PATCH 1/2] Add setup.py --- setup.py | 19 +++++++++++++++++++ 1 file changed, 19 insertions(+) create mode 100644 setup.py diff --git a/setup.py b/setup.py new file mode 100644 index 0000000..60e727e --- /dev/null +++ b/setup.py @@ -0,0 +1,19 @@ +from setuptools import setup + +setup( + name='reform', + version='1.1.0', + py_modules=['reform'], + install_requires=[ + 'biopython', + 'pgzip', + ], + entry_points={ + 'console_scripts': [ + 'reform = reform:main', + ], + }, + author="gencorefacility", + description='A tool for editing genome sequences and annotation files', + license='BSD-3-Clause', +) \ No newline at end of file From 3ef3b6382a51604dd92491675bea01243c51b965 Mon Sep 17 00:00:00 2001 From: Eric Date: Mon, 19 May 2025 11:08:01 -0400 Subject: [PATCH 2/2] Update setup.py --- setup.py | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/setup.py b/setup.py index 60e727e..c7dd6eb 100644 --- a/setup.py +++ b/setup.py @@ -5,7 +5,7 @@ version='1.1.0', py_modules=['reform'], install_requires=[ - 'biopython', + 'biopython>=1.78', 'pgzip', ], entry_points={ @@ -16,4 +16,4 @@ author="gencorefacility", description='A tool for editing genome sequences and annotation files', license='BSD-3-Clause', -) \ No newline at end of file +)