diff --git a/.gitignore b/.gitignore new file mode 100644 index 0000000..5b6a065 --- /dev/null +++ b/.gitignore @@ -0,0 +1,4 @@ +.Rproj.user +.Rhistory +.RData +.Ruserdata diff --git a/16SrRNA-hex-tutorial.Rproj b/16SrRNA-hex-tutorial.Rproj new file mode 100644 index 0000000..8e3c2eb --- /dev/null +++ b/16SrRNA-hex-tutorial.Rproj @@ -0,0 +1,13 @@ +Version: 1.0 + +RestoreWorkspace: Default +SaveWorkspace: Default +AlwaysSaveHistory: Default + +EnableCodeIndexing: Yes +UseSpacesForTab: Yes +NumSpacesForTab: 2 +Encoding: UTF-8 + +RnwWeave: Sweave +LaTeX: pdfLaTeX diff --git a/README.md b/README.md index 4f428fc..2d6c4e8 100644 --- a/README.md +++ b/README.md @@ -6,6 +6,8 @@ The dataset we will be working are the practice dataset from the [H3ABioNet 16S The table below contains the metadata associated with the dog stool samples. There are three dogs which are treated with increased percentage of a compound in their diet: 5 different treatments (0-4, representing an increased percentage of a compound in their diet). +working on 16S tutorial using DADA2 + Sample | Dog | Treatment | Read counts r1 | Read counts r2 ------ | --- | --------- | -------------- | -------------- Dog1 | B | 2 | 118343 | 118343