diff --git a/docs/api.rst b/docs/api.rst index 60ea07b..29b2bf5 100644 --- a/docs/api.rst +++ b/docs/api.rst @@ -10,10 +10,14 @@ Base :nosignatures: :toctree: generated/ - from_newick - to_newick from_ancestry + from_edges + from_newick + from_pairs to_ancestry + to_edges + to_newick + to_pairs IO ---------------- @@ -36,10 +40,11 @@ Statistics :toctree: generated/ stats.cophenetic_distances - stats.pairwise_distances stats.cov - stats.precision stats.incidence + stats.pairwise_distances + stats.precision + stats.robinson_foulds Utils ---------------- @@ -56,7 +61,12 @@ Utils utils.newick.find_num_leaves utils.newick.remove_branch_lengths utils.newick.remove_parent_labels - utils.vector.check_vector utils.vector.add_leaf + utils.vector.check_vector utils.vector.get_common_ancestor + utils.vector.get_node_depth + utils.vector.get_node_depths + utils.vector.queue_shuffle utils.vector.remove_leaf + utils.vector.reroot + utils.vector.reroot_at_random