fix(engine) prevent MVCC race in blockRunWithWaitpoint pending check #4753

Job	Run time
sdk-compat / Node.js 20.20 (ubuntu-latest)	1m 55s
e2e / 🧪 CLI v3 tests (windows-latest - pnpm)	3m 43s
e2e / 🧪 CLI v3 tests (ubuntu-latest - npm)	1m 50s
sdk-compat / Cloudflare Workers	2m 2s
e2e / 🧪 CLI v3 tests (ubuntu-latest - pnpm)	1m 57s
units / packages / 🧪 Unit Tests: Packages (1, 1)	8m 7s
sdk-compat / Bun Runtime	1m 52s
e2e / 🧪 CLI v3 tests (windows-latest - npm)	4m 0s
typecheck / typecheck	6m 15s
sdk-compat / Node.js 22.12 (ubuntu-latest)	1m 47s
sdk-compat / Deno Runtime	1m 55s
units / webapp / 🧪 Unit Tests: Webapp (5, 8)	7m 32s
units / internal / 🧪 Unit Tests: Internal (6, 8)	4m 36s
units / webapp / 🧪 Unit Tests: Webapp (3, 8)	3m 7s
units / webapp / 🧪 Unit Tests: Webapp (8, 8)	2m 28s
units / webapp / 🧪 Unit Tests: Webapp (4, 8)	5m 46s
units / webapp / 🧪 Unit Tests: Webapp (2, 8)	3m 51s
units / internal / 🧪 Unit Tests: Internal (7, 8)	5m 20s
units / internal / 🧪 Unit Tests: Internal (4, 8)	5m 7s
units / webapp / 🧪 Unit Tests: Webapp (1, 8)	5m 40s
units / internal / 🧪 Unit Tests: Internal (1, 8)	5m 57s
units / internal / 🧪 Unit Tests: Internal (5, 8)	4m 4s
units / internal / 🧪 Unit Tests: Internal (8, 8)	3m 13s
units / webapp / 🧪 Unit Tests: Webapp (6, 8)	3m 43s
units / webapp / 🧪 Unit Tests: Webapp (7, 8)	5m 46s
units / internal / 🧪 Unit Tests: Internal (2, 8)	9m 44s
units / internal / 🧪 Unit Tests: Internal (3, 8)	6m 39s
units / webapp / 📊 Merge Reports	39s
units / packages / 📊 Merge Reports	19s
units / internal / 📊 Merge Reports	22s
	1h 59m 16s

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