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GHA: pin petab test suite #2917

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Merged
dweindl merged 1 commit into from
Jul 21, 2025
Merged

GHA: pin petab test suite #2917

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16 changes: 13 additions & 3 deletions .github/workflows/test_petab_test_suite.yml
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Original file line number Diff line number Diff line change
Expand Up @@ -60,11 +60,21 @@ jobs:

# retrieve test models
- name: Download and install PEtab test suite
# FIXME: Until we have proper PEtab v2 import
# (https://github.com/AMICI-dev/AMICI/issues/2662),
# we need `10ffb050380933b60ac192962bf9550a9df65a9c`
# with the pseudo-v2 format instead of `main`
# run: |
# git clone --depth 1 --branch main \
# https://github.com/PEtab-dev/petab_test_suite \
# && source ./venv/bin/activate \
# && cd petab_test_suite && pip3 install -e .
run: |
git clone --depth 1 --branch main \
https://github.com/PEtab-dev/petab_test_suite \
git clone https://github.com/PEtab-dev/petab_test_suite \
&& source ./venv/bin/activate \
&& cd petab_test_suite && pip3 install -e .
&& cd petab_test_suite \
&& git checkout 10ffb050380933b60ac192962bf9550a9df65a9c \
&& pip3 install -e .

- name: Install PEtab benchmark collection
run: |
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