Skip to content
Merged
Show file tree
Hide file tree
Changes from all commits
Commits
File filter

Filter by extension

Filter by extension


Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
2 changes: 1 addition & 1 deletion .github/workflows/test_benchmark_collection_models.yml
Original file line number Diff line number Diff line change
Expand Up @@ -132,7 +132,7 @@ jobs:
&& python3 -m pip install -U sympy \
&& python3 -m pip install git+https://github.com/ICB-DCM/fiddy.git@amici100

- run: pip uninstall -y diffrax && pip install git+https://github.com/patrick-kidger/diffrax@dev # TODO FIXME https://github.com/patrick-kidger/diffrax/issues/654 + event dirs
- run: pip uninstall -y diffrax && pip install git+https://github.com/patrick-kidger/diffrax@main # TODO FIXME https://github.com/patrick-kidger/diffrax/issues/654 + event dirs

- name: Download benchmark collection
run: |
Expand Down
2 changes: 1 addition & 1 deletion scripts/installAmiciSource.sh
Original file line number Diff line number Diff line change
Expand Up @@ -38,7 +38,7 @@ python -m pip install --upgrade pip wheel
# The latter is necessary for code coverage to work.
python -m pip install --upgrade pip setuptools cmake_build_extension==0.6.0 numpy petab swig
python -m pip install git+https://github.com/pysb/pysb@master # for SPM with compartments
python -m pip install git+https://github.com/patrick-kidger/diffrax@dev # for events with direction
python -m pip install git+https://github.com/patrick-kidger/diffrax@main # for events with direction
python -m pip install optax # for jax petab notebook
AMICI_BUILD_TEMP="${AMICI_PATH}/python/sdist/build/temp" \
python -m pip install --verbose -e "${AMICI_PATH}/python/sdist[petab,test,vis,jax]" --no-build-isolation
Expand Down
Loading