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Achievements

Achievement: Arctic Code Vault ContributorAchievement: Pull Shark

Achievements

Achievement: Arctic Code Vault ContributorAchievement: Pull Shark

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@Neubias-WG5

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  1. Scott-Lab-QBI/Scholz_et_al_2025_DLC-SLEAP_Analysis Scott-Lab-QBI/Scholz_et_al_2025_DLC-SLEAP_Analysis Public

    MATLAB and Python post DLC/SLEAP tracking analysis

    Jupyter Notebook

  2. Scott-Lab-QBI/zf_tracking_networks Scott-Lab-QBI/zf_tracking_networks Public

    DeepLabCut and SLEAP pre-trained pose estimation networks for zebrafish larvae

    Jupyter Notebook 4

  3. gxl2swc gxl2swc Public

    repository that shows the learning curve and the final result of a python script that reads a gxl file and converts into .swc format

    Python

  4. Hypha_WMTS Hypha_WMTS Public

    Implementations of the hyphal growth model of Balmant et al., PLoS One, 10(3), 2015.

    MATLAB 1

  5. swc_node_sorter swc_node_sorter Public

    gets .swc files and sort its node list correctly in order to be accepted by DiademMetric.jar for score calculation

    Python

  6. swc_metrics swc_metrics Public

    set of filament tracing metric computation utilities (for .swc files)

    Python 1