Testing and CI integration for LyoPronto from SECQUOIA#6

Closed

bernalde wants to merge 61 commits intoLyoHUB:mainfrom

Commits on Oct 3, 2025

Commits on Oct 29, 2025

Add conda environment and modern Python packaging
bernalde
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Fix unit conversion: output fraction (0-1) not percentage (0-100)
bernalde
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Fix edge case handling in design_space for empty arrays
bernalde
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Add missing T_pr_crit parameter to product test fixtures
bernalde
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Update tests for fraction format (0-1) instead of percentage (0-100)
bernalde
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Fix coverage test expectations for realistic optimizer behavior
bernalde
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Add example_optimizer.py with run_optimizer_example function
bernalde
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Restore legacy example scripts from git history
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Enable parallel testing with pytest-xdist for 4x speedup
bernalde
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Populate requirements-dev.txt with development dependencies
bernalde
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Update .gitignore for Python build artifacts and restore test data
bernalde
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Fix percentage format in remaining test assertions
bernalde
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Restore test files from testing-infrastructure branch
bernalde
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Merge dev-pyomo: Fix critical unit conversion bug and expand test suite
bernalde
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Fix CI: Ensure setuptools is installed before package installation
bernalde
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Address PR review: Replace magic numbers with named constants
bernalde
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Fix ModuleNotFoundError: Move assert_physically_reasonable_output to test_helpers
bernalde
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Fix test_helpers: Allow last time step to be repeated
bernalde
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Address PR review comments: add constants and clarify edge cases
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Fix spacing inconsistencies in multiple files
bernalde
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Fix remaining spacing inconsistencies in opt_Pch, design_space, and freezing
bernalde
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Standardize all unit comments to use brackets [unit]
bernalde
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Implement three-tier testing strategy to reduce CI time
bernalde
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Update lyopronto/freezing.py

bernalde
and
Copilot
authored
Update inconsistent unit
bernalde
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Refactor length checks to use .size for numpy arrays in example_freezing.py, design_space.py, and test files
bernalde
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Add centralized CI version configuration and update workflows to use dynamic Python version
bernalde
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Refactor GitHub Actions workflows to streamline checkout steps and improve CI efficiency
bernalde
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Fix formatting of comments for product resistance and sublimation flux calculations
bernalde
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Remove unnecessary files
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Update CI workflows to reference centralized Python version configuration
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Update documentation to standardize temperature and pressure units across examples and instructions
bernalde
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Refactor README to streamline test organization and improve clarity on running tests and CI/CD integration
bernalde
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Fix unit formatting for equipment capability coefficients in test files
bernalde
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Standardize time and pressure unit formatting across documentation and test files
bernalde
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Enhance CONTRIBUTING and documentation with detailed CI/CD testing guidelines and contributor checklist
bernalde
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Commits on Oct 30, 2025

Standardize unit formatting in mass balance tests for clarity
bernalde
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Commits on Nov 13, 2025

Merge pull request #1 from SECQUOIA:feature/testing-infrastructure
bernalde
authored

Commits on Nov 24, 2025

Commits on Feb 4, 2026

Sync with upstream LyoHUB/LyoPRONTO
bernalde
committed

Commits on Mar 2, 2026

Commits on Mar 3, 2026