Fitting stochastic epidemic model using the integration of gene genealogies and other source of data.
Before installing the package, you need to install ape package and phylodyn package. If you have problem installing phylodyn package, see phylodyn for more details.
install.packages("ape")
install_github("mdkarcher/phylodyn")
Are installing the prerequisite pacakges, run the following code to install phyloInt by running
devtools::install_github("MingweiWilliamTang/phyloInt")