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Use the simde header library for non-x86 compatibility #8

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3 changes: 3 additions & 0 deletions .gitmodules
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Original file line number Diff line number Diff line change
@@ -0,0 +1,3 @@
[submodule "src/simde"]
path = src/simde
url = https://github.com/nemequ/simde-no-tests
2 changes: 1 addition & 1 deletion CMakeLists.txt
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Expand Up @@ -37,7 +37,7 @@ if (debug)
set (LIBRARY_COMPILE_DEFINITIONS "${LIBRARY_COMPILE_DEFINITIONS} -g -p")
message("-- COMPILATION IN DEBUG MODE")
else()
set (LIBRARY_COMPILE_DEFINITIONS "${LIBRARY_COMPILE_DEFINITIONS} -O3 -funroll-loops -fomit-frame-pointer -msse3 ")
set (LIBRARY_COMPILE_DEFINITIONS "${LIBRARY_COMPILE_DEFINITIONS} -O3 -funroll-loops -fomit-frame-pointer")
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@mr-c mr-c Jan 30, 2021

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-msse3 can stay; we'll handle it different in the Debian package

# -DOBSFUCATION -DJNI_OBSFUCATION
endif()

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11 changes: 2 additions & 9 deletions src/algo/hits/gap/SmallGapHitIteratorSSE8.cpp
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Expand Up @@ -19,15 +19,8 @@

#include <algo/hits/gap/SmallGapHitIteratorSSE8.hpp>

#if __SSE3__
#include <pmmintrin.h>
#else
#if __SSE2__
#include <emmintrin.h>
#else
#warning error undefined __SSE3__ or __SSE2__
#endif
#endif
#define SIMDE_ENABLE_NATIVE_ALIASES
#include <simde/x86/sse3.h>

using namespace std;
using namespace misc;
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11 changes: 2 additions & 9 deletions src/algo/hits/ungap/UngapHitIteratorSSE16.cpp
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Expand Up @@ -21,15 +21,8 @@

#include <algo/hits/ungap/UngapHitIteratorSSE16.hpp>

#if __SSE3__
#include <pmmintrin.h>
#else
#if __SSE2__
#include <emmintrin.h>
#else
#warning error undefined __SSE3__ or __SSE2__
#endif
#endif
#define SIMDE_ENABLE_NATIVE_ALIASES
#include <simde/x86/sse3.h>

using namespace std;
using namespace misc;
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11 changes: 2 additions & 9 deletions src/algo/hits/ungap/UngapHitIteratorSSE8.cpp
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Expand Up @@ -20,15 +20,8 @@

#include <algo/hits/ungap/UngapHitIteratorSSE8.hpp>

#if __SSE3__
#include <pmmintrin.h>
#else
#if __SSE2__
#include <emmintrin.h>
#else
#warning error undefined __SSE3__ or __SSE2__
#endif
#endif
#define SIMDE_ENABLE_NATIVE_ALIASES
#include <simde/x86/sse3.h>

using namespace std;
using namespace misc;
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