MRseq - MR pulse sequences using Pulseq

MRseq is a collection of several useful functions, kernels and scripts for creating vendor-agnostic MR pulse sequences using the open-source Pulseq format.

• Source code: https://github.com/PTB-MR/mrseq
• Bug reports: https://github.com/PTB-MR/mrseq/issues
• Documentation: https://ptb-mr.github.io/mrseq/intro.html

Contributing

We are looking forward to your contributions via Pull-Requests.

Installation for developers

Prerequisites for Windows

Before installing MRseq with development dependencies on Windows, you need:

1. Visual Studio Build Tools: The MRzeroCore dependency requires Rust compilation with Microsoft Visual C++ linker

   • Download "Build Tools for Visual Studio 2022" from https://visualstudio.microsoft.com/downloads/
   • During installation, select the "C++ build tools" workload
   • Ensure "Windows 10/11 SDK" is included
   • This is required for compiling native Rust extensions

2. Rust toolchain (automatically installed by MRzeroCore if not present)

Installation steps

1. Clone the MRseq repository
2. Create/select a python environment
3. Install "MRseq" in editable mode including test dependencies: pip install -e ".[dev]"
4. Setup pre-commit hook: pre-commit install