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@RVanDamme
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codecov-io commented Jun 28, 2018

Codecov Report

Merging #9 into master will not change coverage.
The diff coverage is 0%.

Impacted file tree graph

@@           Coverage Diff           @@
##           master       #9   +/-   ##
=======================================
  Coverage   57.82%   57.82%           
=======================================
  Files          10       10           
  Lines         230      230           
=======================================
  Hits          133      133           
  Misses         97       97
Impacted Files Coverage Δ
capture/split.py 0% <ø> (ø) ⬆️
capture/jobs.py 21.73% <ø> (ø) ⬆️
capture/bam.py 100% <ø> (ø) ⬆️
capture/parse.py 95.55% <ø> (ø) ⬆️
capture/clean.py 86.66% <ø> (ø) ⬆️
capture/join.py 100% <ø> (ø) ⬆️
capture/run.py 0% <0%> (ø) ⬆️

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@HadrienG
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HadrienG commented Aug 1, 2018

Hi! Back from vacation now, sorry for making you wait.

I'm not sure I understand the conda install part. Does the user still need to install spades and canu separately ? As I understood the strength of conda is that we should be able to define both spades and canu as dependencies, and this have a command conda install capture-assebmler that installs everything.

Is that feasible?

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4 participants