Bump the python-packages group across 1 directory with 28 updates by dependabot[bot] · Pull Request #46 · TeamEpochGithub/woogle-maps

dependabot · 2024-09-01T19:15:58Z

Bumps the python-packages group with 28 updates in the / directory:

Package	From	To
nltk	`3.8.1`	`3.9.1`
dash	`2.17.0`	`2.17.1`
dash-extensions	`1.0.15`	`1.0.18`
dash-cytoscape	`1.0.0`	`1.0.2`
tqdm	`4.66.4`	`4.66.5`
fastparquet	`2024.2.0`	`2024.5.0`
transformers	`4.41.0`	`4.44.2`
sentence-transformers	`2.7.0`	`3.0.1`
pyarrow	`16.1.0`	`17.0.0`
epochalyst	`0.3.3`	`4.1.0`
hdbscan	`0.8.33`	`0.8.38.post1`
dask	`2024.5.1`	`2024.8.2`
notebook	`7.2.0`	`7.2.2`
rustworkx	`0.14.2`	`0.15.1`
polars	`0.20.26`	`1.6.0`
gensim	`4.3.2`	`4.3.3`
pypdf	`4.2.0`	`4.3.1`
scikit-learn	`1.4.2`	`1.5.1`
pulp	`2.8.0`	`2.9.0`
scipy	`1.12.0`	`1.13.1`
pre-commit	`3.7.1`	`3.8.0`
pytest	`8.2.1`	`8.3.2`
reportlab	`4.2.0`	`4.2.2`
sphinx	`7.2.6`	`7.3.7`
sphinx-autodoc-typehints	`2.0.1`	`2.3.0`
sphinxawesome-theme	`5.1.4`	`5.2.0`
myst-parser	`3.0.1`	`4.0.0`
pygit2	`1.14.1`	`1.15.1`

Updates nltk from 3.8.1 to 3.9.1

Changelog

Sourced from nltk's changelog.

Version 3.9.1 2024-08-19

Fixed bug that prevented wordnet from loading

Version 3.9 2024-08-18

Fix security vulnerability CVE-2024-39705 (breaking change)

Replace pickled models (punkt, chunker, taggers) by new pickle-free "_tab" packages

No longer sort WordNet synsets and relations (sort in calling function when required)

Add Python 3.12 support

Many other minor fixes

Thanks to the following contributors to 3.8.2: Tom Aarsen, Cat Lee Ball, Veralara Bernhard, Carlos Brandt, Konstantin Chernyshev, Michael Higgins, Eric Kafe, Vivek Kalyan, David Lukes, Rob Malouf, purificant, Alex Rudnick, Liling Tan, Akihiro Yamazaki.

Version 3.8.1 2023-01-02

Resolve RCE vulnerability in localhost WordNet Browser (#3100)

Remove unused tool scripts (#3099)

Resolve XSS vulnerability in localhost WordNet Browser (#3096)

Add Python 3.11 support (#3090)

Thanks to the following contributors to 3.8.1: Francis Bond, John Vandenberg, Tom Aarsen

Version 3.8 2022-12-12

Refactor dispersion plot (#3082)

Provide type hints for LazyCorpusLoader variables (#3081)

Throw warning when LanguageModel is initialized with incorrect vocabulary (#3080)

Fix WordNet's all_synsets() function (#3078)

Resolve TreebankWordDetokenizer inconsistency with end-of-string contractions (#3070)

Support both iso639-3 codes and BCP-47 language tags (#3060)

Avoid DeprecationWarning in Regexp tokenizer (#3055)

Fix many doctests, add doctests to CI (#3054, #3050, #3048)

Fix bool field not being read in VerbNet (#3044)

Greatly improve time efficiency of SyllableTokenizer when tokenizing numbers (#3042)

Fix encodings of Polish udhr corpus reader (#3038)

Allow TweetTokenizer to tokenize emoji flag sequences (#3034)

Prevent LazyModule from increasing the size of nltk.dict (#3033)

Fix CoreNLPServer non-default port issue (#3031)

Add "acion" suffix to the Spanish SnowballStemmer (#3030)

Allow loading WordNet without OMW (#3026)

Use input() in nltk.chat.chatbot() for Jupyter support (#3022)

Fix edit_distance_align() in distance.py (#3017)

Tackle performance and accuracy regression of sentence tokenizer since NLTK 3.6.6 (#3014)

Add the Iota operator to semantic logic (#3010)

Resolve critical errors in WordNet app (#3008)

Resolve critical error in CHILDES Corpus (#2998)

Make WordNet information_content() accept adjective satellites (#2995)

Add "strict=True" parameter to CoreNLP (#2993, #3043)

... (truncated)

Commits

aca78cb Bump version to 3.9.1
980f435 Merge branch 'develop' of https://github.com/nltk/nltk into develop
24936a2 Bump version to 3.9
04d6a55 Merge pull request #3145 from ekaf/hotfix-3072
4fb225b Merge pull request #3225 from ekaf/morphy
344164b Merge pull request #3307 from ekaf/https_download
f77e898 Ensure https download
c222897 Merge branch 'develop' of https://github.com/nltk/nltk into develop
34c3a4a Merge branch 'develop' of https://github.com/nltk/nltk into develop
253dd3a add black
Additional commits viewable in compare view

Updates dash from 2.17.0 to 2.17.1

Release notes

Sourced from dash's releases.

Dash v2.17.1

Fixed

#2860 Fix dcc.Loading to apply overlay_style only to the children and not the spinner. Fixes #2858

#2854 Fix dcc.Dropdown resetting empty values to null and triggering callbacks. Fixes #2850

#2859 Fix base patch operators. fixes #2855

#2856 Fix multiple consecutive calls with same id to set_props only keeping the last props. Fixes #2852

#2867 Fix clientside no output callback. Fixes #2866

#2876 Fix pattern matching in callback running argument. Fixes #2863

Changelog

Sourced from dash's changelog.

[2.17.1] - 2024-06-12

Fixed

#2860 Fix dcc.Loading to apply overlay_style only to the children and not the spinner. Fixes #2858

#2854 Fix dcc.Dropdown resetting empty values to null and triggering callbacks. Fixes #2850

#2859 Fix base patch operators. fixes #2855

#2856 Fix multiple consecutive calls with same id to set_props only keeping the last props. Fixes #2852

#2867 Fix clientside no output callback. Fixes #2866

#2876 Fix pattern matching in callback running argument. Fixes #2863

Commits

791c1eb Merge pull request #2884 from plotly/master-2.17.1
18f2f85 build
04e5e01 Master 2.17.1 build artifacts
d3ca2bf Merge branch 'dev' into master-2.17.1
553db47 Merge pull request #2883 from plotly/version-2.17.1
1753459 Version 2.17.1
efb9d32 Merge pull request #2876 from plotly/fix/pmc-side-updates
88a4c94 Set pch001 flaky
2be6047 Use lock instead of sleep
f7d5f2c Refactor functions to patternMatching.ts
Additional commits viewable in compare view

Updates dash-extensions from 1.0.15 to 1.0.18

Release notes

Sourced from dash-extensions's releases.

1.0.18

1.0.17

1.0.16

Changelog

Sourced from dash-extensions's changelog.

[1.0.18] - 15-07-24

Changed

Fix bug in BlockingCallbackTransform which occurred when a multi-output was targeted (i.e. using the ALL wildcard)

[1.0.17] - 28-06-24

Added

Improve the stability of the serialization transforms (BaseModelTransform, and DataclassTransform) by adding support for None, str and dict types

Add the option to send objects to the captureKeys property of the Keyboard component to enable more specific filtering

Add streaming capabilities to the SSE component

[1.0.16] - 05-28-24

Added

Add new SSE component, which can receive (and buffer) server sent events such the output from an LLM.

Add new LoadingTransform, which makes it easy to re-use a single (full screen) loading component across the app.

Add new BaseModelTransform, which automates serialization/deserialization of Pydantic BaseModel objects.

Commits

59a2443 Merge pull request #342 from emilhe/blocking_callback_wildcard
8d38b01 Preparing 1.0.18 release
4a460a1 Merge pull request #338 from emilhe/dependabot/pip/certifi-2024.7.4
aa73873 Merge pull request #339 from emilhe/dependabot/pip/zipp-3.19.1
0e922fa Bump zipp from 3.18.2 to 3.19.1
4bbf270 Bump certifi from 2023.11.17 to 2024.7.4
8a9937c Preparing 1.0.17 release
09a6ef8 Preparing 1.0.17 release
56e58e3 Merge pull request #335 from emilhe/1.0.17
45a91c1 Merge pull request #336 from emilhe/serialization2
Additional commits viewable in compare view

Updates dash-cytoscape from 1.0.0 to 1.0.2

Release notes

Sourced from dash-cytoscape's releases.

v1.0.1

Added

Expose CyLeaflet subcomponent IDs + Add additional documentation of CyLeaflet design by @emilykl in plotly/dash-cytoscape#211

Fixed

#205 Fixed updating maxZoom via callback in CyLeaflet AIO component by @Farkites.

#207 Allow access to updated lat/lon when Cytoscape nodes in CyLeaflet AIO component are modified via UI by @Farkites.

#208 Allow updating Cytoscape elements in CyLeaflet AIO component via callback by @Farkites.

#210 Performace improvement: added debounce to update elements event by @Farkites.

#212 Added call to cy.resize to fix mouse position mismatch on tapstart event by @Farkites.

Commits

See full diff in compare view

Updates tqdm from 4.66.4 to 4.66.5

Release notes

Sourced from tqdm's releases.

tqdm v4.66.5 stable

support ncols auto-detection on FreeBSD (#1602 <- casperdcl/git-fame#98)

fix Python 3.13 CLI (#1594 <- #1585)

fix Python 3.13 tests (#1595 <- python/cpython#117536)

misc framework updates (#1602)

add official Python 3.12 support

bump deps (NiklasRosenstein/pydoc-markdown#329, tikitu/jsmin#44)

Commits

951a2ba Merge pull request #1595 from hroncok/py3.13-await-aclose
2fbad6a Avoid Python 3.13+ RuntimeWarning: coroutine method 'aclose' of 'acount' was ...
0254345 Merge pull request #1594 from mgorny/py313-docstring
43230f6 slight lint
5ba6595 cli: Fix docstring processing with Python 3.13+
448946a Merge pull request #1602 from tqdm/devel
46cd395 add py3.12 support
d8ac656 ncols: support FreeBSD
4f66276 bump deps & linters
54796cc docs: bump versions
See full diff in compare view

Updates fastparquet from 2024.2.0 to 2024.5.0

Commits

1891a4a try again
e9e160c syntax
dd32baf wheel skip
f020179 update for np2 release
bb00f37 Use np.int64 type for day to nanosecond conversion (NEP50) (#922)
ec26733 Allow zoneinfo objects (#916)
See full diff in compare view

Updates transformers from 4.41.0 to 4.44.2

Release notes

Sourced from transformers's releases.

Release v4.44.2

Patch release v4.44.2, mostly 2 regressions that were not caught for Jamba and for processors!

Fix: Jamba cache fails to use torch.nn.module (#32894) Authored by @xgal

Fix: No need to dtype A in Jamba (#32924) @xgal

Fix: Regression on Processor.save_pretrained caused by #31691 (#32921) Authored by @leloykun

Patch release v4.44.1

Here are the different fixes, mostly Gemma2 context length, nits here and there, and generation issues

is_torchdynamo_compiling -- cast a wide exception net (#32476) by @gante

Revert "fixes to properly shard FSDP across cpu and meta for cpu_effcient_loading for prequantized 4bit (#32276)" (#32477) by @gante and @matthewdouglas

Gemma2: fix FA2 generation (#32553) by @zucchini-nlp

Fix: FA2 with packed training (#32487) by @zucchini-nlp

Fix sliding window attention used in Gemma2FlashAttention2 (#32522) by @brcps12

Automatically add transformers tag to the modelcard (#32623) by @LysandreJik

add back the position ids (#32554) by @ArthurZucker

Use head_dim if in config for RoPE (#32495) @suiyoubi @ArthurZucker

Revert PR 32299, flag users when Zero-3 was missed (#32851) by @muellerzr

fix multi-gpu with static cache (#32543) by @SunMarc

Reduce the error log when using core models that need their weights r… (#32656) by @muellerzr

Fix VLM generation issues (#32836) by @zucchini-nlp

Fix generate with inputs_embeds as input (#32493) (this PR has some cherry-pick)

Full Changelog: huggingface/transformers@v4.44.0...v4.44.1

Release v4.44.0: End to end compile generation!!! Gemma2 (with assisted decoding), Codestral (Mistral for code), Nemotron, Efficient SFT training, CPU Offloaded KVCache, torch export for static cache

This release comes a bit early in our cycle because we wanted to ship important and requested models along with improved performances for everyone!

All of these are included with examples in the awesome https://github.com/huggingface/local-gemma repository! 🎈 We tried to share examples of what is now possible with all the shipped features! Kudos to @gante, @sanchit-gandhi and @xenova

💥 End-to-end generation compile

Generate: end-to-end compilation #30788 by @gante: model.generate now supports compiling! There are a few limitations, but here is a small snippet:
from transformers import AutoModelForCausalLM, AutoTokenizer
import torch
import copy
model = AutoModelForCausalLM.from_pretrained(
"meta-llama/Meta-Llama-3.1-8B", torch_dtype=torch.bfloat16, device_map="auto"
)
tokenizer = AutoTokenizer.from_pretrained("meta-llama/Meta-Llama-3.1-8B")
compile generate
compiled_generate = torch.compile(model.generate, fullgraph=True, mode="reduce-overhead")
compiled generate does NOT accept parameterization except a) model inputs b) a generation config
generation_config = copy.deepcopy(model.generation_config)
</tr></table>

... (truncated)

Commits

1748902 v4.44.2
6845144 Fix regression on Processor.save_pretrained caused by #31691 (#32921)
3d8cba8 fix: no need to dtype A in jamba (#32924)
c1df7f8 fix: jamba cache fails to use torch.nn.module (#32894)
ca56cd7 v4.44.1
6e931e1 Gemma2: fix FA2 generation (#32553)
74f57df Fix generate with inputs_embeds as input (#32493)
084fe2e Merge branch 'v4.44-release' of github.com:huggingface/transformers into v4.4...
fff9be1 Reduce the error log when using core models that need their weights renamed, ...
4fd0f48 Fix VLM generation issues (#32836)
Additional commits viewable in compare view

Updates sentence-transformers from 2.7.0 to 3.0.1

Release notes

Sourced from sentence-transformers's releases.

v3.0.1 - Patch introducing new Trainer features, model card improvements and evaluator fixes

This patch release introduces some improvements for the SentenceTransformerTrainer, as well as some updates for the automatic model card generation. It also patches some minor evaluator bugs and a bug with MatryoshkaLoss. Lastly, every single Sentence Transformer model can now be saved and loaded with the safer model.safetensors files.

Install this version with
# Full installation:
pip install sentence-transformers[train]==3.0.1
Inference only:
pip install sentence-transformers==3.0.1
SentenceTransformerTrainer improvements

Implement gradient checkpointing for lower memory usage during training (#2717)

Implement support for push_to_hub=True Training Argument, also implement trainer.push_to_hub(...) (#2718)

Model Cards

This patch release improves on the automatically generated model cards in several ways:

Your training datasets are now automatically linked if they're on Hugging Face (#2711)

A new generated_from_trainer tag is now also added (#2710)

The automatically included widget examples are now improved, especially for question-answering. Previously, the widget could give examples of comparing two questions with eachother (#2713)

If you save a model locally, then load it again and upload it, it would previously still show
...
# Download from the 🤗 Hub
model = SentenceTransformer("sentence_transformers_model_id")
...
This now gets replaced with your new model ID on Hugging Face (#2714)

The exact training dataset size is now included in the model metadata, rather than as a bucket of e.g. 1K<n<10K (#2728)

Evaluators fixes

The primary metric of evaluators in SequentialEvaluator would be ignored in the scores calculation (#2700)

Fix confusing print statement in TranslationEvaluator when using print_wrong_matches=True (#1894)

Fix bug that prevents you from customizing the primary_metric in InformationRetrievalEvaluator (#2701)

Allow passing a list of evaluators to the STTrainer rather than a SequentialEvaluator (#2717)

Losses fixes

Fix MatryoshkaLoss crash if the first dimension is not the biggest (#2719)

Security

Integrate safetensors with all modules, including Dense, LSTM, CNN, etc. to prevent needing pickled pytorch_model.bin anymore (#2722)

All changes

updating to evaluation_strategy by @higorsilvaa in UKPLab/sentence-transformers#2686

fix loss link by @Samoed in UKPLab/sentence-transformers#2690

Fix bug that restricts users from specifying custom primary_function in InformationRetrievalEvaluator by @hetulvp in UKPLab/sentence-transformers#2701

Fix a bug in SequentialEvaluator to use primary_metric if defined in evaluator. by @hetulvp in UKPLab/sentence-transformers#2700

[fix] Always override the originally saved version in the ST config by @tomaarsen in UKPLab/sentence-transformers#2709

[model cards] Also include HF datasets in the model card metadata by @tomaarsen in UKPLab/sentence-transformers#2711

... (truncated)

Commits

8a02e45 Merge branch 'master' into v3.0-release
f012ab3 typo: SentenceTransformersTrainingArguments -> SentenceTransformerTrainingArg...
d079878 Specify the exact dataset size as a tag, will be bucketized by HF eventually ...
6ea9903 [feat] Integrate safetensors with Dense, etc. modules too. (#2722)
8ded768 Merge pull request #2727 from tomaarsen/can_return_loss
d9c2b0c Merge pull request #2726 from tomaarsen/fix/no_evaluator
08b340b Set can_return_loss=True globally, instead of via the data collator
4d3e357 Fix edge case with evaluator being None
b5e98e1 Merge pull request #2724 from tomaarsen/improve_typing
936f283 Add py.typed to satify mypy (etc.) requirements
Additional commits viewable in compare view

Updates pyarrow from 16.1.0 to 17.0.0

Release notes

Sourced from pyarrow's releases.

Apache Arrow 17.0.0

Release Notes URL: https://arrow.apache.org/release/17.0.0.html

Apache Arrow 17.0.0 RC2

Release Notes: Release Candidate: 17.0.0 RC2

Apache Arrow 17.0.0 RC1

Release Notes: Release Candidate: 17.0.0 RC1

Apache Arrow 17.0.0 RC0

Release Notes: Release Candidate: 17.0.0 RC0

Commits

6a2e19a MINOR: [Release] Update versions for 17.0.0
1a2fff4 MINOR: [Release] Update .deb/.rpm changelogs for 17.0.0
9d4cccc MINOR: [Release] Update CHANGELOG.md for 17.0.0
bf75923 GH-43204: [CI][Packaging] Apply vcpkg patch to fix Thrift version (#43208)
e85767a GH-41541: [Go][Parquet] More fixes for writer performance regression (#42003)
5c69895 GH-43199: [CI][Packaging] dev/release/utils-create-release-tarball.sh should ...
12be569 GH-42149: [C++] Use FetchContent for bundled ORC (#43011)
58d5142 GH-43158: [Packaging] Use bundled nlohmann/json on AlmaLinux 8/CentOS Stream ...
56a9862 GH-41910: [Python] Add support for Pyodide (#37822)
14e4684 GH-43116: [C++][Compute] Mark KeyCompare.CompareColumnsToRowsLarge as large m...
Additional commits viewable in compare view

Updates epochalyst from 0.3.3 to 4.1.0

Release notes

Sourced from epochalyst's releases.

v4.1.0

Improvements

General

Make numpy a required dependency (not optional)

CI/CD

Configure pre-commit.ci to cache environments

Dependabot merges to version branch workflow

Torch Trainer

Unprivatise functions

Support for mixed precision models

Updated logging messages

Support for custom dataset input

Data

New dataset that can take training pipeline

New data class based on enum retrieval

Cacher

Reduced complexity

Paths are now Path instead of str

v4.0.0

Improvements

General

Shorten import path lengths

Add default logger

Setup dependabot to manage dependencies

Deploy documentation on GitHub Pages

CI/CD

Only run tests on python version 3.10 every PR and on every version for release PRs

Documentation

Add optional dependencies description to README.md

TIMM

Refactor class to include

Torch Trainer

Add ONNX/Openvino compile option to trainer

Augmentations

Add BirdCLEF audio augmentations

Bug Fixes

General

Fix PyPi logo

... (truncated)

Commits

1efaf12 Merge pull request #246 from TeamEpochGithub/v4.1.0
9081019 Reduce cyclomatic complexity of caching (#244)
fcccd49 Update log message for inference on loader (#243)
627fad5 Add custom dataset capability to torch trainer (#242)
35729c2 Add Conv1dBnRelu block (#241)
ae8572d Add new action and update dependabot (#240)
e800927 Remove numpy as an optional dependency (#238)
641a70e Add mixed precision to torch trainer (#237)
dfe1436 Add dataset that can take a training pipeline (#236)
d50db68 Merge pull request #229 from TeamEpochGithub/180-ref-unprivatise-functions-in...
Additional commits viewable in compare view

Updates hdbscan from 0.8.33 to 0.8.38.post1

Release notes

Sourced from hdbscan's releases.

release-0.8.38

The major change here is the addition of Jelmer Bot's branch detection which allows long flares/branches to be separated into distinct clusters. This is a fairly major advance and should be useful for a number of important use cases.

What's Changed

MAINT: Support NumPy 2 and build Python 3.12 wheels by @seberg in scikit-learn-contrib/hdbscan#644

Remove cython from install requires by @trxcllnt in scikit-learn-contrib/hdbscan#624

Modify description of min_samples by @chenxinye in scikit-learn-contrib/hdbscan#620

Add branch detection functionality by @JelmerBot in scikit-learn-contrib/hdbscan#648

Update _hdbscan_tree.pyx by @lmcinnes in scikit-learn-contrib/hdbscan#649

New Contributors

@seberg made their first contribution in scikit-learn-contrib/hdbscan#644

@trxcllnt made their first contribution in scikit-learn-contrib/hdbscan#624

@JelmerBot made their first contribution in scikit-learn-contrib/hdbscan#648

Full Changelog: scikit-learn-contrib/hdbscan@release-0.8.37...release-0.8.38

release-0.8.37

Pin numpy<2 for now since this breaks builds.

release-0.8.36

Full Changelog: scikit-learn-contrib/hdbscan@release-0.8.35...release-0.8.36

release-0.8.35

What's Changed

Update so it will compile with numpy 2.0 (hopefully)

Typo fix in docs/parameter_selection.rst by @Daniel-Mietchen in scikit-learn-contrib/hdbscan#632

correct typo in variable declaration by @cearlefraym in scikit-learn-contrib/hdbscan#635

New Contributors

@Daniel-Mietchen made their first contribution in scikit-learn-contrib/hdbscan#632

@cearlefraym made their first contribution in scikit-learn-contrib/hdbscan#635

Full Changelog: scikit-learn-contrib/hdbscan@release-0.8.34-rc1...release-0.8.35

0.8.34-rc1

What's Changed

Update validity.py by @armenbod in scikit-learn-contrib/hdbscan#580

Wheel publish github action by @Rhaedonius in scikit-learn-contrib/hdbscan#604

Build platform dependent wheel files by @gclendenning in scikit-learn-contrib/hdbscan#606

Fixed DeprecationWarning in hdbscan/hdbscan_.py by @gerald-ftk in scikit-learn-contrib/hdbscan#612

Add .readthedocs.yaml to fix failing docs build issue. by @chenxinye in scikit-learn-contrib/hdbscan#619

New Contributors

@armenbod made their first contribution in scikit-learn-contrib/hdbscan#580

@gerald-ftk made their first contribution in scikit-learn-contrib/hdbscan#612

@chenxinye made their first contribution in scikit-learn-contrib/hdbscan#619

Full Changelog: scikit-learn-contrib/hdbscan@0.8.33...release-0.8.34-rc1

Commits

See full diff in compare view

Updates dask from 2024.5.1 to 2024.8.2

Release notes

Sourced from dask's releases.

2024.8.2

Changes

Release 2024.8.2 @jrbourbeau (#11359)

Add changelor entries for shuffle, vindex and blockwise_reshape @phofl (#11350)

Ensure persisted collections are released without GC @fjetter (#11348)

Update zoom link for dask meeting @scharlottej13 (#11357)

Add more docstring examples for normalize\_chunks @Illviljan (#11271)

Choose automatically between tasks-based and p2p rechunking @hendrikmakait (#11337)

Implement blockwise reshape @phofl (#11328)

Make rechunking in shuffle more intelligent to distribute unevenly if necessary @phofl (#11326)

Increase visibility of GPU CI updates @charlesbluca (#11345)

Update numpy and pyarrow versions in install docs @jrbourbeau (#11340)

Fixup dask and distributed dependencies @phofl (#11338)

Bump numpy>=1.24 and pyarrow>=14.0.1 minimum versions @jrbourbeau (#11331)

Add crick back to Python 3.11+ CI builds @jrbourbeau (#11335)

Preserve chunksizes in vindex @phofl (#11330)

Fix dask.array.fft mismatch with Numpy's interface (add support for norm argument) @joanrue (#10665)

Pass additional parameters to rechunk_p2p @hendrikmakait (#11319)

Fix docstring formatting for map_overlap @Tao-VanJS (#11332)

Fix NumPy overflowing for prod on 2.0 @phofl (#11327)

tensordot: ensure axes are positive / add tests for negative axes @joanrue (#10812)

Fix map_overlap with new_axis @dstansby (#11128)

See the Changelog for more information.

2024.8.1

Changes

Ensure pickle does not change tokens @fjetter (#11320)

Add changelog entry for reshape and ordering improvements @phofl (#11324)

Rename chunksize-tolerance option @phofl (#11317)

Upgrade gpuCI and fix Dask Array failures with "cupy" backend @rjzamora (#11309)

Implement automatic rechunking for shuffle @phofl (#11311)

Ensure we test against numpy 2 in CI @jrbourbeau (#11182)

Revert "Test ordering on distributed scheduler (#11310)" @fjetter (#11321)

Test ordering on distributed scheduler @fjetter (#11310)

Add tests to cover more cases of new reshape implementation @phofl (#11313)

order: Choose better target for branches with multiple leaf nodes @phofl (#11303)

order: ensure runnable tasks are certainly runnable @fjetter (#11305)

Fix upstream numpy build @phofl (#11304)

Make shuffle a no-op if possible @phofl (#11291)

Keep chunksize consistent in reshape @phofl (#11273)

Enable slicing with only one unknonw chunk @phofl (#11301)

Link to dask vs spark benchmarks on dask docs @scharlottej13 (#11289)

Fix slicing for masked arrays @phofl (#11300)

array: fix asarray for array input with dtype @lucascolley (#11288)

array: add constants @lucascolley (#11287)

Ignore typing of return value @phofl (#11286)

Remove autom...
Description has been truncated

Bumps the python-packages group with 28 updates in the / directory: | Package | From | To | | --- | --- | --- | | [nltk](https://github.com/nltk/nltk) | `3.8.1` | `3.9.1` | | [dash](https://github.com/plotly/dash) | `2.17.0` | `2.17.1` | | [dash-extensions](https://github.com/thedirtyfew/dash-extensions) | `1.0.15` | `1.0.18` | | [dash-cytoscape](https://github.com/plotly/dash-cytoscape) | `1.0.0` | `1.0.2` | | [tqdm](https://github.com/tqdm/tqdm) | `4.66.4` | `4.66.5` | | [fastparquet](https://github.com/dask/fastparquet) | `2024.2.0` | `2024.5.0` | | [transformers](https://github.com/huggingface/transformers) | `4.41.0` | `4.44.2` | | [sentence-transformers](https://github.com/UKPLab/sentence-transformers) | `2.7.0` | `3.0.1` | | [pyarrow](https://github.com/apache/arrow) | `16.1.0` | `17.0.0` | | [epochalyst](https://github.com/TeamEpochGithub/epochalyst) | `0.3.3` | `4.1.0` | | [hdbscan](https://github.com/scikit-learn-contrib/hdbscan) | `0.8.33` | `0.8.38.post1` | | [dask](https://github.com/dask/dask) | `2024.5.1` | `2024.8.2` | | [notebook](https://github.com/jupyter/notebook) | `7.2.0` | `7.2.2` | | [rustworkx](https://github.com/Qiskit/rustworkx) | `0.14.2` | `0.15.1` | | [polars](https://github.com/pola-rs/polars) | `0.20.26` | `1.6.0` | | [gensim](https://github.com/RaRe-Technologies/gensim) | `4.3.2` | `4.3.3` | | [pypdf](https://github.com/py-pdf/pypdf) | `4.2.0` | `4.3.1` | | [scikit-learn](https://github.com/scikit-learn/scikit-learn) | `1.4.2` | `1.5.1` | | [pulp](https://github.com/coin-or/pulp) | `2.8.0` | `2.9.0` | | [scipy](https://github.com/scipy/scipy) | `1.12.0` | `1.13.1` | | [pre-commit](https://github.com/pre-commit/pre-commit) | `3.7.1` | `3.8.0` | | [pytest](https://github.com/pytest-dev/pytest) | `8.2.1` | `8.3.2` | | [reportlab](https://www.reportlab.com/) | `4.2.0` | `4.2.2` | | [sphinx](https://github.com/sphinx-doc/sphinx) | `7.2.6` | `7.3.7` | | [sphinx-autodoc-typehints](https://github.com/tox-dev/sphinx-autodoc-typehints) | `2.0.1` | `2.3.0` | | [sphinxawesome-theme](https://github.com/kai687/sphinxawesome-theme) | `5.1.4` | `5.2.0` | | [myst-parser](https://github.com/executablebooks/MyST-Parser) | `3.0.1` | `4.0.0` | | [pygit2](https://github.com/libgit2/pygit2) | `1.14.1` | `1.15.1` | Updates `nltk` from 3.8.1 to 3.9.1 - [Changelog](https://github.com/nltk/nltk/blob/develop/ChangeLog) - [Commits](nltk/nltk@3.8.1...3.9.1) Updates `dash` from 2.17.0 to 2.17.1 - [Release notes](https://github.com/plotly/dash/releases) - [Changelog](https://github.com/plotly/dash/blob/dev/CHANGELOG.md) - [Commits](plotly/dash@v2.17.0...v2.17.1) Updates `dash-extensions` from 1.0.15 to 1.0.18 - [Release notes](https://github.com/thedirtyfew/dash-extensions/releases) - [Changelog](https://github.com/emilhe/dash-extensions/blob/master/CHANGELOG.md) - [Commits](emilhe/dash-extensions@1.0.15...1.0.18) Updates `dash-cytoscape` from 1.0.0 to 1.0.2 - [Release notes](https://github.com/plotly/dash-cytoscape/releases) - [Commits](plotly/dash-cytoscape@v1.0.0...v1.0.2) Updates `tqdm` from 4.66.4 to 4.66.5 - [Release notes](https://github.com/tqdm/tqdm/releases) - [Commits](tqdm/tqdm@v4.66.4...v4.66.5) Updates `fastparquet` from 2024.2.0 to 2024.5.0 - [Commits](dask/fastparquet@2024.2.0...2024.5.0) Updates `transformers` from 4.41.0 to 4.44.2 - [Release notes](https://github.com/huggingface/transformers/releases) - [Commits](huggingface/transformers@v4.41.0...v4.44.2) Updates `sentence-transformers` from 2.7.0 to 3.0.1 - [Release notes](https://github.com/UKPLab/sentence-transformers/releases) - [Commits](huggingface/sentence-transformers@v2.7.0...v3.0.1) Updates `pyarrow` from 16.1.0 to 17.0.0 - [Release notes](https://github.com/apache/arrow/releases) - [Commits](apache/arrow@r-16.1.0...go/v17.0.0) Updates `epochalyst` from 0.3.3 to 4.1.0 - [Release notes](https://github.com/TeamEpochGithub/epochalyst/releases) - [Commits](TeamEpochGithub/epochlib@v0.3.3...v4.1.0) Updates `hdbscan` from 0.8.33 to 0.8.38.post1 - [Release notes](https://github.com/scikit-learn-contrib/hdbscan/releases) - [Commits](https://github.com/scikit-learn-contrib/hdbscan/commits) Updates `dask` from 2024.5.1 to 2024.8.2 - [Release notes](https://github.com/dask/dask/releases) - [Changelog](https://github.com/dask/dask/blob/main/docs/release-procedure.md) - [Commits](dask/dask@2024.5.1...2024.8.2) Updates `notebook` from 7.2.0 to 7.2.2 - [Release notes](https://github.com/jupyter/notebook/releases) - [Changelog](https://github.com/jupyter/notebook/blob/@jupyter-notebook/tree@7.2.2/CHANGELOG.md) - [Commits](https://github.com/jupyter/notebook/compare/@jupyter-notebook/tree@7.2.0...@jupyter-notebook/tree@7.2.2) Updates `rustworkx` from 0.14.2 to 0.15.1 - [Release notes](https://github.com/Qiskit/rustworkx/releases) - [Commits](Qiskit/rustworkx@0.14.2...0.15.1) Updates `polars` from 0.20.26 to 1.6.0 - [Release notes](https://github.com/pola-rs/polars/releases) - [Commits](pola-rs/polars@py-0.20.26...py-1.6.0) Updates `gensim` from 4.3.2 to 4.3.3 - [Release notes](https://github.com/RaRe-Technologies/gensim/releases) - [Changelog](https://github.com/piskvorky/gensim/blob/develop/CHANGELOG.md) - [Commits](piskvorky/gensim@4.3.2...4.3.3) Updates `pypdf` from 4.2.0 to 4.3.1 - [Release notes](https://github.com/py-pdf/pypdf/releases) - [Changelog](https://github.com/py-pdf/pypdf/blob/main/CHANGELOG.md) - [Commits](py-pdf/pypdf@4.2.0...4.3.1) Updates `scikit-learn` from 1.4.2 to 1.5.1 - [Release notes](https://github.com/scikit-learn/scikit-learn/releases) - [Commits](scikit-learn/scikit-learn@1.4.2...1.5.1) Updates `pulp` from 2.8.0 to 2.9.0 - [Release notes](https://github.com/coin-or/pulp/releases) - [Changelog](https://github.com/coin-or/pulp/blob/master/HISTORY) - [Commits](coin-or/pulp@2.8.0...2.9.0) Updates `scipy` from 1.12.0 to 1.13.1 - [Release notes](https://github.com/scipy/scipy/releases) - [Commits](scipy/scipy@v1.12.0...v1.13.1) Updates `pre-commit` from 3.7.1 to 3.8.0 - [Release notes](https://github.com/pre-commit/pre-commit/releases) - [Changelog](https://github.com/pre-commit/pre-commit/blob/main/CHANGELOG.md) - [Commits](pre-commit/pre-commit@v3.7.1...v3.8.0) Updates `pytest` from 8.2.1 to 8.3.2 - [Release notes](https://github.com/pytest-dev/pytest/releases) - [Changelog](https://github.com/pytest-dev/pytest/blob/main/CHANGELOG.rst) - [Commits](pytest-dev/pytest@8.2.1...8.3.2) Updates `reportlab` from 4.2.0 to 4.2.2 Updates `sphinx` from 7.2.6 to 7.3.7 - [Release notes](https://github.com/sphinx-doc/sphinx/releases) - [Changelog](https://github.com/sphinx-doc/sphinx/blob/v7.3.7/CHANGES.rst) - [Commits](sphinx-doc/sphinx@v7.2.6...v7.3.7) Updates `sphinx-autodoc-typehints` from 2.0.1 to 2.3.0 - [Release notes](https://github.com/tox-dev/sphinx-autodoc-typehints/releases) - [Changelog](https://github.com/tox-dev/sphinx-autodoc-typehints/blob/main/CHANGELOG.md) - [Commits](tox-dev/sphinx-autodoc-typehints@2.0.1...2.3.0) Updates `sphinxawesome-theme` from 5.1.4 to 5.2.0 - [Release notes](https://github.com/kai687/sphinxawesome-theme/releases) - [Commits](kai687/sphinxawesome-theme@5.1.4...5.2.0) Updates `myst-parser` from 3.0.1 to 4.0.0 - [Release notes](https://github.com/executablebooks/MyST-Parser/releases) - [Changelog](https://github.com/executablebooks/MyST-Parser/blob/master/CHANGELOG.md) - [Commits](executablebooks/MyST-Parser@v3.0.1...v4.0.0) Updates `pygit2` from 1.14.1 to 1.15.1 - [Changelog](https://github.com/libgit2/pygit2/blob/master/CHANGELOG.md) - [Commits](libgit2/pygit2@v1.14.1...v1.15.1) --- updated-dependencies: - dependency-name: nltk dependency-type: direct:production update-type: version-update:semver-minor dependency-group: python-packages - dependency-name: dash dependency-type: direct:production update-type: version-update:semver-patch dependency-group: python-packages - dependency-name: dash-extensions dependency-type: direct:production update-type: version-update:semver-patch dependency-group: python-packages - dependency-name: dash-cytoscape dependency-type: direct:production update-type: version-update:semver-patch dependency-group: python-packages - dependency-name: tqdm dependency-type: direct:production update-type: version-update:semver-patch dependency-group: python-packages - dependency-name: fastparquet dependency-type: direct:production update-type: version-update:semver-minor dependency-group: python-packages - dependency-name: transformers dependency-type: direct:production update-type: version-update:semver-minor dependency-group: python-packages - dependency-name: sentence-transformers dependency-type: direct:production update-type: version-update:semver-major dependency-group: python-packages - dependency-name: pyarrow dependency-type: direct:production update-type: version-update:semver-major dependency-group: python-packages - dependency-name: epochalyst dependency-type: direct:production update-type: version-update:semver-major dependency-group: python-packages - dependency-name: hdbscan dependency-type: direct:production update-type: version-update:semver-patch dependency-group: python-packages - dependency-name: dask dependency-type: direct:production update-type: version-update:semver-minor dependency-group: python-packages - dependency-name: notebook dependency-type: direct:production update-type: version-update:semver-patch dependency-group: python-packages - dependency-name: rustworkx dependency-type: direct:production update-type: version-update:semver-minor dependency-group: python-packages - dependency-name: polars dependency-type: direct:production update-type: version-update:semver-major dependency-group: python-packages - dependency-name: gensim dependency-type: direct:production update-type: version-update:semver-patch dependency-group: python-packages - dependency-name: pypdf dependency-type: direct:production update-type: version-update:semver-minor dependency-group: python-packages - dependency-name: scikit-learn dependency-type: direct:production update-type: version-update:semver-minor dependency-group: python-packages - dependency-name: pulp dependency-type: direct:production update-type: version-update:semver-minor dependency-group: python-packages - dependency-name: scipy dependency-type: direct:production update-type: version-update:semver-minor dependency-group: python-packages - dependency-name: pre-commit dependency-type: direct:development update-type: version-update:semver-minor dependency-group: python-packages - dependency-name: pytest dependency-type: direct:development update-type: version-update:semver-minor dependency-group: python-packages - dependency-name: reportlab dependency-type: direct:development update-type: version-update:semver-patch dependency-group: python-packages - dependency-name: sphinx dependency-type: direct:production update-type: version-update:semver-minor dependency-group: python-packages - dependency-name: sphinx-autodoc-typehints dependency-type: direct:production update-type: version-update:semver-minor dependency-group: python-packages - dependency-name: sphinxawesome-theme dependency-type: direct:production update-type: version-update:semver-minor dependency-group: python-packages - dependency-name: myst-parser dependency-type: direct:production update-type: version-update:semver-major dependency-group: python-packages - dependency-name: pygit2 dependency-type: direct:production update-type: version-update:semver-minor dependency-group: python-packages ... Signed-off-by: dependabot[bot] <support@github.com>

for more information, see https://pre-commit.ci

dependabot bot requested a review from Jeffrey-Lim as a code owner September 1, 2024 19:15

dependabot bot added dependencies Pull requests that update a dependency file python Pull requests that update Python code labels Sep 1, 2024

[pre-commit.ci] auto fixes from pre-commit.com hooks

6488510

for more information, see https://pre-commit.ci

Provide feedback

Saved searches

Use saved searches to filter your results more quickly

Comments

Bump the python-packages group across 1 directory with 28 updates#46

Bump the python-packages group across 1 directory with 28 updates#46
dependabot[bot] wants to merge 2 commits intomainfrom
dependabot/pip/python-packages-8238eac2bd

dependabot bot commented on behalf of github Sep 1, 2024

Uh oh!

Reviewers

Assignees

Labels

Projects

Milestone

Development

Uh oh!

0 participants

Comments

Conversation

dependabot bot commented on behalf of github Sep 1, 2024

Dash v2.17.1

Fixed

[2.17.1] - 2024-06-12

Fixed

[1.0.18] - 15-07-24

Changed

[1.0.17] - 28-06-24

Added

[1.0.16] - 05-28-24

Added

v1.0.1

Added

Fixed

tqdm v4.66.5 stable

Release v4.44.2

Patch release v4.44.1

Here are the different fixes, mostly Gemma2 context length, nits here and there, and generation issues

Release v4.44.0: End to end compile generation!!! Gemma2 (with assisted decoding), Codestral (Mistral for code), Nemotron, Efficient SFT training, CPU Offloaded KVCache, torch export for static cache

💥 End-to-end generation compile

v3.0.1 - Patch introducing new Trainer features, model card improvements and evaluator fixes

SentenceTransformerTrainer improvements

Model Cards

Evaluators fixes

Losses fixes

Security

All changes

Apache Arrow 17.0.0

Apache Arrow 17.0.0 RC2

Apache Arrow 17.0.0 RC1

Apache Arrow 17.0.0 RC0

v4.1.0

Improvements

General

CI/CD

Torch Trainer

Data

Cacher

v4.0.0

Improvements

General

CI/CD

Documentation

TIMM

Torch Trainer

Augmentations

Bug Fixes

General

release-0.8.38

What's Changed

New Contributors

release-0.8.37

release-0.8.36

release-0.8.35

What's Changed

New Contributors

0.8.34-rc1

What's Changed

New Contributors

2024.8.2

Changes

2024.8.1

Changes

Uh oh!

Reviewers

Assignees

Labels

Projects

Milestone

Development

Uh oh!

0 participants