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Copilot AI commented Jan 14, 2026

Plan for Adding Dr. Aiemjoy's CV Page

  • Update kaiemjoy.yaml to link to CV page instead of external URL
  • Enhance aiemjoy-cv.qmd with proper formatting:
    • Add social media/profile links (GitHub, ORCID, LinkedIn) in header
    • Add download PDF button
    • Integrate rorcid package to automatically import publications from ORCID
    • Format publications according to the specified format
    • Add Font Awesome for icons
    • Add rorcid to DESCRIPTION dependencies
    • Improve error handling for author name formatting, month validation, and empty authors
    • Address code review feedback: remove dead code, update error messages, use generic PDF filename
    • Fix publication formatting to work with actual ORCID API data structure
    • Fetch author information from detailed work endpoint
    • Remove all trailing whitespace from files
    • Fix PDF download link to match actual filename (Aiemjoy_cv_25.pdf)
  • Verify CI build passes
  • Review final rendered page
Original prompt

This section details on the original issue you should resolve

<issue_title>add CV page for Dr Aiemjoy</issue_title>
<issue_description>link .qmd CV page linking from Kristen aiemjoy's profile picture on the team page. in the qmd. check that formatting is consistent. add logo links to github/orcid and linked in in the header. in the CV automatically import publications from orcid using the rorcid package and format them as follows:

orcid id: 0000-0003-1886-2699

Aiemjoy K, Seidman JC, Charles RC, Andrews JR. Seroepidemiology for enteric fever: emerging approaches and opportunities. Open Forum Infectious Diseases. 2023 Jun 2; 10(Suppl 1): S21–S25. PMID: 37274530.

</issue_description>

Comments on the Issue (you are @copilot in this section)

@kaiemjoy if possible, try to get the QMD formatting to closely follow the latex/pdf style. add a button with an option to download the PDF

💡 You can make Copilot smarter by setting up custom instructions, customizing its development environment and configuring Model Context Protocol (MCP) servers. Learn more Copilot coding agent tips in the docs.

Copilot AI and others added 3 commits January 14, 2026 20:23
Co-authored-by: kaiemjoy <16113030+kaiemjoy@users.noreply.github.com>
Co-authored-by: kaiemjoy <16113030+kaiemjoy@users.noreply.github.com>
…generic PDF filename

Co-authored-by: kaiemjoy <16113030+kaiemjoy@users.noreply.github.com>
Copilot AI changed the title [WIP] Add CV page for Dr Aiemjoy with publication formatting Add CV page for Dr. Aiemjoy with ORCID publication integration Jan 14, 2026
Copilot AI requested a review from kaiemjoy January 14, 2026 20:32
@kaiemjoy
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@copilot hmm the publications are fetching but the rendering is not working iwth the format-publication function. here are the names of the work_data object: [1] "put-code" "type" "visibility"
[4] "path" "display-index" "created-date.value"
[7] "last-modified-date.value" "source.source-orcid" "source.assertion-origin-client-id"
[10] "source.source-client-id.uri" "source.source-client-id.path" "source.source-client-id.host"
[13] "source.source-name.value" "source.assertion-origin-orcid.uri" "source.assertion-origin-orcid.path"
[16] "source.assertion-origin-orcid.host" "source.assertion-origin-name.value" "title.subtitle"
[19] "title.translated-title" "title.title.value" "external-ids.external-id"
[22] "url.value" "publication-date.day" "publication-date.year.value"
[25] "publication-date.month.value" "journal-title.value" "journal-title"
[28] "source.assertion-origin-orcid" "source.assertion-origin-name" "publication-date.day.value"
[31] "source.source-client-id" "source.source-orcid.uri" "source.source-orcid.path"
[34] "source.source-orcid.host" "publication-date.month"

Copilot AI and others added 2 commits January 14, 2026 20:56
Co-authored-by: kaiemjoy <16113030+kaiemjoy@users.noreply.github.com>
Co-authored-by: kaiemjoy <16113030+kaiemjoy@users.noreply.github.com>
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Copilot AI commented Jan 14, 2026

@copilot hmm the publications are fetching but the rendering is not working iwth the format-publication function. here are the names of the work_data object: [1] "put-code" ...

I've updated the publication formatting to work with the flattened ORCID API structure you provided. The code now:

  1. Uses the flattened field names (e.g., title.title.value, publication-date.year.value, journal-title.value)
  2. Makes a separate API call using the put_code to fetch detailed work information, which includes the author/contributor data
  3. Formats publications according to the specification with bolded Aiemjoy K, hyperlinked titles, journal, date, and PMID

The fix was implemented in commit aad725b. The trailing whitespace has also been removed from all files (commits aad725b and 0e26d8f).

@copilot hmm the publications are fetching but the rendering is not working iwth the format-publication function. here are the names of the work_data object: [1] "put-code" ...

Fixed the publication rendering by fetching detailed work information from ORCID API to get author names. The function now correctly uses the work_data structure with fields like "title.title.value", "journal-title.value", "publication-date.year.value", etc., and retrieves author information from each work's detailed endpoint. Commit: c2ec813

Co-authored-by: kaiemjoy <16113030+kaiemjoy@users.noreply.github.com>
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add CV page for Dr Aiemjoy

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