Update cluster_logfc.R and wmw_gsea.R for compatibility with R>=4.0.0#4
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svigneau wants to merge 2 commits intoarc85:masterfrom
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Update cluster_logfc.R and wmw_gsea.R for compatibility with R>=4.0.0#4svigneau wants to merge 2 commits intoarc85:masterfrom
svigneau wants to merge 2 commits intoarc85:masterfrom
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Updated for compatibility with R >4.0.0. Since R 4.0.0, matrices have two classes, "matrix" and "array", which leads to a "condition has length > 1" error when running `if (!class(expr.mat)=="dgCMatrix")`. The "inherits" or "is" functions should be used instead of "==" for checking the class (https://developer.r-project.org/Blog/public/2019/11/09/when-you-think-class.-think-again/index.html).
Updated for compatibility with R >4.0.0. Since R 4.0.0, matrices have two classes, "matrix" and "array", which leads to a "condition has length > 1" error when running `if (!class(expr.mat)=="matrix")`. The "inherits" or "is" functions should be used instead of "==" for checking the class (https://developer.r-project.org/Blog/public/2019/11/09/when-you-think-class.-think-again/index.html).
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Updated cluster_logfc.R and wmw_gsea.R for compatibility with R >4.0.0. Since R 4.0.0, matrices have two classes, "matrix" and "array", which leads to a "condition has length > 1" error when running, e.g.,
if (!class(expr.mat)=="dgCMatrix"). The "inherits" or "is" functions should be used instead of "==" for checking the class (https://developer.r-project.org/Blog/public/2019/11/09/when-you-think-class.-think-again/index.html).@svigneau