feat: dependency update and modernize#49
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atarashansky merged 11 commits intomasterfrom Dec 26, 2025
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- Remove outdated Travis CI config (Python 3.7/3.8) - Add GitHub Actions workflow for CI (Python 3.11/3.12) - Fix scatter() to only pass cmap when c is numeric data 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude <noreply@anthropic.com>
- Rename package from sam-algorithm to sc-sam - Update README with new pip install instructions - Remove Docker directory (outdated) - Remove anndata version checks (require >=0.10.0 now) - Remove redundant anndata imports 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude <noreply@anthropic.com>
🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude <noreply@anthropic.com>
Automatically publishes to PyPI when a GitHub release is created. Uses trusted publishing (OIDC) for secure authentication. 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude <noreply@anthropic.com>
- Add anndata import for read_h5ad - Fix exception chaining (B904) - Format code with ruff - Update ruff config to ignore pedantic rules 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude <noreply@anthropic.com>
🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude <noreply@anthropic.com>
🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude <noreply@anthropic.com>
🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude <noreply@anthropic.com>
🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude <noreply@anthropic.com>
🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude <noreply@anthropic.com>
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