SGPvalue

Source code for A BLAST from the past: revisiting blastp’s E-value

Demo

Please unzip the demo_new.tar.gz file and run the run_blastp.sh therein.

Requirements

Please make sure NCBI Blast is installed so that it can be properly called by our python wrapper.

Citation

Please cite our paper if you fine our data, model or code useful.

@article{lu:blast,
  title={{A BLAST from the past: revisiting blastp's E-value}},
  author={Y. Y. Lu and W. S. Noble and U. Keich},
  journal={bioRxiv},
  pages={2024--07},
  year={2024},
  publisher={Cold Spring Harbor Laboratory}
}