PHARE  

PHARE (Physiology Age Prediction) is a bioinformatics tool for predicting the immune age of samples from scRNA-seq data or bulk RNA-seq data.

Web Tool

We have developed a website that can be easily used. See https://xiazlab.org/phare for more information.

Quick start in python

Or start using PHARE directly from the code:

1. Create a python enviroment and install dependent packages: pip install -r requirements.txt

2. Run predict_one_sample.py to realize a prediction from scRNA-seq data.

3. Run predict_one_bulk_sample.py to try prediction from bulk RNA-seq data.