Update README.md for CLI accuracy and supported agents

[yacosta738]

Updated README.md to accurately reflect the current CLI implementation and supported flags. Minimal changes were applied to improve documentation accuracy for usage examples and command options.

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PR created automatically by Jules for task 1371813568656790508 started by @yacosta738

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[github-actions]

Hey there and thank you for opening this pull request!

We require pull request titles to follow the Conventional Commits specification and it looks like your proposed title needs to be adjusted.

Details:

No release type found in pull request title "Update README.md for CLI accuracy and supported agents". Add a prefix to indicate what kind of release this pull request corresponds to. For reference, see https://www.conventionalcommits.org/

Available types:
 - feat: A new feature
 - fix: A bug fix
 - docs: Documentation only changes
 - style: Changes that do not affect the meaning of the code (white-space, formatting, missing semi-colons, etc)
 - refactor: A code change that neither fixes a bug nor adds a feature
 - perf: A code change that improves performance
 - test: Adding missing tests or correcting existing tests
 - build: Changes that affect the build system or external dependencies (example scopes: gulp, broccoli, npm)
 - ci: Changes to our CI configuration files and scripts (example scopes: Travis, Circle, BrowserStack, SauceLabs)
 - chore: Other changes that don't modify src or test files
 - revert: Reverts a previous commit

[coderabbitai]

📝 Walkthrough

Summary by CodeRabbit

• Documentation
  • Enhanced CLI documentation with expanded initialization options, including --force flag support.
  • Added support for custom configuration paths and project targeting via --config and --path flags.
  • Improved status and doctor commands with --project-root and --json output options.
  • Consolidated skill management under a unified command structure with additional configuration flags.

Walkthrough

README.md's Usage section was expanded to document restructured CLI options, including new flags for configuration initialization (--force, --path), custom configuration application (--config), project-specific operations, and consolidated skill management commands with enhanced options (--project-root, --json).

Changes

Cohort / File(s)	Summary
Documentation Updates README.md	Expanded Usage section to reflect new and restructured CLI options including initialization with --force flag, configuration via --config, project-specific targeting with --path, enhanced status/doctor commands with --project-root and --json flags, and unified agentsync skill command structure.

Estimated code review effort

🎯 2 (Simple) | ⏱️ ~8 minutes

Poem

🐰 Hops with glee, our CLI's neat,
Commands unified, oh what a treat!
With --flags galore, the docs now gleam,
Configuration flows like a rabbit's dream! ✨

🚥 Pre-merge checks | ✅ 4

✅ Passed checks (4 passed)

Check name	Status	Explanation
Title check	✅ Passed	The title 'Update README.md for CLI accuracy and supported agents' is directly related to the changeset which updates the README.md to reflect current CLI implementation and supported flags.
Description check	✅ Passed	The description accurately explains that README.md was updated to reflect current CLI implementation and supported flags, which aligns with the actual changes made in the pull request.
Docstring Coverage	✅ Passed	No functions found in the changed files to evaluate docstring coverage. Skipping docstring coverage check.
Merge Conflict Detection	✅ Passed	✅ No merge conflicts detected when merging into main

_{✏️ Tip: You can configure your own custom pre-merge checks in the settings.}

✨ Finishing touches

🧪 Generate unit tests (beta)

• Create PR with unit tests
• Post copyable unit tests in a comment
• Commit unit tests in branch docs-readme-accuracy-update-1371813568656790508

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[github-actions]

✅ Contributor Report

User: @yacosta738
Status: Passed (12/13 metrics passed)

Metric	Description	Value	Threshold	Status
PR Merge Rate	PRs merged vs closed	89%	>= 30%	✅
Repo Quality	Repos with ≥100 stars	0	>= 0	✅
Positive Reactions	Positive reactions received	9	>= 1	✅
Negative Reactions	Negative reactions received	0	<= 5	✅
Account Age	GitHub account age	3032 days	>= 30 days	✅
Activity Consistency	Regular activity over time	108%	>= 0%	✅
Issue Engagement	Issues with community engagement	0	>= 0	✅
Code Reviews	Code reviews given to others	356	>= 0	✅
Merger Diversity	Unique maintainers who merged PRs	3	>= 0	✅
Repo History Merge Rate	Merge rate in this repo	0.8133333333333334	>= 0	✅
Repo History Min PRs	Previous PRs in this repo	79	>= 0	✅
Profile Completeness	Profile richness (bio, followers)	90	>= 0	✅
Suspicious Patterns	Spam-like activity detection	1	N/A	❌

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_{Contributor Report evaluates based on public GitHub activity. Analysis period: 2025-02-14 to 2026-02-14}