Fixes hellbelly/BS-Snper#10 #11
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Previously, only the last operation of the CIGAR string was recorded in record->cigar. This caused basecalls to be ignored and/or placed at the wrong reference position. This has now been corrected and the CIGAR string is recorded properly.
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Previously, only the last operation of the CIGAR string was recorded in
record->cigar.This caused basecalls to be ignored and/or placed at the wrong reference position.
The bug has now been corrected and the CIGAR string is recorded properly.
This fixes #10