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1. ATAC-Seq ATAC-Seq Public

   Comprehensive analysis pipeline for ATAC-seq data including QC, alignment, peak calling, annotation, motif analysis, and gene enrichment. Delivers key insights and reproducible results for chromati…

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2. cEpiReg cEpiReg Public

   Our comprehensive database integrates data from scRNA seq and sc-ATAC seq, identifying cis-regulatory elements (CREs) through comparison with ENCODE, Epimap, GWAS Catalog, and other datasets. By co…

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3. ChIP-Seq ChIP-Seq Public

   ChIP-seq analysis pipeline encompassing data processing, quality control, alignment, peak calling, annotation and motif analysis.

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4. RNA-Seq RNA-Seq Public template

   RNA-Seq analysis pipeline for investigating transcriptional changes during mammalian cardiac regeneration.

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