DM-50896: Fix click duplicate option warnings

[timj]

These warnings were added in click by pallets/click#2397

Checklist

• ran Jenkins
• added a release note for user-visible changes to doc/changes

[codecov]

Codecov Report

✅ All modified and coverable lines are covered by tests.
✅ Project coverage is 85.95%. Comparing base (44633bb) to head (3e5877f).
⚠️ Report is 6 commits behind head on main.
✅ All tests successful. No failed tests found.

Additional details and impacted files

@@            Coverage Diff             @@
##             main     #355      +/-   ##
==========================================
+ Coverage   85.91%   85.95%   +0.04%     
==========================================
  Files          44       44              
  Lines        2534     2542       +8     
  Branches      260      264       +4     
==========================================
+ Hits         2177     2185       +8     
  Misses        256      256              
  Partials      101      101              

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[MichelleGower]

Merge approved. I couldn't reproduce the problem with --help on the various subcommands like I can with current weekly. I also double checked that it doesn't happen with ctrl_bps in weekly.

I do find it a little confusing that pipeline_build_options does have a butler_config to skip but qgraph_options does not and line 216 explicitly calls butler_options. I think this is because with pipeline build the repo is optional (and it still works in a manual test). I don't have any suggestions on how to make it better though.