RNAkinet: Detect 5eu-modified reads directly from the raw nanopore sequencing signal to quantify RNA kinetics

Miscellaneous scripts for manipulating table files

A snakemake workflow that is intended to be consumed by other workflows allowing basecalling of Oxford Nanopore files with dorado

Package for the analysis of the nanopore read lengths, e.g. to calculate the significant differential transcript length.

A snakemake workflow that is intended to be consumed by other workflows allowing download of ENSEMBL reference files

Scripts for processing low-throughput molecular biology data

SQL-like query language for the SAM/BAM file format

Our first hackathon! Training for mRNA decay rates

Source code for manuscript "Senescence-specific translation dysregulation desensitizes cells to stress by inhibiting activation of the integrated stress response"