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Add blue channel text file output #3

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Add blue channel text file output #3

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7adc25c
Add blue channel text file output
mjthreesixfive Jul 27, 2016
145c299
Fixed accidental header
mjthreesixfive Jul 27, 2016
831c1ab
Fixed wrong command
mjthreesixfive Jul 27, 2016
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5 changes: 1 addition & 4 deletions nucleus-and-locus-tag-segmentation.ijm
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Original file line number Diff line number Diff line change
Expand Up @@ -69,7 +69,7 @@ for (i=0; i<list.length; i++){

// save the blue channel mask
saveAs("Tiff", bdir+w2+"-M1.tif");

saveAs("Text Image", bdir+w2+"-M1.txt");
//create a ROI from the binary image
run("Create Selection");
//measure selection
Expand Down Expand Up @@ -140,6 +140,3 @@ for (i=0; i<list.length; i++){
}
setBatchMode(false); //exit batch mode
print(dir1+" analysis finished");