⬆️ Update prek checks

.pre-commit-config.yaml

@@ -1,173 +1,164 @@
 # To run all pre-commit checks, use:
 #
-#     pre-commit run -a
+#     uvx prek run -a
 #
 # To install pre-commit hooks that run every time you commit:
 #
-#     pre-commit install
+#     uv tool install prek
+#     prek install
 #
 
 ci:
   autoupdate_commit_msg: "⬆️🪝 update pre-commit hooks"
-  autofix_commit_msg: "🎨 pre-commit fixes"
   autoupdate_schedule: quarterly
+  autofix_commit_msg: "🎨 pre-commit fixes"
   skip: [ty-check]
 
 repos:
-  # Standard hooks
+  # Priority 0: Fast validation and independent fixers
+
+  ## Standard hooks
   - repo: https://github.com/pre-commit/pre-commit-hooks
     rev: v6.0.0
     hooks:
-      - id: check-added-large-files
-        args: ["--maxkb=2048"]
-      - id: check-case-conflict
-      - id: check-vcs-permalinks
       - id: check-merge-conflict
-      - id: check-symlinks
-      - id: check-json
-      - id: check-toml
-      - id: check-yaml
-      - id: debug-statements
+        priority: 0
       - id: end-of-file-fixer
-      - id: mixed-line-ending
+        priority: 1
       - id: trailing-whitespace
+        priority: 1
 
-  # Clean jupyter notebooks
-  - repo: https://github.com/srstevenson/nb-clean
-    rev: 4.0.1
+  ## Check the pyproject.toml file
+  - repo: https://github.com/henryiii/validate-pyproject-schema-store
+    rev: 2026.01.22
     hooks:
-      - id: nb-clean
-        args:
-          - --remove-empty-cells
-          - --preserve-cell-metadata
-          - raw_mimetype
-          - --
-
-  # Handling unwanted unicode characters
-  - repo: https://github.com/sirosen/texthooks
-    rev: 0.7.1
+      - id: validate-pyproject
+        priority: 0
+
+  ## Check JSON schemata
+  - repo: https://github.com/python-jsonschema/check-jsonschema
+    rev: 0.36.0
+    hooks:
+      - id: check-github-workflows
+        priority: 0
+      - id: check-readthedocs
+        priority: 0
+
+  ## Catch common capitalization mistakes
+  - repo: local
     hooks:
-      - id: fix-ligatures
-      - id: fix-smartquotes
+      - id: disallow-caps
+        name: Disallow improper capitalization
+        language: pygrep
+        entry: Nanobind|Numpy|Cmake|CCache|Github|PyTest|Mqt|Tum
+        exclude: .pre-commit-config.yaml
+        priority: 0
 
-  # Check for common mistakes
-  - repo: https://github.com/pre-commit/pygrep-hooks
-    rev: v1.10.0
+  ## Check for spelling
+  - repo: https://github.com/adhtruong/mirrors-typos
+    rev: v1.42.1
     hooks:
-      - id: rst-backticks
-      - id: rst-directive-colons
-      - id: rst-inline-touching-normal
+      - id: typos
+        priority: 0
 
-  # Check for license headers
+  ## Check best practices for scientific Python code
+  - repo: https://github.com/scientific-python/cookie
+    rev: 2025.11.21
+    hooks:
+      - id: sp-repo-review
+        additional_dependencies: ["repo-review[cli]"]
+        priority: 0
+
+  ## Check for license headers
   - repo: https://github.com/emzeat/mz-lictools
     rev: v2.9.0
     hooks:
       - id: license-tools
+        priority: 0
 
-  # Ensure uv lock file is up-to-date
+  ## Ensure uv lock file is up-to-date
   - repo: https://github.com/astral-sh/uv-pre-commit
     rev: 0.9.26
     hooks:
       - id: uv-lock
+        priority: 0
 
-  # Python linting using ruff
-  - repo: https://github.com/astral-sh/ruff-pre-commit
-    rev: v0.14.14
-    hooks:
-      - id: ruff-check
-      - id: ruff-format
-
-  # Also run Black on examples in the documentation
-  - repo: https://github.com/adamchainz/blacken-docs
-    rev: 1.20.0
-    hooks:
-      - id: blacken-docs
-        additional_dependencies: [black==25.*]
-
-  ## Static type checking using ty
-  - repo: local
+  ## Tidy up BibTeX files
+  - repo: https://github.com/FlamingTempura/bibtex-tidy
+    rev: v1.14.0
     hooks:
-      - id: ty-check
-        name: ty check
-        entry: uvx python -c "import subprocess; import sys; r = subprocess.run(['uv', 'sync', '--no-install-project', '--inexact']); sys.exit(r.returncode or subprocess.run(['uv', 'run', '--no-sync', 'ty', 'check']).returncode)"
-        language: unsupported
-        require_serial: true
-        types_or: [python, pyi, jupyter]
-        exclude: ^(docs/|eval/)
+      - id: bibtex-tidy
+        args:
+          [
+            "--align=20",
+            "--curly",
+            "--months",
+            "--blank-lines",
+            "--sort",
+            "--strip-enclosing-braces",
+            "--sort-fields",
+            "--trailing-commas",
+            "--remove-empty-fields",
+          ]
+        priority: 0
 
-  # Check for spelling
-  - repo: https://github.com/adhtruong/mirrors-typos
-    rev: v1.42.1
-    hooks:
-      - id: typos
+  # Priority 1: Second-pass fixers
 
-  # Clang-format the C++ part of the code base automatically
+  ## Clang-format the C++ part of the code base automatically
   - repo: https://github.com/pre-commit/mirrors-clang-format
     rev: v21.1.8
     hooks:
       - id: clang-format
         types_or: [c++, c, cuda]
+        priority: 1
 
-  # CMake format and lint the CMakeLists.txt files
+  ## CMake format and lint the CMakeLists.txt files
   - repo: https://github.com/cheshirekow/cmake-format-precommit
     rev: v0.6.13
     hooks:
       - id: cmake-format
         additional_dependencies: [pyyaml]
         types: [file]
         files: (\.cmake|CMakeLists.txt)(.in)?$
+        priority: 1
 
-  # Format configuration files with prettier
+  ## Format configuration files with prettier
   - repo: https://github.com/rbubley/mirrors-prettier
     rev: v3.8.1
     hooks:
       - id: prettier
         types_or: [yaml, markdown, html, css, scss, javascript, json]
+        priority: 1
 
-  # Catch common capitalization mistakes
-  - repo: local
-    hooks:
-      - id: disallow-caps
-        name: Disallow improper capitalization
-        language: pygrep
-        entry: Nanobind|Numpy|Cmake|CCache|Github|PyTest|Mqt|Tum
-        exclude: .pre-commit-config.yaml
-
-  # Check best practices for scientific Python code
-  - repo: https://github.com/scientific-python/cookie
-    rev: 2025.11.21
+  ## Python linting using ruff
+  - repo: https://github.com/astral-sh/ruff-pre-commit
+    rev: v0.14.14
     hooks:
-      - id: sp-repo-review
-        additional_dependencies: ["repo-review[cli]"]
+      - id: ruff-format
+        priority: 1
+      - id: ruff-check
+        require_serial: true
+        priority: 2
 
-  # Check JSON schemata
-  - repo: https://github.com/python-jsonschema/check-jsonschema
-    rev: 0.36.0
-    hooks:
-      - id: check-dependabot
-      - id: check-github-workflows
-      - id: check-readthedocs
+  # Priority 2+: Final checks and fixers
 
-  # Check the pyproject.toml file
-  - repo: https://github.com/henryiii/validate-pyproject-schema-store
-    rev: 2026.01.22
+  ## Also run Black on examples in the documentation (needs to run after ruff format)
+  - repo: https://github.com/adamchainz/blacken-docs
+    rev: 1.20.0
     hooks:
-      - id: validate-pyproject
+      - id: blacken-docs
+        language: python
+        additional_dependencies: [black==26.*]
+        priority: 2
 
-  # Tidy up BibTeX files
-  - repo: https://github.com/FlamingTempura/bibtex-tidy
-    rev: v1.14.0
+  ## Static type checking using ty (needs to run after lockfile update/ruff format, and ruff lint)
+  - repo: local
     hooks:
-      - id: bibtex-tidy
-        args:
-          [
-            "--align=20",
-            "--curly",
-            "--months",
-            "--blank-lines",
-            "--sort",
-            "--strip-enclosing-braces",
-            "--sort-fields",
-            "--trailing-commas",
-            "--remove-empty-fields",
-          ]
+      - id: ty-check
+        name: ty check
+        entry: uvx python -c "import subprocess; import sys; r = subprocess.run(['uv', 'sync', '--no-install-project', '--inexact']); sys.exit(r.returncode or subprocess.run(['uv', 'run', '--no-sync', 'ty', 'check']).returncode)"
+        language: unsupported
+        require_serial: true
+        types_or: [python, pyi, jupyter]
+        exclude: ^(docs/|eval/)
+        priority: 3

pyproject.toml

@@ -8,10 +8,10 @@
 
 [build-system]
 requires = [
-  "nanobind>=2.10.2",
+  "nanobind~=2.10.2",
   "setuptools-scm>=9.2.2",
   "scikit-build-core>=0.11.6",
-  "mqt.core~=3.4.0",
+  "mqt.core==3.4.0",
 ]
 build-backend = "scikit_build_core.build"
 
@@ -51,7 +51,7 @@ classifiers = [
 ]
 requires-python = ">=3.10, != 3.14.1"
 dependencies = [
-    "mqt.core~=3.4.0",
+    "mqt.core==3.4.0",
     "qiskit[qasm3-import]>=1.0.0",
     "rustworkx[all]>=0.16.0",
     "typing_extensions>=4.6; python_version < '3.11'",
@@ -303,6 +303,7 @@ ignore = [
   "MY100", # We use ty instead of mypy
   "PC140", # We use ty instead of mypy
   "PC160", # We use a mirror of crate-ci/typos
+  "PC170", # We do not use rST files anymore
 ]
 
 
@@ -384,10 +385,10 @@ exclude = [
 
 [dependency-groups]
 build = [
-  "nanobind>=2.10.2",
+  "nanobind~=2.10.2",
   "setuptools-scm>=9.2.2",
   "scikit-build-core>=0.11.6",
-  "mqt.core~=3.4.0",
+  "mqt.core==3.4.0",
 ]
 docs = [
   "distinctipy>=1.3.4",