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@nmfs-ost

Office of Science & Technology at NOAA Fisheries

Providing the science behind how we manage sustainable fisheries, protected species, and healthy ecosystems.

NOAA Fisheries - Office of Science and Technology

This GitHub organization is for members of the Office of Science and Technology (OST) and their collaborators. It also houses repositories for the Office of Protected Resources (OPR) and NOAA Fisheries Advanced Technologies Strategic Initiatives.

How to find repositories?

Click on repositories tab and search for a topic (stock-assessment, ggt, etc.) or program (e.g. the national stock assessment program, NSAP).

Topics or repository prefixes denoting specific collections of repositories include:

  • AA - Active Acoustics
  • FIT - The NOAA Fisheries Integrated Toolbox
  • pam - Passive Acoustics Monitoring
  • stock-synthesis

I'm NOAA staff - how do I request write access to this organization?

See the GitHub Governance Team intranet (NOAA internal only) for instructions.

Disclaimer

The repositories in this GitHub org are scientific products and are not official communication of the National Oceanic and Atmospheric Administration, or the United States Department of Commerce. All NOAA GitHub project code is provided on an ‘as is’ basis and the user assumes responsibility for its use. Any claims against the Department of Commerce or Department of Commerce bureaus stemming from the use of this GitHub project will be governed by all applicable Federal law. Any reference to specific commercial products, processes, or services by service mark, trademark, manufacturer, or otherwise, does not constitute or imply their endorsement, recommendation or favoring by the Department of Commerce. The Department of Commerce seal and logo, or the seal and logo of a DOC bureau, shall not be used in any manner to imply endorsement of any commercial product or activity by DOC or the United States Government

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  1. ss3-source-code ss3-source-code Public

    The source code for Stock Synthesis (SS3).

    C++ 43 20

  2. ss3-doc ss3-doc Public

    Source code for the Stock Synthesis manual and other documentation

    TeX 3 3

  3. ss3-user-examples ss3-user-examples Public

    Stock synthesis example models for users

    Scheme 2 5

  4. ss3-test-models ss3-test-models Public

    Stock Synthesis models used for testing

    Scheme 3 1

  5. ss3-ssi ss3-ssi Public

    The source code for Stock Synthesis Interface (SSI), the Stock Synthesis GUI

    C++ 2

Repositories

Showing 10 of 100 repositories
  • agepro-ref-manual Public

    Quatro Documentation of the AGEPRO Reference Manual

    nmfs-ost/agepro-ref-manual’s past year of commit activity
    TeX 0 0 1 0 Updated Jan 10, 2026
  • AA-SI_Calibration Public

    Calibration routines, formats, and information

    nmfs-ost/AA-SI_Calibration’s past year of commit activity
    0 Apache-2.0 0 0 0 Updated Jan 9, 2026
  • stockplotr Public

    R package that contains general tables and figures such as standard objects in an assessment report, and other important visualizations to interpret results of stock assessment models.

    nmfs-ost/stockplotr’s past year of commit activity
    R 8 5 16 3 Updated Jan 9, 2026
  • asar Public

    Partially automate a U.S. stock assessment report.

    nmfs-ost/asar’s past year of commit activity
    TeX 32 MIT 10 11 (1 issue needs help) 3 Updated Jan 9, 2026
  • PAM-Glider Public

    Summary of NOAA Fisheries PAM equipped Glider Research.

    nmfs-ost/PAM-Glider’s past year of commit activity
    Lua 1 CC0-1.0 1 18 (1 issue needs help) 0 Updated Jan 9, 2026
  • nmfs-ost/workflows-guidebook’s past year of commit activity
    Lua 2 CC0-1.0 0 0 1 Updated Jan 9, 2026
  • PAM-acodet-batchScale Public Forked from vskode/acodet

    automatic detection of vocalizing animals in acoustic datasets

    nmfs-ost/PAM-acodet-batchScale’s past year of commit activity
    Python 0 MIT 2 0 12 Updated Jan 9, 2026
  • workflows-workshop Public

    Home to the agenda, materials, and communication for the stock assessment workflows workshops being held starting in 2026.

    nmfs-ost/workflows-workshop’s past year of commit activity
    HTML 2 CC0-1.0 0 17 0 Updated Jan 7, 2026
  • AA-SI_echoSMs Public

    Acoustic scattering models for fish and plankton

    nmfs-ost/AA-SI_echoSMs’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Jan 7, 2026
  • AA-SI_aalibrary Public

    A python library used for fetching acoustics data.

    nmfs-ost/AA-SI_aalibrary’s past year of commit activity
    Python 5 Apache-2.0 2 0 0 Updated Jan 7, 2026

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This organization has no public members. You must be a member to see who’s a part of this organization.

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