Add study cell#40

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pendingintent merged 34 commits intomasterfrom

Dec 11, 2025

Commits on Dec 11, 2025

Transition rule endpoints fixed; HTMX added
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Fixed element audits, added element audit viewer
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Update src/soa_builder/web/initialize_database.py

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Removed duplicate helpers and moved to utils
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Update src/soa_builder/web/initialize_database.py

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Update src/soa_builder/web/templates/edit.html

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Update src/soa_builder/web/templates/protocol_terminology.html

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Update src/soa_builder/web/templates/edit.html

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Removed the unrelated Element Audit HTMX block from ui_refresh_concepts in app.py
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Removed the Element Audit HTMX block from ui_add_activity in app.py
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emoved the unrelated Element Audit HTMX block from ui_update_meta in app.py
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Update src/soa_builder/web/templates/edit.html

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Removed duplicated code block for fetching element audits
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Merge branch 'add-study-cell' of https://github.com/pendingintent/soa-workbench into add-study-cell
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Update src/soa_builder/web/templates/edit.html

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Update src/soa_builder/web/app.py

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simplify the element delete query to avoid selecting NULL as element_id and handle missing element_id
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replaced all _soa_exists usages in app.py with the shared soa_exists from utils and removed the local _soa_exists helper
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Update src/soa_builder/web/templates/protocol_terminology.html

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Update src/soa_builder/web/templates/ddf_terminology.html

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Update src/soa_builder/web/routers/elements.py

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Added uniform logging to database-facing helpers and validated
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Standardized loggers, prevent exception swallowing
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