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Add tutorial notebook showcasing coefficient computation and metadata correlation#24

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haoyu-zc merged 10 commits intomainfrom
manuscript-supp-data
Sep 25, 2025
Merged

Add tutorial notebook showcasing coefficient computation and metadata correlation#24
haoyu-zc merged 10 commits intomainfrom
manuscript-supp-data

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@haoyu-zc haoyu-zc commented Sep 25, 2025

You can try out notebook nbs/99-tutorials/05-walkthrough-with-gtex-data.ipynb to see if it works well

The notebook walks through:

  1. Gtex data downloading and preprocessing
  2. CCC, Spearman, Pearson calculation for a single gene pair
  3. Metadata correlation

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@haoyu-zc haoyu-zc requested a review from miltondp September 25, 2025 19:16
@haoyu-zc haoyu-zc merged commit bfd7e78 into main Sep 25, 2025
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