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Y25-582 - [PR] Check study data uploaded to the EBI EGA & ENA datab…#5471

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yoldas wants to merge 5 commits intodevelopfrom
y25-582-check-study-and-sample-data-uploaded-to-the-ebi-ega-and-ena-databases
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Y25-582 - [PR] Check study data uploaded to the EBI EGA & ENA datab…#5471
yoldas wants to merge 5 commits intodevelopfrom
y25-582-check-study-and-sample-data-uploaded-to-the-ebi-ega-and-ena-databases

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@yoldas yoldas commented Jan 20, 2026

…ases

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[All PRs] - Confirm PR template filled
[Feature Branches] - Review code
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    - Check story numbers included
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codecov bot commented Jan 20, 2026

Codecov Report

❌ Patch coverage is 55.71429% with 93 lines in your changes missing coverage. Please review.
✅ Project coverage is 87.27%. Comparing base (fd3e418) to head (1d3e835).
⚠️ Report is 229 commits behind head on develop.

Files with missing lines Patch % Lines
lib/ebi_check/process.rb 37.50% 55 Missing ⚠️
lib/tasks/ebi_check.rake 13.51% 32 Missing ⚠️
lib/ebi_check/utils.rb 86.04% 0 Missing and 6 partials ⚠️
Additional details and impacted files
@@             Coverage Diff             @@
##           develop    #5471      +/-   ##
===========================================
+ Coverage    87.21%   87.27%   +0.05%     
===========================================
  Files         1459     1463       +4     
  Lines        32697    33254     +557     
  Branches      3421     3532     +111     
===========================================
+ Hits         28517    29022     +505     
- Misses        4166     4212      +46     
- Partials        14       20       +6     

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@yoldas yoldas force-pushed the y25-582-check-study-and-sample-data-uploaded-to-the-ebi-ega-and-ena-databases branch from cd43571 to 038d2b4 Compare January 30, 2026 08:56
@yoldas yoldas force-pushed the y25-582-check-study-and-sample-data-uploaded-to-the-ebi-ega-and-ena-databases branch from f4a3e92 to 1d3e835 Compare January 30, 2026 09:37
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yoldas commented Feb 2, 2026

closing in favour of #5510

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