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Merged
Neclow merged 1 commit into from
Jan 26, 2026
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docs: add missing functions to API reference #182

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20 changes: 15 additions & 5 deletions docs/api.rst
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Original file line number Diff line number Diff line change
Expand Up @@ -10,10 +10,14 @@ Base
:nosignatures:
:toctree: generated/

from_newick
to_newick
from_ancestry
from_edges
from_newick
from_pairs
to_ancestry
to_edges
to_newick
to_pairs

IO
----------------
Expand All @@ -36,10 +40,11 @@ Statistics
:toctree: generated/

stats.cophenetic_distances
stats.pairwise_distances
stats.cov
stats.precision
stats.incidence
stats.pairwise_distances
stats.precision
stats.robinson_foulds

Utils
----------------
Expand All @@ -56,7 +61,12 @@ Utils
utils.newick.find_num_leaves
utils.newick.remove_branch_lengths
utils.newick.remove_parent_labels
utils.vector.check_vector
utils.vector.add_leaf
utils.vector.check_vector
utils.vector.get_common_ancestor
utils.vector.get_node_depth
utils.vector.get_node_depths
utils.vector.queue_shuffle
utils.vector.remove_leaf
utils.vector.reroot
utils.vector.reroot_at_random