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Foundation model for different tasks related to analysis of brain anatomy.

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BrainNet

Foundation model for different tasks related to analysis of brain anatomy.

Configuration

Currently, the CUDA extension is not build as part of the package installation and so needs to be build manually. To do this, cd into /brainnet/mesh/cuda and execute python build.py build_ext --inplace (having installed the proper CUDA libraries, torch, etc.)

# get cuda version used to compile torch
python -c "import torch; print(torch.version.cuda)"

# and use this here
conda install -c conda-forge cudatoolkit-dev=[torch.version.cuda]

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Foundation model for different tasks related to analysis of brain anatomy.

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