regenie

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A nextflow pipeline to perform state-of-the-art genome-wide association studies.

gwas nextflow slurm singularity imputation regenie

Run AlphaGenome on DecodeME GWAS summary statistics files or those from other studies using regenie format

gwas bioinformatics-tool regenie decodeme alphagenome

Recipe for building an Apptainer to run Regenie

genomics hpc containerized-applications gwas-tools regenie

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