Skip to content
Scott Kirkland edited this page Jul 20, 2021 · 1 revision

Welcome to the cecdss-spatial-analysis wiki!

Running Rscript on slurm example:

#!/bin/bash -l

# setting name of job
#SBATCH --job-name=testR

# setting home directory
#SBATCH -D /home/xyz/testing

# standard out and Standard Error output files with the job number in the name.
#SBATCH -o slurm-dataprep-%j.output
#SBATCH -e slurm-dataprep-%j.output

# setting medium priority
#SBATCH -p med

# setting the max time
#SBATCH -t 0:10:00

# now running the actual script!

# load R
module load R

srun Rscript test.R

Clone this wiki locally