Important: do not rely on the API until the stable version 1.0 is released as it is still subject to change!
This is a collection of image and data analysis algorithms used in ThunderSTORM. We provide the algorithms as a separate light-weight library for better reusability.
ThunderSTORM is an open-source, interactive, and modular plug-in for ImageJ designed for automated processing, analysis, and visualization of data acquired by single molecule localization microscopy methods such as PALM and STORM. Our philosophy in developing ThunderSTORM has been to offer an extensive collection of processing and post-processing methods so that users can easily adapt the process of analysis to their data.
Currently the most simple approach to link our library to your project is using JitPack. Look here for the instructions.
If you use ThunderSTORM or any of its components to process your data, please, cite our paper:
- M. Ovesný, P. Křížek, J. Borkovec, Z. Švindrych, G. M. Hagen. ThunderSTORM: a comprehensive ImageJ plugin for PALM and STORM data analysis and super-resolution imaging. Bioinformatics 30(16):2389-2390, 2014.