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9 changes: 7 additions & 2 deletions python/sdist/amici/sbml_import.py
Original file line number Diff line number Diff line change
Expand Up @@ -3132,13 +3132,18 @@ def _parse_event_trigger(trigger: sp.Expr) -> sp.Expr:
Recursively translates a boolean trigger function into a real valued
root function

:param trigger:
:return: real valued root function expression
:param trigger: The Boolean trigger expression.
The event triggers when this expression changes from False to True.
:return: real-valued root function expression
"""
# Events can be defined without trigger, i.e., the event will never fire.
# In this case, set a dummy trigger:
if trigger is None or trigger is sp.false:
return sp.Float(-1.0)

if trigger is sp.true:
return sp.Float(1.0)

if trigger.is_Relational:
root = trigger.args[0] - trigger.args[1]
_check_unsupported_functions_sbml(root, "sympy.Expression")
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17 changes: 17 additions & 0 deletions python/tests/test_sbml_import.py
Original file line number Diff line number Diff line change
Expand Up @@ -17,6 +17,7 @@
from amici import import_model_module
from amici.testing import TemporaryDirectoryWinSafe as TemporaryDirectory
from conftest import MODEL_STEADYSTATE_SCALED_XML
import sympy as sp


def simple_sbml_model():
Expand All @@ -41,6 +42,22 @@ def simple_sbml_model():
return document, model


def test_event_trigger_to_root_function():
"""Test that root functions for event triggers are generated correctly."""
from amici.sbml_import import _parse_event_trigger as to_trig

a, b = sp.symbols("a b")

assert to_trig(None) == sp.Float(-1)
assert to_trig(sp.false) == sp.Float(-1)
assert to_trig(sp.true) == sp.Float(1)

assert to_trig(a > b) == a - b
assert to_trig(a >= b) == a - b
assert to_trig(a < b) == b - a
assert to_trig(a <= b) == b - a


def test_sbml2amici_no_observables(tempdir):
"""Test model generation works for model without observables"""
sbml_doc, sbml_model = simple_sbml_model()
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